| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is tal [H]
Identifier: 78067146
GI number: 78067146
Start: 2783782
End: 2784735
Strand: Direct
Name: tal [H]
Synonym: Bcep18194_A5677
Alternate gene names: 78067146
Gene position: 2783782-2784735 (Clockwise)
Preceding gene: 78067145
Following gene: 78067147
Centisome position: 75.36
GC content: 63.63
Gene sequence:
>954_bases ATGACTACCGCACTCGACCAGCTGAAGCAGTACACGACCGTCGTCGCCGACACGGGCGATTTCCAGCAGCTTGCGCAATA CCAGCCGCAGGACGCGACCACGAACCCGTCGCTGATCCTGAAGGCCGTCCAGAAGGACGCGTACAAGCCGATCCTCGAGA AAACCGTCCGCGATCATCGCAACGAAAGCACCGATTTCATCATCGACCGCCTGCTGATCGCATTCGGCACCGAGATCCTG AAGCTGATCCCGGGCCGCGTGTCGACCGAGGTCGACGCGCGCCTGTCGTTCGACACGCCGCGCTCGATCGACAAGGGCCG CGAGCTCATCAAGCTGTACGAAGCAGCCGGTATCGGCCGCGAGCGCATCCTGATCAAGCTCGCATCGACGTGGGAAGGCA TCCGCGCGGCCGAAGTGCTGCAGAAGGAAGGGATCAAGTGCAACATGACCCTGCTTTTCTCGCTCGTGCAGGCCGCCGCA TGCGCGGAAGCCGGCGCGCAGCTGATCTCGCCGTTCGTCGGCCGCATCTACGACTGGTACAAGAAGCAGGCCGGCGCCGA GTGGAATGAAGAGAAGGACGGTGGCGCGAACGATCCGGGCGTGCAGTCGGTGCGCCGCATCTACACGTACTACAAGACGT TCGGCTACAACACCGAAGTGATGGGCGCGAGCTTCCGCACGACCAGCCAGATCACCGAACTCGCCGGCTGCGACCTGCTG ACGATCAGTCCCGATTTGCTGCAGAAGCTGCAGGACAGCAACGACACCGTCACGCGCAAGCTGTCGCCGGACGCGCTGCA GGACAAGCCCGCCGCGCGCGTCGCGATCGACGAGGCCGCGTTCCGCTTCCAGCTGAACGACGACGCGATGGCGACCGAAA AGCTCGCCGAAGGCATCCGCGTATTCGCCGCCGATGCGGTGAAGCTCGAGAAGCTGATCGACTCGCTGCGCTAA
Upstream 100 bases:
>100_bases AATAGCGGATCGGAGGCGGTGCCCGGCGCCGCCTCGCTTCGCCGCCGCGTTCGCGCGGCCCGTGAGAACCCGGCGCCTTG CGCCCTTCTTCCGAATCGCC
Downstream 100 bases:
>100_bases GCCGCGACACGCGTCAGCGGCTGTCAGCAACACTGGCAACAGCCGTCAGCACGCACGCCGCACACGGCCGCGAACGTCAT GTTCGCGGCCGTTTTTATTT
Product: transaldolase B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTTALDQLKQYTTVVADTGDFQQLAQYQPQDATTNPSLILKAVQKDAYKPILEKTVRDHRNESTDFIIDRLLIAFGTEIL KLIPGRVSTEVDARLSFDTPRSIDKGRELIKLYEAAGIGRERILIKLASTWEGIRAAEVLQKEGIKCNMTLLFSLVQAAA CAEAGAQLISPFVGRIYDWYKKQAGAEWNEEKDGGANDPGVQSVRRIYTYYKTFGYNTEVMGASFRTTSQITELAGCDLL TISPDLLQKLQDSNDTVTRKLSPDALQDKPAARVAIDEAAFRFQLNDDAMATEKLAEGIRVFAADAVKLEKLIDSLR
Sequences:
>Translated_317_residues MTTALDQLKQYTTVVADTGDFQQLAQYQPQDATTNPSLILKAVQKDAYKPILEKTVRDHRNESTDFIIDRLLIAFGTEIL KLIPGRVSTEVDARLSFDTPRSIDKGRELIKLYEAAGIGRERILIKLASTWEGIRAAEVLQKEGIKCNMTLLFSLVQAAA CAEAGAQLISPFVGRIYDWYKKQAGAEWNEEKDGGANDPGVQSVRRIYTYYKTFGYNTEVMGASFRTTSQITELAGCDLL TISPDLLQKLQDSNDTVTRKLSPDALQDKPAARVAIDEAAFRFQLNDDAMATEKLAEGIRVFAADAVKLEKLIDSLR >Mature_316_residues TTALDQLKQYTTVVADTGDFQQLAQYQPQDATTNPSLILKAVQKDAYKPILEKTVRDHRNESTDFIIDRLLIAFGTEILK LIPGRVSTEVDARLSFDTPRSIDKGRELIKLYEAAGIGRERILIKLASTWEGIRAAEVLQKEGIKCNMTLLFSLVQAAAC AEAGAQLISPFVGRIYDWYKKQAGAEWNEEKDGGANDPGVQSVRRIYTYYKTFGYNTEVMGASFRTTSQITELAGCDLLT ISPDLLQKLQDSNDTVTRKLSPDALQDKPAARVAIDEAAFRFQLNDDAMATEKLAEGIRVFAADAVKLEKLIDSLR
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 1 subfamily [H]
Homologues:
Organism=Homo sapiens, GI5803187, Length=320, Percent_Identity=56.25, Blast_Score=344, Evalue=6e-95, Organism=Escherichia coli, GI1786189, Length=323, Percent_Identity=57.2755417956656, Blast_Score=340, Evalue=1e-94, Organism=Escherichia coli, GI1788807, Length=318, Percent_Identity=55.6603773584906, Blast_Score=336, Evalue=1e-93, Organism=Caenorhabditis elegans, GI25153750, Length=320, Percent_Identity=55.625, Blast_Score=338, Evalue=2e-93, Organism=Caenorhabditis elegans, GI25153752, Length=167, Percent_Identity=55.688622754491, Blast_Score=176, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17570473, Length=95, Percent_Identity=56.8421052631579, Blast_Score=99, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6321480, Length=323, Percent_Identity=50.7739938080495, Blast_Score=321, Evalue=1e-88, Organism=Saccharomyces cerevisiae, GI6323386, Length=321, Percent_Identity=55.7632398753894, Blast_Score=320, Evalue=1e-88, Organism=Drosophila melanogaster, GI45549185, Length=320, Percent_Identity=55, Blast_Score=352, Evalue=2e-97,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004730 - InterPro: IPR018225 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: =2.2.1.2 [H]
Molecular weight: Translated: 35236; Mature: 35105
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS01054 TRANSALDOLASE_1 ; PS00958 TRANSALDOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTALDQLKQYTTVVADTGDFQQLAQYQPQDATTNPSLILKAVQKDAYKPILEKTVRDHR CCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC NESTDFIIDRLLIAFGTEILKLIPGRVSTEVDARLSFDTPRSIDKGRELIKLYEAAGIGR CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCEECCCCCCCHHHHHHHHHHHHHHCCCH ERILIKLASTWEGIRAAEVLQKEGIKCNMTLLFSLVQAAACAEAGAQLISPFVGRIYDWY HHHHEEEHHHHCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKQAGAEWNEEKDGGANDPGVQSVRRIYTYYKTFGYNTEVMGASFRTTSQITELAGCDLL HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEE TISPDLLQKLQDSNDTVTRKLSPDALQDKPAARVAIDEAAFRFQLNDDAMATEKLAEGIR EECHHHHHHHHCCCCCEEECCCCHHHCCCCCHHHEEHHHHEEEEECCHHHHHHHHHHHHH VFAADAVKLEKLIDSLR HHHHHHHHHHHHHHHCC >Mature Secondary Structure TTALDQLKQYTTVVADTGDFQQLAQYQPQDATTNPSLILKAVQKDAYKPILEKTVRDHR CHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC NESTDFIIDRLLIAFGTEILKLIPGRVSTEVDARLSFDTPRSIDKGRELIKLYEAAGIGR CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCEECCCCCCCHHHHHHHHHHHHHHCCCH ERILIKLASTWEGIRAAEVLQKEGIKCNMTLLFSLVQAAACAEAGAQLISPFVGRIYDWY HHHHEEEHHHHCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKQAGAEWNEEKDGGANDPGVQSVRRIYTYYKTFGYNTEVMGASFRTTSQITELAGCDLL HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEE TISPDLLQKLQDSNDTVTRKLSPDALQDKPAARVAIDEAAFRFQLNDDAMATEKLAEGIR EECHHHHHHHHCCCCCEEECCCCHHHCCCCCHHHEEHHHHEEEEECCHHHHHHHHHHHHH VFAADAVKLEKLIDSLR HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA