Click here to switch to the map view.

The map label for this gene is dan [H]

Identifier: 78067537

GI number: 78067537

Start: 3209973

End: 3211454

Strand: Reverse

Name: dan [H]

Synonym: Bcep18194_A6068

Alternate gene names: 78067537

Gene position: 3211454-3209973 (Counterclockwise)

Preceding gene: 78067538

Following gene: 78067536

Centisome position: 86.93

GC content: 70.11

Gene sequence:

>1482_bases
ATGCATTCGCATCCCGAAGCCGCCGATACGCTGATCGTCGGCGCGCAGCTTTACGACGGTACCGGCGCGCCGCCCGTCAC
GCGCGACGTCGCGATCCGCAACGGCGTGATCGCGGCGATCGGCAACCTGTCGAACTGGCTTGCCGAGACCGTCGTCGATG
CGAACGGCCGCGCGCTCGCGCCGGGCTTCGTCGACGTGCACACGCACGACGACACGCACGTGATCCGCGCACCGGAGATG
ATCCCGAAGATCTCGCAGGGCGTGACGACCGTGATCGTCGGTAACTGCGGGATCAGCGCGTCGCCGGTGACGCTCGCGGG
CGATCCGCCCGACCCGATGAACCTGCTCGGCGAGCGCGGTGCGTTCCAGTACCCGACCTTCGCCGACTACGTCGCGGCCG
TGAACCATGCGCGTCCAGCCGTGAACGTCGCGGCGCTCGTCGGCCATACGGCGCTGCGCAACAACCAGATGGACCGCCTC
GACCGCGCGGCGACAGACGGCGAGATTGCCGGCATGCGCGCGCAGCTCGAGGAGGCGCTCGCGAACGGCGCGCTCGGCCT
GTCGTCGGGCCTCGCGTACGGCTCCGCGTTCGCGGCGCCGGCCGAAGAGGTGATGGCACTCGCCGAGCCGCTCGCGAACG
CGGACGCGCTGTACACGACGCACATGCGCACCGAGTTCGACGCGATCCTCGATGCGATGGAAGAGGCGTATCAGGTCGGC
CGTCATGCGCGCGTGCCGGTCGTGATCTCGCACCTGAAGTGCGCGGGCCCGTCGAACTGGGGGCGCAGCACCGAGGTGCT
TGCATCGCTCGAAGGTGCGCGCCGCTACCAGCCGGTCGGCTGCGACTGCTATCCGTACAGCCGCAGCTCGTCGACGCTCG
ACCTGAAGCAGGTGACAGGCGACATCGACATCACGATCACGTGGTCCGAGCCGCACCCGGAAGTGGCGGGCAAGCTGCTG
AAGGCGATCGCGGCCGACTGGGGCGTGACCGAGCAGGAGGCTGCGCAGCGCATCCGCCCGGCCGGCGCCGTTTACCACAA
CATGTCCGAGGACGACGTGCGCCGGATCCTGTCGCATCCCGCGACGATGGTCGGCTCCGACGGCCTGCCGAACGATCCGC
TGCCGCACCCGCGGCTGTGGGGCGCGTTCCCGCGCGTGCTCGGCCACTATGTGCGCGACACGAACCTGCTGCCGCTCGAG
GAGGCGATCCGCAAGATGACGTCGCTGTCCGCGCGCCGCTACGGGATCGCGAAGCGCGGCGAGGTGCATGTGGGCTACCA
CGCGGATCTCGTGCTGTTCGACCCGGCGAGCGTGATCGACGCCGCGACGTTCGAGAAGCCGCAGCAGCCCGCGCACGGGA
TCGATGCCGTGTGGGTGAACGGCGTGCTTACGTATGAAAACGGCCAGCCGACCGGCGAGCGCGCCGGCGGCTTCGTCGCG
CGCGGCGAGCGCGTGCCGGCGAGTGCCGACGCCGCGTTCTGA

Upstream 100 bases:

>100_bases
TGCGGCTCGGCGATGCGGGCCGAGAATCGCTGCGTCGCATCAAGCACGCGCTCGATGCGCATCGCGGCGGCGGAGACCGT
CAACCGGTAGGAGACTGACC

Downstream 100 bases:

>100_bases
ACGCGGTGGTTGTTCCGATCTGCCGCGCGTGCCGCTGTCGGTGCGCGCATCCGTAACCGAAACAAGGAGTGAAACGATGA
AGCGATATGGCGTAGGCGAA

Product: N-acyl-D-amino-acid deacylase

Products: NA

Alternate protein names: N-acyl-D-amino-acid deacylase [H]

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MHSHPEAADTLIVGAQLYDGTGAPPVTRDVAIRNGVIAAIGNLSNWLAETVVDANGRALAPGFVDVHTHDDTHVIRAPEM
IPKISQGVTTVIVGNCGISASPVTLAGDPPDPMNLLGERGAFQYPTFADYVAAVNHARPAVNVAALVGHTALRNNQMDRL
DRAATDGEIAGMRAQLEEALANGALGLSSGLAYGSAFAAPAEEVMALAEPLANADALYTTHMRTEFDAILDAMEEAYQVG
RHARVPVVISHLKCAGPSNWGRSTEVLASLEGARRYQPVGCDCYPYSRSSSTLDLKQVTGDIDITITWSEPHPEVAGKLL
KAIAADWGVTEQEAAQRIRPAGAVYHNMSEDDVRRILSHPATMVGSDGLPNDPLPHPRLWGAFPRVLGHYVRDTNLLPLE
EAIRKMTSLSARRYGIAKRGEVHVGYHADLVLFDPASVIDAATFEKPQQPAHGIDAVWVNGVLTYENGQPTGERAGGFVA
RGERVPASADAAF

Sequences:

>Translated_493_residues
MHSHPEAADTLIVGAQLYDGTGAPPVTRDVAIRNGVIAAIGNLSNWLAETVVDANGRALAPGFVDVHTHDDTHVIRAPEM
IPKISQGVTTVIVGNCGISASPVTLAGDPPDPMNLLGERGAFQYPTFADYVAAVNHARPAVNVAALVGHTALRNNQMDRL
DRAATDGEIAGMRAQLEEALANGALGLSSGLAYGSAFAAPAEEVMALAEPLANADALYTTHMRTEFDAILDAMEEAYQVG
RHARVPVVISHLKCAGPSNWGRSTEVLASLEGARRYQPVGCDCYPYSRSSSTLDLKQVTGDIDITITWSEPHPEVAGKLL
KAIAADWGVTEQEAAQRIRPAGAVYHNMSEDDVRRILSHPATMVGSDGLPNDPLPHPRLWGAFPRVLGHYVRDTNLLPLE
EAIRKMTSLSARRYGIAKRGEVHVGYHADLVLFDPASVIDAATFEKPQQPAHGIDAVWVNGVLTYENGQPTGERAGGFVA
RGERVPASADAAF
>Mature_493_residues
MHSHPEAADTLIVGAQLYDGTGAPPVTRDVAIRNGVIAAIGNLSNWLAETVVDANGRALAPGFVDVHTHDDTHVIRAPEM
IPKISQGVTTVIVGNCGISASPVTLAGDPPDPMNLLGERGAFQYPTFADYVAAVNHARPAVNVAALVGHTALRNNQMDRL
DRAATDGEIAGMRAQLEEALANGALGLSSGLAYGSAFAAPAEEVMALAEPLANADALYTTHMRTEFDAILDAMEEAYQVG
RHARVPVVISHLKCAGPSNWGRSTEVLASLEGARRYQPVGCDCYPYSRSSSTLDLKQVTGDIDITITWSEPHPEVAGKLL
KAIAADWGVTEQEAAQRIRPAGAVYHNMSEDDVRRILSHPATMVGSDGLPNDPLPHPRLWGAFPRVLGHYVRDTNLLPLE
EAIRKMTSLSARRYGIAKRGEVHVGYHADLVLFDPASVIDAATFEKPQQPAHGIDAVWVNGVLTYENGQPTGERAGGFVA
RGERVPASADAAF

Specific function: Has a wide specificity; hydrolyzes N-acyl derivative of neutral D-amino acids [H]

COG id: COG3653

COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR023100
- InterPro:   IPR012855
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3; PF07908 D-aminoacyl_C [H]

EC number: =3.5.1.81 [H]

Molecular weight: Translated: 52519; Mature: 52519

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSHPEAADTLIVGAQLYDGTGAPPVTRDVAIRNGVIAAIGNLSNWLAETVVDANGRALA
CCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHCCHHEEHHHHHHHHHHHHHCCCCCEEC
PGFVDVHTHDDTHVIRAPEMIPKISQGVTTVIVGNCGISASPVTLAGDPPDPMNLLGERG
CCEEEEECCCCCEEEECCHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCHHHHHCCCC
AFQYPTFADYVAAVNHARPAVNVAALVGHTALRNNQMDRLDRAATDGEIAGMRAQLEEAL
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHH
ANGALGLSSGLAYGSAFAAPAEEVMALAEPLANADALYTTHMRTEFDAILDAMEEAYQVG
HCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHC
RHARVPVVISHLKCAGPSNWGRSTEVLASLEGARRYQPVGCDCYPYSRSSSTLDLKQVTG
CCCCCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHCCC
DIDITITWSEPHPEVAGKLLKAIAADWGVTEQEAAQRIRPAGAVYHNMSEDDVRRILSHP
CEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHCC
ATMVGSDGLPNDPLPHPRLWGAFPRVLGHYVRDTNLLPLEEAIRKMTSLSARRYGIAKRG
HHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC
EVHVGYHADLVLFDPASVIDAATFEKPQQPAHGIDAVWVNGVLTYENGQPTGERAGGFVA
CEEEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCEEEECCEEEECCCCCCCHHCCCEEE
RGERVPASADAAF
CCCCCCCCCCCCC
>Mature Secondary Structure
MHSHPEAADTLIVGAQLYDGTGAPPVTRDVAIRNGVIAAIGNLSNWLAETVVDANGRALA
CCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHCCHHEEHHHHHHHHHHHHHCCCCCEEC
PGFVDVHTHDDTHVIRAPEMIPKISQGVTTVIVGNCGISASPVTLAGDPPDPMNLLGERG
CCEEEEECCCCCEEEECCHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCHHHHHCCCC
AFQYPTFADYVAAVNHARPAVNVAALVGHTALRNNQMDRLDRAATDGEIAGMRAQLEEAL
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHH
ANGALGLSSGLAYGSAFAAPAEEVMALAEPLANADALYTTHMRTEFDAILDAMEEAYQVG
HCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHC
RHARVPVVISHLKCAGPSNWGRSTEVLASLEGARRYQPVGCDCYPYSRSSSTLDLKQVTG
CCCCCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHCCC
DIDITITWSEPHPEVAGKLLKAIAADWGVTEQEAAQRIRPAGAVYHNMSEDDVRRILSHP
CEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHCC
ATMVGSDGLPNDPLPHPRLWGAFPRVLGHYVRDTNLLPLEEAIRKMTSLSARRYGIAKRG
HHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC
EVHVGYHADLVLFDPASVIDAATFEKPQQPAHGIDAVWVNGVLTYENGQPTGERAGGFVA
CEEEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCEEEECCEEEECCCCCCCHHCCCEEE
RGERVPASADAAF
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8541651 [H]