Click here to switch to the map view.

The map label for this gene is 78188237

Identifier: 78188237

GI number: 78188237

Start: 286558

End: 287061

Strand: Reverse

Name: 78188237

Synonym: Cag_0256

Alternate gene names: NA

Gene position: 287061-286558 (Counterclockwise)

Preceding gene: 78188238

Following gene: 78188235

Centisome position: 11.16

GC content: 36.71

Gene sequence:

>504_bases
ATGATAGATGTTAAGCCATTCGAGAATTGTGTATGCCAAAAGATGAATAATCATCTTTCTTTATGTAAATCAGAACTCAC
ATTATCTGAAAAAGGCAAGAGTGTAACGCTACGAATACGTTCGAGCGAAGAAGCAAAAGTCCTCGTTCTGGATGGCTGCG
TTTTTATGGACAATAGTTCGAGGTGTGATGGATTATATCTCTATAAAAAAGGGAATAAACGCTATGCTTTGTTAGTTGAA
CTGAAAGGAGCTTGCGATATTCCACATGGTTTTGAACAGTTAGCTTACGTTAAAAAAAATCGGCAGGAATATCGTCAAAT
TGTCGATCATTTTTGGGTAGAAGCTGGTGGTGTGCAACCAATTGAAAAAGCCTTTCTTGTTAGCAATGGTTCATTAAGTA
AACCAGATTTAGAGACGTTAGAAAAGCAACACAATATACGAGTTACTGCAATATTGCATTGCGAGGCAACATCCCAGATT
CCTGATTTAAGGAAATATCTTTAA

Upstream 100 bases:

>100_bases
ATAACGATGTTGCATTGCTTGATGATAAGTTGTTAGAATATTTTAACTCCCAAAATCAACTTTACGATAAAATGCGAGAT
CTTGAATGGGAGCATAAAGG

Downstream 100 bases:

>100_bases
CCATCATTTTTCCCCCTCCTCCGCACATTCTCCTCTACAGCCCGTGCATTACGTTTCAGTCGGCGCAACCCTATGCGAAA
AACGGGCGTGCCATAAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MIDVKPFENCVCQKMNNHLSLCKSELTLSEKGKSVTLRIRSSEEAKVLVLDGCVFMDNSSRCDGLYLYKKGNKRYALLVE
LKGACDIPHGFEQLAYVKKNRQEYRQIVDHFWVEAGGVQPIEKAFLVSNGSLSKPDLETLEKQHNIRVTAILHCEATSQI
PDLRKYL

Sequences:

>Translated_167_residues
MIDVKPFENCVCQKMNNHLSLCKSELTLSEKGKSVTLRIRSSEEAKVLVLDGCVFMDNSSRCDGLYLYKKGNKRYALLVE
LKGACDIPHGFEQLAYVKKNRQEYRQIVDHFWVEAGGVQPIEKAFLVSNGSLSKPDLETLEKQHNIRVTAILHCEATSQI
PDLRKYL
>Mature_167_residues
MIDVKPFENCVCQKMNNHLSLCKSELTLSEKGKSVTLRIRSSEEAKVLVLDGCVFMDNSSRCDGLYLYKKGNKRYALLVE
LKGACDIPHGFEQLAYVKKNRQEYRQIVDHFWVEAGGVQPIEKAFLVSNGSLSKPDLETLEKQHNIRVTAILHCEATSQI
PDLRKYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19005; Mature: 19005

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDVKPFENCVCQKMNNHLSLCKSELTLSEKGKSVTLRIRSSEEAKVLVLDGCVFMDNSS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEECEEEECCCC
RCDGLYLYKKGNKRYALLVELKGACDIPHGFEQLAYVKKNRQEYRQIVDHFWVEAGGVQP
CCCEEEEEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
IEKAFLVSNGSLSKPDLETLEKQHNIRVTAILHCEATSQIPDLRKYL
HHHEEEECCCCCCCCCHHHHHHHCCEEEEEEEEECCCCCCCHHHHCC
>Mature Secondary Structure
MIDVKPFENCVCQKMNNHLSLCKSELTLSEKGKSVTLRIRSSEEAKVLVLDGCVFMDNSS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEECEEEECCCC
RCDGLYLYKKGNKRYALLVELKGACDIPHGFEQLAYVKKNRQEYRQIVDHFWVEAGGVQP
CCCEEEEEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
IEKAFLVSNGSLSKPDLETLEKQHNIRVTAILHCEATSQIPDLRKYL
HHHEEEECCCCCCCCCHHHHHHHCCEEEEEEEEECCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA