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The map label for this gene is 78067135

Identifier: 78067135

GI number: 78067135

Start: 2773406

End: 2774881

Strand: Direct

Name: 78067135

Synonym: Bcep18194_A5666

Alternate gene names: NA

Gene position: 2773406-2774881 (Clockwise)

Preceding gene: 78067134

Following gene: 78067137

Centisome position: 75.08

GC content: 67.07

Gene sequence:

>1476_bases
ATGCTTTACCAACTGCACGAATTCCAGCGCGCCATGCTGAGCCCGCTGACGGCCTGGGCCCAGGCCGCGTCCAAATCGTT
CGCCAATCCGTCCAGCCCGTTCTCGCTGATGCCGGGCGCGACGCGGATGGCCGCCGCGTACGAACTGATGTACCGGCTCG
GCAAGGATTACGAGAAGCCCGAGTTCAACATTCATCAGATCGTCAAGGACGGTCACAACATCCCGATCGTCGAGCAGACG
ATCGTCGAGAAGCCGTTCTGCCGGCTGCTGCGTTTCAAGCGCTATTCGGACGACGCCGAAGCCGTCACCCAACTGAAAGA
TGAACCGGTCGTGCTGGTCTGCGCGCCGCTGTCGGGCCACCACTCGACGCTGCTGCGCGACACGGTGCGCACGCTACTGC
AGGATCACAAGGTCTACATCACCGACTGGATCGACGCGCGGATGGTGCCGATCGAGACCGGCGCGTTCCACCTGCACGAC
TACATCGCGTACATCCAGGAGTTCATCCGTCACATCGGCGCGCGCAACCTGCACGTGATCTCGGTGTGCCAGCCGACGGT
GCCGGTGCTCGCGGCGATCTCGCTGATGGCGAGCCGCGGCGAAGACACGCCGCTCACGATGACGATGATGGGCGGCCCGA
TCGATGCGCGCCGCAGCCCGACGTCGGTGAATTCGCTCGCCACGCAGCACTCGACCGCGTGGTTCGAGAACAACGTGATC
CACACGGTGCCCGCGAACTACCCGGGCGAAGGTCGCCAGGTGTATCCGGGCTTCCTGCAGCACACGGGCTTCGTCGCGAT
GAACCCGGAGCGGCACGCGCAATCGCACTGGGATTTCTACCAGAGCCTGCTGCGCGGCGACGAAGACGACGCCGAAGCAC
ACCGCCGCTTCTACGACGAATACAACGCGGTGCTCGACATGGCCGCCGAGTATTACCTCGAGACGATCCGCGTCGTGTTC
CAGGAATTCCGCCTGGCCGAAGGCACGTGGGATGTCGAAGGCGAGCGCGTGCGTCCGCAGGACATCCAGCACACCGCGCT
GATGACGATCGAGGGTGAACTCGACGACATCTCCGGCAGCGGCCAGACCCACGTCGCGCACGAGCTGTGCACGGGCATCC
CGCAGGACCAGCGTCGCAGCCTGACCGCCGAGAAGTGCGGTCACTACGGGATTTTCTCGGGCCGCCGCTGGCGCACGATC
ATCTATCCGCAACTGCGCGACTTCATCCGCGAGCACGCACCGGAGCCGAAGCACGGCGCGACGAAGGATGTCCCGGAAGC
ACCGGCGGCCACGACGCTCGCAGCCGTGCCGGCCGGCGACGCGCCGGCCGAAGCGACGCGCGCCGCCGCGGCGAAGCGCA
CGCGCGCAAAGGCGCCGGCGAAGGCCGCCGCCCCCGCCAAGGCCGCACCGGCCGCGAAACGCGCCGCTGCCGGCAGCCCG
CGCGCCAAGGCCGTACGCACGCGCAAGGCCGCCTGA

Upstream 100 bases:

>100_bases
GTCCGGCTGCAGTGCAACATGGCCGGTCGCTGACCCACACGGCACGCCGCGACGCCCCACGCCGCCCTTGCGCACCGTCC
CCCACGCGGGAGTAGTCTGC

Downstream 100 bases:

>100_bases
CGCACCGCGTTCCGACGAAAAAACGCCGCCGTTGCCTGCGCACGGCGGCGTTTTTACATCTGGCGGCCGCTTCGGCGCGG
TCGGCGCATCAACGCATCAG

Product: polyhydroxyalkanoate depolymerase

Products: NA

Alternate protein names: Intracellular PHB Depolymerase; Polyhydroxyalkanoate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase; PHB Depolymerase; PHB De-Polymerase Domain-Containing Protein; Intracellular Poly(3-Hydroxybutyrate) Depolymerase; Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Intracellular Polyhydroxyalkanoate Depolymerase; Polyhydroxyalkanoate Depolymerase Intracellular Subfamily; Poly(3-Hydroxyalkanoate) Depolymerase; Poly(3-Hydroxybutyrate) Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase Protein; Poly[D(-)-3-Hydroxyalkanoate] Depolymerase; Polyhydroxybutanoate Depolymerase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Intracellular PHB Depolymerase Protein; Poly-Beta-Hydroxybutyrate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase-Like Protein; PHB De-Polymerase Domain Protein; PHB De-Polymerase; Intracellular Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Poly[D(-)-3-Hydroxybutyrate](Phb) Depolymerase; Poly-Beta-Hydroxyalkanoate/Butyrate Depolymerase

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MLYQLHEFQRAMLSPLTAWAQAASKSFANPSSPFSLMPGATRMAAAYELMYRLGKDYEKPEFNIHQIVKDGHNIPIVEQT
IVEKPFCRLLRFKRYSDDAEAVTQLKDEPVVLVCAPLSGHHSTLLRDTVRTLLQDHKVYITDWIDARMVPIETGAFHLHD
YIAYIQEFIRHIGARNLHVISVCQPTVPVLAAISLMASRGEDTPLTMTMMGGPIDARRSPTSVNSLATQHSTAWFENNVI
HTVPANYPGEGRQVYPGFLQHTGFVAMNPERHAQSHWDFYQSLLRGDEDDAEAHRRFYDEYNAVLDMAAEYYLETIRVVF
QEFRLAEGTWDVEGERVRPQDIQHTALMTIEGELDDISGSGQTHVAHELCTGIPQDQRRSLTAEKCGHYGIFSGRRWRTI
IYPQLRDFIREHAPEPKHGATKDVPEAPAATTLAAVPAGDAPAEATRAAAAKRTRAKAPAKAAAPAKAAPAAKRAAAGSP
RAKAVRTRKAA

Sequences:

>Translated_491_residues
MLYQLHEFQRAMLSPLTAWAQAASKSFANPSSPFSLMPGATRMAAAYELMYRLGKDYEKPEFNIHQIVKDGHNIPIVEQT
IVEKPFCRLLRFKRYSDDAEAVTQLKDEPVVLVCAPLSGHHSTLLRDTVRTLLQDHKVYITDWIDARMVPIETGAFHLHD
YIAYIQEFIRHIGARNLHVISVCQPTVPVLAAISLMASRGEDTPLTMTMMGGPIDARRSPTSVNSLATQHSTAWFENNVI
HTVPANYPGEGRQVYPGFLQHTGFVAMNPERHAQSHWDFYQSLLRGDEDDAEAHRRFYDEYNAVLDMAAEYYLETIRVVF
QEFRLAEGTWDVEGERVRPQDIQHTALMTIEGELDDISGSGQTHVAHELCTGIPQDQRRSLTAEKCGHYGIFSGRRWRTI
IYPQLRDFIREHAPEPKHGATKDVPEAPAATTLAAVPAGDAPAEATRAAAAKRTRAKAPAKAAAPAKAAPAAKRAAAGSP
RAKAVRTRKAA
>Mature_491_residues
MLYQLHEFQRAMLSPLTAWAQAASKSFANPSSPFSLMPGATRMAAAYELMYRLGKDYEKPEFNIHQIVKDGHNIPIVEQT
IVEKPFCRLLRFKRYSDDAEAVTQLKDEPVVLVCAPLSGHHSTLLRDTVRTLLQDHKVYITDWIDARMVPIETGAFHLHD
YIAYIQEFIRHIGARNLHVISVCQPTVPVLAAISLMASRGEDTPLTMTMMGGPIDARRSPTSVNSLATQHSTAWFENNVI
HTVPANYPGEGRQVYPGFLQHTGFVAMNPERHAQSHWDFYQSLLRGDEDDAEAHRRFYDEYNAVLDMAAEYYLETIRVVF
QEFRLAEGTWDVEGERVRPQDIQHTALMTIEGELDDISGSGQTHVAHELCTGIPQDQRRSLTAEKCGHYGIFSGRRWRTI
IYPQLRDFIREHAPEPKHGATKDVPEAPAATTLAAVPAGDAPAEATRAAAAKRTRAKAPAKAAAPAKAAPAAKRAAAGSP
RAKAVRTRKAA

Specific function: Unknown

COG id: COG4553

COG function: function code I; Poly-beta-hydroxyalkanoate depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.1.-

Molecular weight: Translated: 54678; Mature: 54678

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYQLHEFQRAMLSPLTAWAQAASKSFANPSSPFSLMPGATRMAAAYELMYRLGKDYEKP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCC
EFNIHQIVKDGHNIPIVEQTIVEKPFCRLLRFKRYSDDAEAVTQLKDEPVVLVCAPLSGH
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCC
HSTLLRDTVRTLLQDHKVYITDWIDARMVPIETGAFHLHDYIAYIQEFIRHIGARNLHVI
HHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEE
SVCQPTVPVLAAISLMASRGEDTPLTMTMMGGPIDARRSPTSVNSLATQHSTAWFENNVI
EECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEE
HTVPANYPGEGRQVYPGFLQHTGFVAMNPERHAQSHWDFYQSLLRGDEDDAEAHRRFYDE
EECCCCCCCCCCEECCHHHHHCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
YNAVLDMAAEYYLETIRVVFQEFRLAEGTWDVEGERVRPQDIQHTALMTIEGELDDISGS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
GQTHVAHELCTGIPQDQRRSLTAEKCGHYGIFSGRRWRTIIYPQLRDFIREHAPEPKHGA
CCHHHHHHHHHCCCCHHHHCCCHHHCCCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCC
TKDVPEAPAATTLAAVPAGDAPAEATRAAAAKRTRAKAPAKAAAPAKAAPAAKRAAAGSP
CCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHCCCCC
RAKAVRTRKAA
HHHHHHHHCCC
>Mature Secondary Structure
MLYQLHEFQRAMLSPLTAWAQAASKSFANPSSPFSLMPGATRMAAAYELMYRLGKDYEKP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCC
EFNIHQIVKDGHNIPIVEQTIVEKPFCRLLRFKRYSDDAEAVTQLKDEPVVLVCAPLSGH
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCC
HSTLLRDTVRTLLQDHKVYITDWIDARMVPIETGAFHLHDYIAYIQEFIRHIGARNLHVI
HHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEE
SVCQPTVPVLAAISLMASRGEDTPLTMTMMGGPIDARRSPTSVNSLATQHSTAWFENNVI
EECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEE
HTVPANYPGEGRQVYPGFLQHTGFVAMNPERHAQSHWDFYQSLLRGDEDDAEAHRRFYDE
EECCCCCCCCCCEECCHHHHHCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
YNAVLDMAAEYYLETIRVVFQEFRLAEGTWDVEGERVRPQDIQHTALMTIEGELDDISGS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
GQTHVAHELCTGIPQDQRRSLTAEKCGHYGIFSGRRWRTIIYPQLRDFIREHAPEPKHGA
CCHHHHHHHHHCCCCHHHHCCCHHHCCCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCC
TKDVPEAPAATTLAAVPAGDAPAEATRAAAAKRTRAKAPAKAAAPAKAAPAAKRAAAGSP
CCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHCCCCC
RAKAVRTRKAA
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA