Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is yhbJ [C]
Identifier: 78067594
GI number: 78067594
Start: 3268890
End: 3269825
Strand: Direct
Name: yhbJ [C]
Synonym: Bcep18194_A6125
Alternate gene names: 78067594
Gene position: 3268890-3269825 (Clockwise)
Preceding gene: 78067593
Following gene: 78067595
Centisome position: 88.49
GC content: 66.03
Gene sequence:
>936_bases ATGAAACGTCAGGATTCACTGCTTCCCATGCGCATCGTCCTCATCACCGGCATCTCCGGCTCAGGCAAGTCCGTCGCGCT GAACGCGCTCGAGGACGCAGGCTATTACTGTGTCGACAACCTGCCGCCGCACGTGCTCCCCGAACTCGCCCGCTACCTCG CCGGAGAGGGCCAGCACCGGCTCGCGGTCGCGATCGACGCGCGCTCGAGCGCGTCGCTCGACGAAATGCCCGGCCTGATC CGCGACCTGTCGCGCGAGCACGACGTGCGCGTGCTGTTCCTCAACGCGAGCACCCAGGCGCTGATCCAGCGCTTCTCCGA AACGCGCCGCCGCCACCCGCTGTCCGGTTCGCTGTCGCACGATGCGGACGTCGGCCTGCTGTCGTCGCTCGAGGAAGCGA TCGAGCGCGAACGCCACCTCGTCGCGCCGCTCGCCGAATTCGGCCACCAGATCGACACGAGCACGCTGCGCGCGAACGCG CTGCGTACGTGGGTCAAGCGCTTCATCGAGCAGAAGAACAACGACCTGATGGTGATGTTCGAATCGTTCGGCTTCAAGCG CGGCGTGCCGCTCGACGCCGACCTGATGTTCGACGTGCGCGCGCTGCCGAATCCGTACTACGACCACGAGTTGCGCCCGC TCACCGGGCTCGACCAGCCGGTTATTGCCTTTCTCGACGCACTGCCGATCGTCCACCAGATGATCGACGACATCCATGCG TTCCTGATGAAATGGCTGCCGCACTTCCGCGATGACAACCGCAGCTACCTGACCGTCGCCATCGGCTGCACGGGCGGGCA GCATCGGTCGGTGTTCATCGCGGAAACGCTCGCCGCGCGCCTTGCGCACGAGGCGAACGTGATCGTGCGGCATCGTGATG CGCCAGTGGATGTCGACGCGTCGTCGCGGCTCGTCTCCGAGGTCGACCGACCCTAG
Upstream 100 bases:
>100_bases ACGACTCGCGATGCAAGATCCCGACAGTCAGTTCCCCGGCAAACTGGTGTAACCCGCACGCGCCGGCCACGCAACGCCGA CGCGTCTGGCCGGTGCTATG
Downstream 100 bases:
>100_bases CGACACCCGCCCCTTCATCAGCGCGCCATGTCCTCCCTATCGACCACCCTGATCGACCTGCCGCTGTTTCCGCTGCACAC GGTGCTGTTTCCGGGGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MKRQDSLLPMRIVLITGISGSGKSVALNALEDAGYYCVDNLPPHVLPELARYLAGEGQHRLAVAIDARSSASLDEMPGLI RDLSREHDVRVLFLNASTQALIQRFSETRRRHPLSGSLSHDADVGLLSSLEEAIERERHLVAPLAEFGHQIDTSTLRANA LRTWVKRFIEQKNNDLMVMFESFGFKRGVPLDADLMFDVRALPNPYYDHELRPLTGLDQPVIAFLDALPIVHQMIDDIHA FLMKWLPHFRDDNRSYLTVAIGCTGGQHRSVFIAETLAARLAHEANVIVRHRDAPVDVDASSRLVSEVDRP
Sequences:
>Translated_311_residues MKRQDSLLPMRIVLITGISGSGKSVALNALEDAGYYCVDNLPPHVLPELARYLAGEGQHRLAVAIDARSSASLDEMPGLI RDLSREHDVRVLFLNASTQALIQRFSETRRRHPLSGSLSHDADVGLLSSLEEAIERERHLVAPLAEFGHQIDTSTLRANA LRTWVKRFIEQKNNDLMVMFESFGFKRGVPLDADLMFDVRALPNPYYDHELRPLTGLDQPVIAFLDALPIVHQMIDDIHA FLMKWLPHFRDDNRSYLTVAIGCTGGQHRSVFIAETLAARLAHEANVIVRHRDAPVDVDASSRLVSEVDRP >Mature_311_residues MKRQDSLLPMRIVLITGISGSGKSVALNALEDAGYYCVDNLPPHVLPELARYLAGEGQHRLAVAIDARSSASLDEMPGLI RDLSREHDVRVLFLNASTQALIQRFSETRRRHPLSGSLSHDADVGLLSSLEEAIERERHLVAPLAEFGHQIDTSTLRANA LRTWVKRFIEQKNNDLMVMFESFGFKRGVPLDADLMFDVRALPNPYYDHELRPLTGLDQPVIAFLDALPIVHQMIDDIHA FLMKWLPHFRDDNRSYLTVAIGCTGGQHRSVFIAETLAARLAHEANVIVRHRDAPVDVDASSRLVSEVDRP
Specific function: Displays ATPase and GTPase activities [H]
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family [H]
Homologues:
Organism=Escherichia coli, GI1789598, Length=287, Percent_Identity=47.7351916376307, Blast_Score=237, Evalue=8e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005337 [H]
Pfam domain/function: PF03668 ATP_bind_2 [H]
EC number: NA
Molecular weight: Translated: 34849; Mature: 34849
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRQDSLLPMRIVLITGISGSGKSVALNALEDAGYYCVDNLPPHVLPELARYLAGEGQHR CCCCCCCCCEEEEEEECCCCCCCEEEEEEHHCCCEEEECCCCHHHHHHHHHHHHCCCCCE LAVAIDARSSASLDEMPGLIRDLSREHDVRVLFLNASTQALIQRFSETRRRHPLSGSLSH EEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCC DADVGLLSSLEEAIERERHLVAPLAEFGHQIDTSTLRANALRTWVKRFIEQKNNDLMVMF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE ESFGFKRGVPLDADLMFDVRALPNPYYDHELRPLTGLDQPVIAFLDALPIVHQMIDDIHA ECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FLMKWLPHFRDDNRSYLTVAIGCTGGQHRSVFIAETLAARLAHEANVIVRHRDAPVDVDA HHHHHHHHHCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHHHCCEEEEECCCCCCCCH SSRLVSEVDRP HHHHHHHCCCC >Mature Secondary Structure MKRQDSLLPMRIVLITGISGSGKSVALNALEDAGYYCVDNLPPHVLPELARYLAGEGQHR CCCCCCCCCEEEEEEECCCCCCCEEEEEEHHCCCEEEECCCCHHHHHHHHHHHHCCCCCE LAVAIDARSSASLDEMPGLIRDLSREHDVRVLFLNASTQALIQRFSETRRRHPLSGSLSH EEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCC DADVGLLSSLEEAIERERHLVAPLAEFGHQIDTSTLRANALRTWVKRFIEQKNNDLMVMF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE ESFGFKRGVPLDADLMFDVRALPNPYYDHELRPLTGLDQPVIAFLDALPIVHQMIDDIHA ECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FLMKWLPHFRDDNRSYLTVAIGCTGGQHRSVFIAETLAARLAHEANVIVRHRDAPVDVDA HHHHHHHHHCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHHHCCEEEEECCCCCCCCH SSRLVSEVDRP HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA