Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
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Accession | NC_007514 |
Length | 2,572,079 |
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The map label for this gene is 78188383
Identifier: 78188383
GI number: 78188383
Start: 471075
End: 472274
Strand: Reverse
Name: 78188383
Synonym: Cag_0405
Alternate gene names: NA
Gene position: 472274-471075 (Counterclockwise)
Preceding gene: 78188384
Following gene: 78188382
Centisome position: 18.36
GC content: 42.25
Gene sequence:
>1200_bases ATGAAAAAAGCTGCTTTTCTTGTTGCTTTAGCTGCCCTTTTTGGCGGAACCCAAGCCAATGCTACCGATTGGAATTGGAA GGGTGATGTACGATATCGCTATCAATCCGATTTAGCCTCCGATCCAGCAGTAACGGGTGAAAACAGTCGCGATCGCCATC GTACTCGCGTTCGTCTTGGTGTATATCCATGGATTAGCGAAGAACTGACCGGTGGTCTGCAATTTTCAACGGCTGGTGCA GGCGATGAAACAACATCACGTAATGAAACTTTTGGCGATCAATTTGTACCCGATCAGCTCTATTTGAACGAAGCTTTTAT CAATTTCCATCCTAAAGCCTTCGACAGCAAAGTTAACATCATTCTTGGTAAGCGTGAAGTAGCTAATACTATGGTGGTGT TAAGCGACTTAGTGTGGGATGGCGACCTTACCTTTGAAGGTATGACGCTGCAATATGGTAAAGATGAAAATGGTAAAAAT AAAGATGGATGGAATGCTATGCTTGGCTACTATCCATTAAATGAAATTAATGATCTAAAAGAGGTAAAAGCACAAGATGC CTATCTTTTAGCTGGGCAAGTTGCCTATAAAGGCAAAACAAGTGCGGTAACATATCATATGGGTGCTGGTTATTACGACT ATACTCATTTTGATGTAAGCAATAAAAAGGTAAATGCGAGCCAATTAGCAGCAGCTCCTTATACTTATACTGCGGCTAAA AGTGCTACATACTCACCTGAATACGATTACACAGGCAAAGATTTCAATATCATTGAATTGTTTGGAACGGTGGGTGGCAA GTTAACCGAAAACACACCATGGACGCTCACCTTGCAATATGCCTTTAATACGGCAAAGCAAGATGCCAAGCACATCAACA TTGATGATGATGAACGTACCAGCTACTTAGCAGGCGTTAAGATTGGTGATGCCAAAAATGTTGGACAATGGGCAGTTGGT GCCGATTACGTTCGCATTGAAAAAGATGCTATGACGGTACTCACCGATTCTGATCGCAATGGTGGAACTGCCACAAATCT TGAAGGCATGAAGCTTGGTGTTACCTACCACATGGTAAAAAACATGACGGTTGGGGCAACCTACTTTAACTTCAACACCA TTGATAACGATGCAACGGCTGTTGATGAATCTGCTACAAAACGCCACACCCTTATGCTTGATACGGTTGTTAAATTCTAA
Upstream 100 bases:
>100_bases AATATTGCTATACTATTTCTATAAAAATTATATAGGTAAGAATAATAGAATAGCAAGTGCAGAAAAGAATTTTATTGCCA ACTCAACTCAATTCATTTTT
Downstream 100 bases:
>100_bases AACCGTAACTGAACGCTGCTTTTTACCCTGTTCTTTGTGTGTTGTGTAATAAGTTGAGCAAGGCTTTTTCACTTGAAAAA GCCTTGCTTTAACTTACTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MKKAAFLVALAALFGGTQANATDWNWKGDVRYRYQSDLASDPAVTGENSRDRHRTRVRLGVYPWISEELTGGLQFSTAGA GDETTSRNETFGDQFVPDQLYLNEAFINFHPKAFDSKVNIILGKREVANTMVVLSDLVWDGDLTFEGMTLQYGKDENGKN KDGWNAMLGYYPLNEINDLKEVKAQDAYLLAGQVAYKGKTSAVTYHMGAGYYDYTHFDVSNKKVNASQLAAAPYTYTAAK SATYSPEYDYTGKDFNIIELFGTVGGKLTENTPWTLTLQYAFNTAKQDAKHINIDDDERTSYLAGVKIGDAKNVGQWAVG ADYVRIEKDAMTVLTDSDRNGGTATNLEGMKLGVTYHMVKNMTVGATYFNFNTIDNDATAVDESATKRHTLMLDTVVKF
Sequences:
>Translated_399_residues MKKAAFLVALAALFGGTQANATDWNWKGDVRYRYQSDLASDPAVTGENSRDRHRTRVRLGVYPWISEELTGGLQFSTAGA GDETTSRNETFGDQFVPDQLYLNEAFINFHPKAFDSKVNIILGKREVANTMVVLSDLVWDGDLTFEGMTLQYGKDENGKN KDGWNAMLGYYPLNEINDLKEVKAQDAYLLAGQVAYKGKTSAVTYHMGAGYYDYTHFDVSNKKVNASQLAAAPYTYTAAK SATYSPEYDYTGKDFNIIELFGTVGGKLTENTPWTLTLQYAFNTAKQDAKHINIDDDERTSYLAGVKIGDAKNVGQWAVG ADYVRIEKDAMTVLTDSDRNGGTATNLEGMKLGVTYHMVKNMTVGATYFNFNTIDNDATAVDESATKRHTLMLDTVVKF >Mature_399_residues MKKAAFLVALAALFGGTQANATDWNWKGDVRYRYQSDLASDPAVTGENSRDRHRTRVRLGVYPWISEELTGGLQFSTAGA GDETTSRNETFGDQFVPDQLYLNEAFINFHPKAFDSKVNIILGKREVANTMVVLSDLVWDGDLTFEGMTLQYGKDENGKN KDGWNAMLGYYPLNEINDLKEVKAQDAYLLAGQVAYKGKTSAVTYHMGAGYYDYTHFDVSNKKVNASQLAAAPYTYTAAK SATYSPEYDYTGKDFNIIELFGTVGGKLTENTPWTLTLQYAFNTAKQDAKHINIDDDERTSYLAGVKIGDAKNVGQWAVG ADYVRIEKDAMTVLTDSDRNGGTATNLEGMKLGVTYHMVKNMTVGATYFNFNTIDNDATAVDESATKRHTLMLDTVVKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44214; Mature: 44214
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAAFLVALAALFGGTQANATDWNWKGDVRYRYQSDLASDPAVTGENSRDRHRTRVRLG CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEE VYPWISEELTGGLQFSTAGAGDETTSRNETFGDQFVPDQLYLNEAFINFHPKAFDSKVNI ECCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEE ILGKREVANTMVVLSDLVWDGDLTFEGMTLQYGKDENGKNKDGWNAMLGYYPLNEINDLK EEECHHHHHHHEEEHHHEECCCEEEECEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHH EVKAQDAYLLAGQVAYKGKTSAVTYHMGAGYYDYTHFDVSNKKVNASQLAAAPYTYTAAK HHHCCCEEEEEEEEEECCCCCEEEEECCCCEEEEEEEECCCCEECHHHHCCCCEEEECCC SATYSPEYDYTGKDFNIIELFGTVGGKLTENTPWTLTLQYAFNTAKQDAKHINIDDDERT CCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCC SYLAGVKIGDAKNVGQWAVGADYVRIEKDAMTVLTDSDRNGGTATNLEGMKLGVTYHMVK EEEEEEEECCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEC NMTVGATYFNFNTIDNDATAVDESATKRHTLMLDTVVKF CEEEEEEEEEEECCCCCCHHCCCCCCHHHEEEEEHHHCC >Mature Secondary Structure MKKAAFLVALAALFGGTQANATDWNWKGDVRYRYQSDLASDPAVTGENSRDRHRTRVRLG CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEE VYPWISEELTGGLQFSTAGAGDETTSRNETFGDQFVPDQLYLNEAFINFHPKAFDSKVNI ECCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEE ILGKREVANTMVVLSDLVWDGDLTFEGMTLQYGKDENGKNKDGWNAMLGYYPLNEINDLK EEECHHHHHHHEEEHHHEECCCEEEECEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHH EVKAQDAYLLAGQVAYKGKTSAVTYHMGAGYYDYTHFDVSNKKVNASQLAAAPYTYTAAK HHHCCCEEEEEEEEEECCCCCEEEEECCCCEEEEEEEECCCCEECHHHHCCCCEEEECCC SATYSPEYDYTGKDFNIIELFGTVGGKLTENTPWTLTLQYAFNTAKQDAKHINIDDDERT CCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCC SYLAGVKIGDAKNVGQWAVGADYVRIEKDAMTVLTDSDRNGGTATNLEGMKLGVTYHMVK EEEEEEEECCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEC NMTVGATYFNFNTIDNDATAVDESATKRHTLMLDTVVKF CEEEEEEEEEEECCCCCCHHCCCCCCHHHEEEEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA