Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is 78067595
Identifier: 78067595
GI number: 78067595
Start: 3269853
End: 3270488
Strand: Direct
Name: 78067595
Synonym: Bcep18194_A6126
Alternate gene names: NA
Gene position: 3269853-3270488 (Clockwise)
Preceding gene: 78067594
Following gene: 78067598
Centisome position: 88.51
GC content: 66.19
Gene sequence:
>636_bases ATGTCCTCCCTATCGACCACCCTGATCGACCTGCCGCTGTTTCCGCTGCACACGGTGCTGTTTCCGGGGGGCCTGCTCCC GCTCAAGGTGTTCGAGGCGCGCTATCTCGACATGTCCCGCGCGTGCCTGCGCGACAATGCACCGTTCGGCGTATGCCTGC TGAAGAGCGGGCCGGAAGTCGCGCAGGACGGCGCGGTGTCGGTGCCCGAAACCATCGGCTGCATGGCGCGCATCACCGAA TGCGATACCGGTGAATTCGGCATGCTGTACCTGCAGGCGGTCGGCACGCAGCGTTTCGAGCTGCTGTCGTATCGCGTCGA AGGCAACGGGCTGCTGGTCGGCATCGCGGAGCCGCTGCCCGACGACATCCCGCTCGAAGGCGAGCAGACGCTCGCGCAAT TCGGCTCGTGCGCCGAGGTGCTCGAGCGCATCATCGCCGCACTGAAGAAGACCGATCCGGAGAAAATGCCGTTCGGCGAA CCGTTCCGCCTCGACGATCCGAGCTGGGTGTCGAACCGTCTCGCGGAACTGCTGCCGCTCGACCTGCGCGCGCGGCAGAA GCTGATGGAGTTTCCGGACGTCGGCGCGCGCATCGACGCCGTGCACCACGTGCTCGACCGGCACGGCTGGTTATAG
Upstream 100 bases:
>100_bases CGTGCGGCATCGTGATGCGCCAGTGGATGTCGACGCGTCGTCGCGGCTCGTCTCCGAGGTCGACCGACCCTAGCGACACC CGCCCCTTCATCAGCGCGCC
Downstream 100 bases:
>100_bases GCGCCTCGGACCTTTCGCTTCCCGCGAGCCATCCGGGAGGGGGCGTCTCACGAGCGGCTTCCTTCCAAGCGAAAGACCGG GTCGGCGTTTTTCGGAGCGC
Product: peptidase S16, lon-like
Products: NA
Alternate protein names: ATP-Dependent Protease La; Peptidase S; ATP-Dependent Protease La Domain Protein; Endopeptidase; ATP-Dependent Protease; ATP-Dependent Proteinase; ATP-Dependent Protease La Domain-Containing Protein; Protease; ATP-Dependent Endopeptidase Lon
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MSSLSTTLIDLPLFPLHTVLFPGGLLPLKVFEARYLDMSRACLRDNAPFGVCLLKSGPEVAQDGAVSVPETIGCMARITE CDTGEFGMLYLQAVGTQRFELLSYRVEGNGLLVGIAEPLPDDIPLEGEQTLAQFGSCAEVLERIIAALKKTDPEKMPFGE PFRLDDPSWVSNRLAELLPLDLRARQKLMEFPDVGARIDAVHHVLDRHGWL
Sequences:
>Translated_211_residues MSSLSTTLIDLPLFPLHTVLFPGGLLPLKVFEARYLDMSRACLRDNAPFGVCLLKSGPEVAQDGAVSVPETIGCMARITE CDTGEFGMLYLQAVGTQRFELLSYRVEGNGLLVGIAEPLPDDIPLEGEQTLAQFGSCAEVLERIIAALKKTDPEKMPFGE PFRLDDPSWVSNRLAELLPLDLRARQKLMEFPDVGARIDAVHHVLDRHGWL >Mature_210_residues SSLSTTLIDLPLFPLHTVLFPGGLLPLKVFEARYLDMSRACLRDNAPFGVCLLKSGPEVAQDGAVSVPETIGCMARITEC DTGEFGMLYLQAVGTQRFELLSYRVEGNGLLVGIAEPLPDDIPLEGEQTLAQFGSCAEVLERIIAALKKTDPEKMPFGEP FRLDDPSWVSNRLAELLPLDLRARQKLMEFPDVGARIDAVHHVLDRHGWL
Specific function: Unknown
COG id: COG2802
COG function: function code R; Uncharacterized protein, similar to the N-terminal domain of Lon protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23260; Mature: 23129
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLSTTLIDLPLFPLHTVLFPGGLLPLKVFEARYLDMSRACLRDNAPFGVCLLKSGPEV CCCCHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCH AQDGAVSVPETIGCMARITECDTGEFGMLYLQAVGTQRFELLSYRVEGNGLLVGIAEPLP HCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHEEHEEEEECCCEEEEECCCCCC DDIPLEGEQTLAQFGSCAEVLERIIAALKKTDPEKMPFGEPFRLDDPSWVSNRLAELLPL CCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC DLRARQKLMEFPDVGARIDAVHHVLDRHGWL CHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SSLSTTLIDLPLFPLHTVLFPGGLLPLKVFEARYLDMSRACLRDNAPFGVCLLKSGPEV CCCHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCH AQDGAVSVPETIGCMARITECDTGEFGMLYLQAVGTQRFELLSYRVEGNGLLVGIAEPLP HCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHEEHEEEEECCCEEEEECCCCCC DDIPLEGEQTLAQFGSCAEVLERIIAALKKTDPEKMPFGEPFRLDDPSWVSNRLAELLPL CCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC DLRARQKLMEFPDVGARIDAVHHVLDRHGWL CHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA