Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
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Accession | NC_007514 |
Length | 2,572,079 |
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The map label for this gene is folE
Identifier: 78188350
GI number: 78188350
Start: 428716
End: 429387
Strand: Reverse
Name: folE
Synonym: Cag_0372
Alternate gene names: 78188350
Gene position: 429387-428716 (Counterclockwise)
Preceding gene: 78188351
Following gene: 78188346
Centisome position: 16.69
GC content: 47.47
Gene sequence:
>672_bases ATGAAACAGGAAAAAACGCCGTCCGCTATTACGGAGAATAAGCTACCGTTTTCCTCATCCAATTGCGGATGCGGCTGCCA CAATGATGATGATACACTAACGCATGATGACGGATTGCTGACTGACAACTTAGAATCTGCCGTTTACACCATGCTGCAAA ACGTGGGTGAAGATCCCCAGCGTGAAGGGTTGCTAAAAACCCCTGAGCGCGTTGCACGCTCCATGCGCTTTCTTACCAAA GGGTATCACGAAAACCCCGAAGAGCTGTTACAAAAAGCCCTCTTTACCGAAAGCTATGACGAAATGGTATTAGTGCGCGA TATTGATCTTTTTTCGATGTGCGAGCACCACATGCTTCCCTTTTTTGGCAAAGCCCACGTAGCATACATTCCCGATGGCA AAATTGTAGGACTTTCAAAGCTTGCCCGTGTGGTTGAAGTTTTTTCGCGCCGACTACAAGTGCAAGAGCGCCTAACGCAG CAAATTCGTGATGCAATTCAAAACGTGCTGAATCCCAAAGGCGTTGCTGTGGTTATTGAGGCAAAGCACCTTTGCATGGT AATGCGTGGCGTTGAAAAGCTCAATTCCATTACCACAACCTCCGCGATGTCGGGCGTTTTTATGACCTCACCGTCAACAC GCGGCGAGTTTTTGCGCTTAATCCAAAAATAA
Upstream 100 bases:
>100_bases ATTCCTACAACCGAAATACTTGCGGTGTTAATATGGGATATTCTTGCCCAACGTTTTACAACCATTAACCCCGCAATAAC CCTCCACGAAGTTCACCTTT
Downstream 100 bases:
>100_bases AAAATGGATGGTGGAAAGAGCTGCAACACCAACGGCTCTTTCCTCTCTCTTTGTTGCACCTCAACATGATATGCTTGGTA AGCACAAAAGAAAAAGACAA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MKQEKTPSAITENKLPFSSSNCGCGCHNDDDTLTHDDGLLTDNLESAVYTMLQNVGEDPQREGLLKTPERVARSMRFLTK GYHENPEELLQKALFTESYDEMVLVRDIDLFSMCEHHMLPFFGKAHVAYIPDGKIVGLSKLARVVEVFSRRLQVQERLTQ QIRDAIQNVLNPKGVAVVIEAKHLCMVMRGVEKLNSITTTSAMSGVFMTSPSTRGEFLRLIQK
Sequences:
>Translated_223_residues MKQEKTPSAITENKLPFSSSNCGCGCHNDDDTLTHDDGLLTDNLESAVYTMLQNVGEDPQREGLLKTPERVARSMRFLTK GYHENPEELLQKALFTESYDEMVLVRDIDLFSMCEHHMLPFFGKAHVAYIPDGKIVGLSKLARVVEVFSRRLQVQERLTQ QIRDAIQNVLNPKGVAVVIEAKHLCMVMRGVEKLNSITTTSAMSGVFMTSPSTRGEFLRLIQK >Mature_223_residues MKQEKTPSAITENKLPFSSSNCGCGCHNDDDTLTHDDGLLTDNLESAVYTMLQNVGEDPQREGLLKTPERVARSMRFLTK GYHENPEELLQKALFTESYDEMVLVRDIDLFSMCEHHMLPFFGKAHVAYIPDGKIVGLSKLARVVEVFSRRLQVQERLTQ QIRDAIQNVLNPKGVAVVIEAKHLCMVMRGVEKLNSITTTSAMSGVFMTSPSTRGEFLRLIQK
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family
Homologues:
Organism=Homo sapiens, GI66932968, Length=204, Percent_Identity=54.9019607843137, Blast_Score=241, Evalue=5e-64, Organism=Homo sapiens, GI4503949, Length=204, Percent_Identity=54.9019607843137, Blast_Score=241, Evalue=5e-64, Organism=Homo sapiens, GI66932970, Length=178, Percent_Identity=50, Blast_Score=189, Evalue=2e-48, Organism=Homo sapiens, GI66932972, Length=163, Percent_Identity=52.760736196319, Blast_Score=189, Evalue=2e-48, Organism=Escherichia coli, GI1788476, Length=176, Percent_Identity=43.1818181818182, Blast_Score=126, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17560486, Length=218, Percent_Identity=55.045871559633, Blast_Score=243, Evalue=8e-65, Organism=Saccharomyces cerevisiae, GI6321706, Length=181, Percent_Identity=53.5911602209945, Blast_Score=208, Evalue=7e-55, Organism=Drosophila melanogaster, GI24656796, Length=214, Percent_Identity=51.8691588785047, Blast_Score=213, Evalue=6e-56, Organism=Drosophila melanogaster, GI24656782, Length=213, Percent_Identity=52.112676056338, Blast_Score=213, Evalue=7e-56, Organism=Drosophila melanogaster, GI24656791, Length=225, Percent_Identity=51.1111111111111, Blast_Score=213, Evalue=8e-56,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): GCH1_CHLCH (Q3ATN0)
Other databases:
- EMBL: CP000108 - RefSeq: YP_378688.1 - ProteinModelPortal: Q3ATN0 - SMR: Q3ATN0 - STRING: Q3ATN0 - GeneID: 3748017 - GenomeReviews: CP000108_GR - KEGG: cch:Cag_0372 - eggNOG: COG0302 - HOGENOM: HBG370191 - OMA: YALEPRE - ProtClustDB: PRK09347 - BioCyc: CCHL340177:CAG_0372-MONOMER - GO: GO:0005737 - HAMAP: MF_00223 - InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 - TIGRFAMs: TIGR00063
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =3.5.4.16
Molecular weight: Translated: 25103; Mature: 25103
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQEKTPSAITENKLPFSSSNCGCGCHNDDDTLTHDDGLLTDNLESAVYTMLQNVGEDPQ CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCHH REGLLKTPERVARSMRFLTKGYHENPEELLQKALFTESYDEMVLVRDIDLFSMCEHHMLP HCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCC FFGKAHVAYIPDGKIVGLSKLARVVEVFSRRLQVQERLTQQIRDAIQNVLNPKGVAVVIE CCCCCEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEH AKHLCMVMRGVEKLNSITTTSAMSGVFMTSPSTRGEFLRLIQK HHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCC >Mature Secondary Structure MKQEKTPSAITENKLPFSSSNCGCGCHNDDDTLTHDDGLLTDNLESAVYTMLQNVGEDPQ CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCHH REGLLKTPERVARSMRFLTKGYHENPEELLQKALFTESYDEMVLVRDIDLFSMCEHHMLP HCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCC FFGKAHVAYIPDGKIVGLSKLARVVEVFSRRLQVQERLTQQIRDAIQNVLNPKGVAVVIE CCCCCEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEH AKHLCMVMRGVEKLNSITTTSAMSGVFMTSPSTRGEFLRLIQK HHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA