Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

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The map label for this gene is 78067134

Identifier: 78067134

GI number: 78067134

Start: 2771364

End: 2773193

Strand: Direct

Name: 78067134

Synonym: Bcep18194_A5665

Alternate gene names: NA

Gene position: 2771364-2773193 (Clockwise)

Preceding gene: 78067132

Following gene: 78067135

Centisome position: 75.02

GC content: 69.29

Gene sequence:

>1830_bases
ATGCCTGCCCTGATCGAAGACTACGCCCTCGTCGGCGACGGCCACACCGCCGCGCTGATCGCTAAAGACGGCTCCGTCGA
CTGGCTGTGCTGGCCCCGCTTCGATTCGGGCGCCTGCTTCGCGGCGCTACTCGGCACCCCCGAGCACGGCCGCTGGCTGC
TCGCGCCGGCCGCCGACGCCGCGATCACGCACACGACGCGCCGCTATCGCGGCGACACGCTGATTCTCGAAACCGACTAC
GAAAGCGCCGACGGCGCCGTCACCGTGGTCGACTTCATGCCGCCCGGCAACGGCTGGTCCGAGCTGGTGCGGATCGTCGT
CGGCCGCCACGGCACGATGAAGATGCGGATGGAGCTGGTGTTGCGCTTCGACTACGGCTTCTCGATCCCGTGGGTCACGC
AGCTGACCCGCGAGGACGGCATGAAGGCAATCGCGGGCCCCGACACCGTCGTGCTGCGCACGCCGGTGCCGCTCACCGGC
GAAAACCTTCATACGCTCGCGGAATTCACGGTGAGCGCGGACGAGCGCGTGCCGTTCTCGCTCAGCTATGCGGCATCGCA
CCTGCGACTGCCGCCCGCGCGCGATCCGCTGTCGATGCTCGCGCGCACCGAGAACTACTGGCTCGAATGGTCGGGCCGCT
GCCAGGTGCAGGGCCGCTACGCGGCCGCGGTACGCCGTTCGCTGATCACGCTGAAAGCGCTCGCGTACGAGCCGACCGGC
GGGATCGTCGCGGCGCCGACCACGTCGCTGCCCGAGAAGATCGGCGGCAACCGCAACTGGGACTACCGCTACTGCTGGCT
GCGCGACGCGACGATCACGCTGCTCGCGTTGATGCGCGGCGGCTACTACGACGAGGCGCGCGCGTGGCGCACGTGGCTGG
GCCGCGTGATGGCCGGCTCGCCCGAACAGATCCAGATCATGTACGGGATCGCCGGCGAGCGCCGGCTGCCGGAAATGGAG
CTCGACTGGCTGCCCGGCTACCAGGACTCGAAGCCGGTGCGCGTCGGCAACGGCGCCGCGAACCAGCTCCAGCTCGACGT
GTTCGGCGAGGTGATGGCCGCGCTGCACCTCGCACGGGTGGGCGGCCTGCAGGCCGACGACACGGTCTGGTCGGTGCAGT
GCGCGCTACTCGACCATCTCGAGAAGATCTGGCAGGAACCCGACGAAGGCATCTGGGAAACGCGCGGCGGCCGCCGCCAC
TTCACGTTTTCGAAGGTGATGGCGTGGGTCGCGTTCGACCGCGCGATCAAGTCGGCAGAGATGTTCCGGCTGCCGGGCAC
GCTCGACCGCTGGCGCGCGCTGCGCGACCAGATCCACGCCGACGTATGCGCCAACGCGTGGCATGAAAGCAAACGGGCGT
TTGCACAGAGCTACGGCAGCGACGAGCTCGACGCCAGCGTGCTGCTGATGCCGCTGCTCGGTTTCCTGCCGCCGGAAGAT
CCGCGCATCGTCGGCACGGTCGAGGCGATCGAGCGGGAATTGCTGCACGACGGGCTCGTGATGCGCTACCGCACGACCGA
CTACGACGACGGCCTGCCGCCCGGCGAAGGCACGTTTCTCGCATGCAGCTTCTGGCTGGTCGACAACTATGCGCTGCTGG
GCCGGATCGACGACGCGCACCGGCTGTTCAGCCGGCTGCTCGCGCTGTCGAACGACCTCGGGCTGCTCGCGGAGGAGTAC
GACCCGGTGGCCGGCCGGCTCGTCGGCAACTTCCCGCAGGCGTTCTCGCACGTTGCGCTCGTGCATACCGCGATGAACCT
GATGCACCACGAGGACGCGATGGCGCGCGCAGCCGGCCAGCCCGCGCCGGCCGTGGCAACGGGTCGCTGA

Upstream 100 bases:

>100_bases
TCCGCCGCCCGGCCGAGTATACGGGGCGCGGCGCCAGCGCGTGAAGCCTTGGCCGCCGCCGTCCGCATTGTGAACTCGAA
TACCCAAGGATCGCCTGCCC

Downstream 100 bases:

>100_bases
ACGGGGGCGCGAGCGGCTTGGTCAGAGAACGTCAAATCGCAAAACTTTGATGAAAAATCGGGGAAATGTTGCATTGCACC
ACCCATCGTTGTCCGATATG

Product: glycoside hydrolase 15-like protein

Products: NA

Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Trehalose-Phosphatase; Glucoamylase; Glycoside Hydrolase Family Protein; Glucoamylase-Like Glycosyl Hydrolase; Trehalose Phosphatase; Trehalose-Phosphatase/Glycoside Hydrolase; Glycosyl Hydrolase Glucoamylase; Trehalose-Phosphatase/ Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Glucoamylase Or Related Glycosyl Hydrolase; HAD Family Hydrolase; Six-Hairpin Glycosidase-Like Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Trehalose 6-Phosphatase; Glycosyl Hydrolase Protein; Trehalose-6-Phosphate Phophatase

Number of amino acids: Translated: 609; Mature: 608

Protein sequence:

>609_residues
MPALIEDYALVGDGHTAALIAKDGSVDWLCWPRFDSGACFAALLGTPEHGRWLLAPAADAAITHTTRRYRGDTLILETDY
ESADGAVTVVDFMPPGNGWSELVRIVVGRHGTMKMRMELVLRFDYGFSIPWVTQLTREDGMKAIAGPDTVVLRTPVPLTG
ENLHTLAEFTVSADERVPFSLSYAASHLRLPPARDPLSMLARTENYWLEWSGRCQVQGRYAAAVRRSLITLKALAYEPTG
GIVAAPTTSLPEKIGGNRNWDYRYCWLRDATITLLALMRGGYYDEARAWRTWLGRVMAGSPEQIQIMYGIAGERRLPEME
LDWLPGYQDSKPVRVGNGAANQLQLDVFGEVMAALHLARVGGLQADDTVWSVQCALLDHLEKIWQEPDEGIWETRGGRRH
FTFSKVMAWVAFDRAIKSAEMFRLPGTLDRWRALRDQIHADVCANAWHESKRAFAQSYGSDELDASVLLMPLLGFLPPED
PRIVGTVEAIERELLHDGLVMRYRTTDYDDGLPPGEGTFLACSFWLVDNYALLGRIDDAHRLFSRLLALSNDLGLLAEEY
DPVAGRLVGNFPQAFSHVALVHTAMNLMHHEDAMARAAGQPAPAVATGR

Sequences:

>Translated_609_residues
MPALIEDYALVGDGHTAALIAKDGSVDWLCWPRFDSGACFAALLGTPEHGRWLLAPAADAAITHTTRRYRGDTLILETDY
ESADGAVTVVDFMPPGNGWSELVRIVVGRHGTMKMRMELVLRFDYGFSIPWVTQLTREDGMKAIAGPDTVVLRTPVPLTG
ENLHTLAEFTVSADERVPFSLSYAASHLRLPPARDPLSMLARTENYWLEWSGRCQVQGRYAAAVRRSLITLKALAYEPTG
GIVAAPTTSLPEKIGGNRNWDYRYCWLRDATITLLALMRGGYYDEARAWRTWLGRVMAGSPEQIQIMYGIAGERRLPEME
LDWLPGYQDSKPVRVGNGAANQLQLDVFGEVMAALHLARVGGLQADDTVWSVQCALLDHLEKIWQEPDEGIWETRGGRRH
FTFSKVMAWVAFDRAIKSAEMFRLPGTLDRWRALRDQIHADVCANAWHESKRAFAQSYGSDELDASVLLMPLLGFLPPED
PRIVGTVEAIERELLHDGLVMRYRTTDYDDGLPPGEGTFLACSFWLVDNYALLGRIDDAHRLFSRLLALSNDLGLLAEEY
DPVAGRLVGNFPQAFSHVALVHTAMNLMHHEDAMARAAGQPAPAVATGR
>Mature_608_residues
PALIEDYALVGDGHTAALIAKDGSVDWLCWPRFDSGACFAALLGTPEHGRWLLAPAADAAITHTTRRYRGDTLILETDYE
SADGAVTVVDFMPPGNGWSELVRIVVGRHGTMKMRMELVLRFDYGFSIPWVTQLTREDGMKAIAGPDTVVLRTPVPLTGE
NLHTLAEFTVSADERVPFSLSYAASHLRLPPARDPLSMLARTENYWLEWSGRCQVQGRYAAAVRRSLITLKALAYEPTGG
IVAAPTTSLPEKIGGNRNWDYRYCWLRDATITLLALMRGGYYDEARAWRTWLGRVMAGSPEQIQIMYGIAGERRLPEMEL
DWLPGYQDSKPVRVGNGAANQLQLDVFGEVMAALHLARVGGLQADDTVWSVQCALLDHLEKIWQEPDEGIWETRGGRRHF
TFSKVMAWVAFDRAIKSAEMFRLPGTLDRWRALRDQIHADVCANAWHESKRAFAQSYGSDELDASVLLMPLLGFLPPEDP
RIVGTVEAIERELLHDGLVMRYRTTDYDDGLPPGEGTFLACSFWLVDNYALLGRIDDAHRLFSRLLALSNDLGLLAEEYD
PVAGRLVGNFPQAFSHVALVHTAMNLMHHEDAMARAAGQPAPAVATGR

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67718; Mature: 67587

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALIEDYALVGDGHTAALIAKDGSVDWLCWPRFDSGACFAALLGTPEHGRWLLAPAADA
CCCCCCCEEEECCCCEEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCH
AITHTTRRYRGDTLILETDYESADGAVTVVDFMPPGNGWSELVRIVVGRHGTMKMRMELV
HHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEE
LRFDYGFSIPWVTQLTREDGMKAIAGPDTVVLRTPVPLTGENLHTLAEFTVSADERVPFS
EEECCCCCCCHHHHHHHHCCCEEECCCCEEEEECCCCCCCCCHHHHHHHEECCCCCCCEE
LSYAASHLRLPPARDPLSMLARTENYWLEWSGRCQVQGRYAAAVRRSLITLKALAYEPTG
EHHHHHHCCCCCCCCHHHHHHCCCCEEEEECCEEEECCHHHHHHHHHHHHHHHEEECCCC
GIVAAPTTSLPEKIGGNRNWDYRYCWLRDATITLLALMRGGYYDEARAWRTWLGRVMAGS
CEEECCCCCCHHHHCCCCCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PEQIQIMYGIAGERRLPEMELDWLPGYQDSKPVRVGNGAANQLQLDVFGEVMAALHLARV
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHH
GGLQADDTVWSVQCALLDHLEKIWQEPDEGIWETRGGRRHFTFSKVMAWVAFDRAIKSAE
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHCHH
MFRLPGTLDRWRALRDQIHADVCANAWHESKRAFAQSYGSDELDASVLLMPLLGFLPPED
HEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
PRIVGTVEAIERELLHDGLVMRYRTTDYDDGLPPGEGTFLACSFWLVDNYALLGRIDDAH
CEEEEHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEEEEEHHCEEEEECCCHHH
RLFSRLLALSNDLGLLAEEYDPVAGRLVGNFPQAFSHVALVHTAMNLMHHEDAMARAAGQ
HHHHHHHHHCCCCCHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAPAVATGR
CCCCCCCCC
>Mature Secondary Structure 
PALIEDYALVGDGHTAALIAKDGSVDWLCWPRFDSGACFAALLGTPEHGRWLLAPAADA
CCCCCCEEEECCCCEEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCH
AITHTTRRYRGDTLILETDYESADGAVTVVDFMPPGNGWSELVRIVVGRHGTMKMRMELV
HHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEE
LRFDYGFSIPWVTQLTREDGMKAIAGPDTVVLRTPVPLTGENLHTLAEFTVSADERVPFS
EEECCCCCCCHHHHHHHHCCCEEECCCCEEEEECCCCCCCCCHHHHHHHEECCCCCCCEE
LSYAASHLRLPPARDPLSMLARTENYWLEWSGRCQVQGRYAAAVRRSLITLKALAYEPTG
EHHHHHHCCCCCCCCHHHHHHCCCCEEEEECCEEEECCHHHHHHHHHHHHHHHEEECCCC
GIVAAPTTSLPEKIGGNRNWDYRYCWLRDATITLLALMRGGYYDEARAWRTWLGRVMAGS
CEEECCCCCCHHHHCCCCCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PEQIQIMYGIAGERRLPEMELDWLPGYQDSKPVRVGNGAANQLQLDVFGEVMAALHLARV
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHH
GGLQADDTVWSVQCALLDHLEKIWQEPDEGIWETRGGRRHFTFSKVMAWVAFDRAIKSAE
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHCHH
MFRLPGTLDRWRALRDQIHADVCANAWHESKRAFAQSYGSDELDASVLLMPLLGFLPPED
HEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
PRIVGTVEAIERELLHDGLVMRYRTTDYDDGLPPGEGTFLACSFWLVDNYALLGRIDDAH
CEEEEHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEEEEEHHCEEEEECCCHHH
RLFSRLLALSNDLGLLAEEYDPVAGRLVGNFPQAFSHVALVHTAMNLMHHEDAMARAAGQ
HHHHHHHHHCCCCCHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAPAVATGR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA