| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066959
Identifier: 78066959
GI number: 78066959
Start: 2577443
End: 2577895
Strand: Direct
Name: 78066959
Synonym: Bcep18194_A5490
Alternate gene names: NA
Gene position: 2577443-2577895 (Clockwise)
Preceding gene: 78066958
Following gene: 78066964
Centisome position: 69.77
GC content: 66.45
Gene sequence:
>453_bases ATGCCCGATCTGCAAACACTGTCCGACCATCACGACATCCGCGAGCTGATCGTCGCGTATTCGACTGCGATCGACACGCG CGACTTCGACGCGCTCGACGCGGTGTTCACACCGGATGCCGCAATCGACTATCGCGCGATGGGCGGCATCGCCGGCCGCT ATCCGGAGGTAAAGGCGTGGCTGCGCACCGTGCTGCCGCAGTTTCCGCAGTACCAGCACATGGTCGGCAACCTGTCGATC CGGCTCGAAGGCGATACCGCGCGCGGCCGCACGATCTGCTTCAATCCGATGGAGGTCGCGCTGCCGGACGGCAGCACGCA GGTGATGTTTCTCGGGCTGTGGTACGTCGACCGGTTCATGCGCACCGCGCAGGGCTGGCGCATCGCCGAGCGCGTCGAAG AGCGCTGCTACGGCCACAACGTGCCGGCCGTGCTCGCGGGCGCGACCGGTTGA
Upstream 100 bases:
>100_bases GTGAAACAGGGCTTCGACCAGTGCGCGCGCGACGTGAAGCAGCGTGCCGAAGCGCTCCACGCGGCACGCCGGCGCAACAA CGCGTGACCGGGAGCCGCCG
Downstream 100 bases:
>100_bases TCCATGCGCGACGCGCGCGCCGTGCGAAAGCTGCACGGCGCGCGCATCCTGGACCATCGCGTCGATCAATCGAGCCGGAA CGCGGCCTCGAATCGCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MPDLQTLSDHHDIRELIVAYSTAIDTRDFDALDAVFTPDAAIDYRAMGGIAGRYPEVKAWLRTVLPQFPQYQHMVGNLSI RLEGDTARGRTICFNPMEVALPDGSTQVMFLGLWYVDRFMRTAQGWRIAERVEERCYGHNVPAVLAGATG
Sequences:
>Translated_150_residues MPDLQTLSDHHDIRELIVAYSTAIDTRDFDALDAVFTPDAAIDYRAMGGIAGRYPEVKAWLRTVLPQFPQYQHMVGNLSI RLEGDTARGRTICFNPMEVALPDGSTQVMFLGLWYVDRFMRTAQGWRIAERVEERCYGHNVPAVLAGATG >Mature_149_residues PDLQTLSDHHDIRELIVAYSTAIDTRDFDALDAVFTPDAAIDYRAMGGIAGRYPEVKAWLRTVLPQFPQYQHMVGNLSIR LEGDTARGRTICFNPMEVALPDGSTQVMFLGLWYVDRFMRTAQGWRIAERVEERCYGHNVPAVLAGATG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16847; Mature: 16716
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDLQTLSDHHDIRELIVAYSTAIDTRDFDALDAVFTPDAAIDYRAMGGIAGRYPEVKAW CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCHHHHCCCCCCCHHHHHH LRTVLPQFPQYQHMVGNLSIRLEGDTARGRTICFNPMEVALPDGSTQVMFLGLWYVDRFM HHHHHCCCCCHHHHHCCEEEEEECCCCCCCEEEECCCEEECCCCCCEEEEHHHHHHHHHH RTAQGWRIAERVEERCYGHNVPAVLAGATG HHHCCCHHHHHHHHHHCCCCCCEEEECCCC >Mature Secondary Structure PDLQTLSDHHDIRELIVAYSTAIDTRDFDALDAVFTPDAAIDYRAMGGIAGRYPEVKAW CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCHHHHCCCCCCCHHHHHH LRTVLPQFPQYQHMVGNLSIRLEGDTARGRTICFNPMEVALPDGSTQVMFLGLWYVDRFM HHHHHCCCCCHHHHHCCEEEEEECCCCCCCEEEECCCEEECCCCCCEEEEHHHHHHHHHH RTAQGWRIAERVEERCYGHNVPAVLAGATG HHHCCCHHHHHHHHHHCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]