Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is 78067512
Identifier: 78067512
GI number: 78067512
Start: 3182272
End: 3182754
Strand: Reverse
Name: 78067512
Synonym: Bcep18194_A6043
Alternate gene names: NA
Gene position: 3182754-3182272 (Counterclockwise)
Preceding gene: 78067514
Following gene: 78067510
Centisome position: 86.16
GC content: 63.35
Gene sequence:
>483_bases ATGGGACTCAGCGACGCTCCACTGCTATTCACCTTCGAACACGATTCATCGGAAAACTTCACGTACATCCCGATGATCGT GCGTTTCAATCTCGACCGTTTTGGTCTGCGGATTTCACTGGAGCAGTGGCAGTTGCTGCCGCTCGAGGACCGCAAGCTGC TCGCGCGCTTTCCGGCCGACGACGACACCGCGATCGAGCCCAACTTCGATCACGCGCTGTTCGAAATGCTGCGCACGCAC GCGGATCTGGAACCATCGTGGTTCCAGCCGGACGAGCAGCCGACCTGGCGCGCCACCGACATCGTGCCGGAGTCGCTCGT ACAGCAGAGCGCGCTGGCCGGGCTGATGGCGCCCGAGCTTGCGCAGTGGCAGCGGCTCGCGCCGTTCCAGCGCTACGTGC TGGTGAAGCTGTCGCGCAAGCCGAAGCTGAACCACGATTTCCTGCCCGCGATGCGGGAGTTCGGGCTGACGGCCACGCAC TGA
Upstream 100 bases:
>100_bases GCGAGGCCGGCGGCAATCGTATCCGCCGCCCGCGCGCAGAGGTTCTAAAATACCTCAGGCAAGCCGGCCGCGCCGGTATC CGCCACGTCAGGTAACGATC
Downstream 100 bases:
>100_bases GCTGGCCGAAGGCAGGGGGAAGCGCCGCCGTGCGGCGCTCGCCCGTCAGAGCGGTGGCAGTTGCCGCGGCTTGCGGTCGG TGCCGGTCGCGACGTAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MGLSDAPLLFTFEHDSSENFTYIPMIVRFNLDRFGLRISLEQWQLLPLEDRKLLARFPADDDTAIEPNFDHALFEMLRTH ADLEPSWFQPDEQPTWRATDIVPESLVQQSALAGLMAPELAQWQRLAPFQRYVLVKLSRKPKLNHDFLPAMREFGLTATH
Sequences:
>Translated_160_residues MGLSDAPLLFTFEHDSSENFTYIPMIVRFNLDRFGLRISLEQWQLLPLEDRKLLARFPADDDTAIEPNFDHALFEMLRTH ADLEPSWFQPDEQPTWRATDIVPESLVQQSALAGLMAPELAQWQRLAPFQRYVLVKLSRKPKLNHDFLPAMREFGLTATH >Mature_159_residues GLSDAPLLFTFEHDSSENFTYIPMIVRFNLDRFGLRISLEQWQLLPLEDRKLLARFPADDDTAIEPNFDHALFEMLRTHA DLEPSWFQPDEQPTWRATDIVPESLVQQSALAGLMAPELAQWQRLAPFQRYVLVKLSRKPKLNHDFLPAMREFGLTATH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18607; Mature: 18476
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSDAPLLFTFEHDSSENFTYIPMIVRFNLDRFGLRISLEQWQLLPLEDRKLLARFPAD CCCCCCCEEEEEECCCCCCEEEEEEEEEECCCHHCEEEEECCEEECCCCCCHHHEECCCC DDTAIEPNFDHALFEMLRTHADLEPSWFQPDEQPTWRATDIVPESLVQQSALAGLMAPEL CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCHHH AQWQRLAPFQRYVLVKLSRKPKLNHDFLPAMREFGLTATH HHHHHCCHHHHEEEEEECCCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure GLSDAPLLFTFEHDSSENFTYIPMIVRFNLDRFGLRISLEQWQLLPLEDRKLLARFPAD CCCCCCEEEEEECCCCCCEEEEEEEEEECCCHHCEEEEECCEEECCCCCCHHHEECCCC DDTAIEPNFDHALFEMLRTHADLEPSWFQPDEQPTWRATDIVPESLVQQSALAGLMAPEL CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCHHH AQWQRLAPFQRYVLVKLSRKPKLNHDFLPAMREFGLTATH HHHHHCCHHHHEEEEEECCCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA