| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is 78067163
Identifier: 78067163
GI number: 78067163
Start: 2801577
End: 2802848
Strand: Direct
Name: 78067163
Synonym: Bcep18194_A5694
Alternate gene names: NA
Gene position: 2801577-2802848 (Clockwise)
Preceding gene: 78067162
Following gene: 78067165
Centisome position: 75.84
GC content: 67.61
Gene sequence:
>1272_bases GTGTCGGCGGGCCGCCGGCATGGCCACACGCGAGAGATCGGGCCCCGCGCTCACACCACCAACATGACCACCGTAGAAAT CGAAGCGACCGCTGATGTCGAACAGGCGCAGGCGTCCCTGTGGGACCTGTTCAAGGTCGTCGCCAGCATTTCGGCGGTGT CGTGGGGCGGGCTGTCGATGATGGCGCAGCTCGAGCGCCACTACGTGGAACGGCTGCGGCGCATCGAGCCCAACGTCTTC GGCGACCTCGTCGCGCTGGCCTGGCTGGTGCCGGGCCCCGTCGGCTGCAACGTGGCGGTGCAGGTCGGCCAGATCCTGCA CGGCCGCGTCGGCGCGTGGATCGCCGGCATCGCGAGCGTGCTGCCGTTCTCCATCCTGATGACGCTGTTCGCGATCTTCT ATCGCACGCCGCTCGTGCGCTCGCTGGCCGCGCCGATGCTGATCAATCATTTCGGGATGGTGCTCGCCGCGCTGATCGGC GTCACGTGGGTCAAGCAGTTGCGCTCGCTCGCGCAAACGCGGCGCGAGCAGTTGATCGCCGCGTTGTCGACGATTCTGCT CGGTTTTGCGCATAATCCGGCCGCCTTCGTCGGGATTCTGTTTGCGGCATTCGCGGCAGGCTGGCTGACGGGACCGCCGC AACGCGACGCGGTCGATTTCACGCTGTCGACCCGCGACCGCAACCTGCTCGTGCTGCTCGGCATATTCGTCACGCTGTTC GCGGTGCCGCTGCCCGGCGATTACCAGGCGACGCTGCTGTGGCCACGCCTCGCCGGCGCCGGCATGACGCTGTTCGGCGG CGGCTTTTCCGCGCTGCCCGTGCTCAAGACGCTGTTCGTCACGCCCGCAACGGGCATCTCCGATCACGACTTCACGCTTG CGTTTGCGCTGTCACCGGTCGCGCCGGGACCGCTGCTGAACGTCGTACCGTTTCTCGGCTACCTGACCGACGGCTGGGTC GGCGCGCTGCTCGCGACGGCCGCGCTGTTCATTCCGTCGGGGTGCCTCGTCGTGTTTGCGCAGAACCATCTGTCCCGGCT CAAGCGCCATTCGCGCTTCGAGTACGGGATGCGCCTGCTGCGTGCCGCGACGACGGGTTTTCTCGTCGTCGCCGTCGTGA GGATCCTGTACCGCGAACCAGCCGACCCCGTTTACTGGCTGACGGGCGCCTTCGCGACGCTGTGCTTTGCGCGCTTCAAG GTGCCCGTCTATGCCGTGTACGGCACGGTCGCGGTTGCGTGCGGCGTGTGGCTACTGGCCGCCGCGCGCTGA
Upstream 100 bases:
>100_bases CGTCATTGTTTCGTTTTCCGATCCGATTGTTTAGTTCATGAACTAGCGTTTTCGCGCATGGCAGTGTCACGGTGCGCGGC GGACAATCGGGAGGGCCAAC
Downstream 100 bases:
>100_bases CGGGCGACCGCCGCCGCCCTGCCGGGTTCTACCGGCATTCGTCCCGCTCGCCCGCCTGACCCGTCCTCAACCTGCCTGCA CCGCGATCCGGCGTGCGATC
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MSAGRRHGHTREIGPRAHTTNMTTVEIEATADVEQAQASLWDLFKVVASISAVSWGGLSMMAQLERHYVERLRRIEPNVF GDLVALAWLVPGPVGCNVAVQVGQILHGRVGAWIAGIASVLPFSILMTLFAIFYRTPLVRSLAAPMLINHFGMVLAALIG VTWVKQLRSLAQTRREQLIAALSTILLGFAHNPAAFVGILFAAFAAGWLTGPPQRDAVDFTLSTRDRNLLVLLGIFVTLF AVPLPGDYQATLLWPRLAGAGMTLFGGGFSALPVLKTLFVTPATGISDHDFTLAFALSPVAPGPLLNVVPFLGYLTDGWV GALLATAALFIPSGCLVVFAQNHLSRLKRHSRFEYGMRLLRAATTGFLVVAVVRILYREPADPVYWLTGAFATLCFARFK VPVYAVYGTVAVACGVWLLAAAR
Sequences:
>Translated_423_residues MSAGRRHGHTREIGPRAHTTNMTTVEIEATADVEQAQASLWDLFKVVASISAVSWGGLSMMAQLERHYVERLRRIEPNVF GDLVALAWLVPGPVGCNVAVQVGQILHGRVGAWIAGIASVLPFSILMTLFAIFYRTPLVRSLAAPMLINHFGMVLAALIG VTWVKQLRSLAQTRREQLIAALSTILLGFAHNPAAFVGILFAAFAAGWLTGPPQRDAVDFTLSTRDRNLLVLLGIFVTLF AVPLPGDYQATLLWPRLAGAGMTLFGGGFSALPVLKTLFVTPATGISDHDFTLAFALSPVAPGPLLNVVPFLGYLTDGWV GALLATAALFIPSGCLVVFAQNHLSRLKRHSRFEYGMRLLRAATTGFLVVAVVRILYREPADPVYWLTGAFATLCFARFK VPVYAVYGTVAVACGVWLLAAAR >Mature_422_residues SAGRRHGHTREIGPRAHTTNMTTVEIEATADVEQAQASLWDLFKVVASISAVSWGGLSMMAQLERHYVERLRRIEPNVFG DLVALAWLVPGPVGCNVAVQVGQILHGRVGAWIAGIASVLPFSILMTLFAIFYRTPLVRSLAAPMLINHFGMVLAALIGV TWVKQLRSLAQTRREQLIAALSTILLGFAHNPAAFVGILFAAFAAGWLTGPPQRDAVDFTLSTRDRNLLVLLGIFVTLFA VPLPGDYQATLLWPRLAGAGMTLFGGGFSALPVLKTLFVTPATGISDHDFTLAFALSPVAPGPLLNVVPFLGYLTDGWVG ALLATAALFIPSGCLVVFAQNHLSRLKRHSRFEYGMRLLRAATTGFLVVAVVRILYREPADPVYWLTGAFATLCFARFKV PVYAVYGTVAVACGVWLLAAAR
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 45662; Mature: 45531
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGRRHGHTREIGPRAHTTNMTTVEIEATADVEQAQASLWDLFKVVASISAVSWGGLSM CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH MAQLERHYVERLRRIEPNVFGDLVALAWLVPGPVGCNVAVQVGQILHGRVGAWIAGIASV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LPFSILMTLFAIFYRTPLVRSLAAPMLINHFGMVLAALIGVTWVKQLRSLAQTRREQLIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSTILLGFAHNPAAFVGILFAAFAAGWLTGPPQRDAVDFTLSTRDRNLLVLLGIFVTLF HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH AVPLPGDYQATLLWPRLAGAGMTLFGGGFSALPVLKTLFVTPATGISDHDFTLAFALSPV HCCCCCCCEEEEEEHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC APGPLLNVVPFLGYLTDGWVGALLATAALFIPSGCLVVFAQNHLSRLKRHSRFEYGMRLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHH RAATTGFLVVAVVRILYREPADPVYWLTGAFATLCFARFKVPVYAVYGTVAVACGVWLLA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AAR CCC >Mature Secondary Structure SAGRRHGHTREIGPRAHTTNMTTVEIEATADVEQAQASLWDLFKVVASISAVSWGGLSM CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH MAQLERHYVERLRRIEPNVFGDLVALAWLVPGPVGCNVAVQVGQILHGRVGAWIAGIASV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LPFSILMTLFAIFYRTPLVRSLAAPMLINHFGMVLAALIGVTWVKQLRSLAQTRREQLIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSTILLGFAHNPAAFVGILFAAFAAGWLTGPPQRDAVDFTLSTRDRNLLVLLGIFVTLF HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH AVPLPGDYQATLLWPRLAGAGMTLFGGGFSALPVLKTLFVTPATGISDHDFTLAFALSPV HCCCCCCCEEEEEEHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC APGPLLNVVPFLGYLTDGWVGALLATAALFIPSGCLVVFAQNHLSRLKRHSRFEYGMRLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHH RAATTGFLVVAVVRILYREPADPVYWLTGAFATLCFARFKVPVYAVYGTVAVACGVWLLA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AAR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]