| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is 78066958
Identifier: 78066958
GI number: 78066958
Start: 2576950
End: 2577429
Strand: Direct
Name: 78066958
Synonym: Bcep18194_A5489
Alternate gene names: NA
Gene position: 2576950-2577429 (Clockwise)
Preceding gene: 78066956
Following gene: 78066959
Centisome position: 69.76
GC content: 64.38
Gene sequence:
>480_bases ATGACCAAACCCTCGAATCTCGTCACCTCGATCACCGTCGACATCGACGCACCGGCCTCCGTCGTCTGGGAAGTGCTGAC CGACTTCCCGCGCTACGGCGAATGGAACACGTTCTGCGTCGGCTTCGAAACGACCGGCAAACTCGGTGATTTCGTGCACA TGCAGGTGCGCATCCCGGGCACGGAGACCGTGATTCCCGTCAACGAGATCCTCGTCGCGTACGAACCCGAACGCCTGCTG TCGTGGGAGCAGCGCCCGACCGACGACAACAAGGACGCCGCGCGCCGCGACCAGTACATCGATGCGATCGGCGCGGAGCG CTGCCGCTATTTCACGACCGACCAGTTCCTCGGCCTCAACGCAGACACGATCATGCAGAACCACGGCGGGTGGGTGAAAC AGGGCTTCGACCAGTGCGCGCGCGACGTGAAGCAGCGTGCCGAAGCGCTCCACGCGGCACGCCGGCGCAACAACGCGTGA
Upstream 100 bases:
>100_bases GCACCCGTCACGCGCGCCGACCGATATCGGCGCGGCTCCTTCCGACCGCCGCGACGCTTCCCGCCACCCGGGCACGCGCG GCTTCATCCGATACGCCGCC
Downstream 100 bases:
>100_bases CCGGGAGCCGCCGATGCCCGATCTGCAAACACTGTCCGACCATCACGACATCCGCGAGCTGATCGTCGCGTATTCGACTG CGATCGACACGCGCGACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MTKPSNLVTSITVDIDAPASVVWEVLTDFPRYGEWNTFCVGFETTGKLGDFVHMQVRIPGTETVIPVNEILVAYEPERLL SWEQRPTDDNKDAARRDQYIDAIGAERCRYFTTDQFLGLNADTIMQNHGGWVKQGFDQCARDVKQRAEALHAARRRNNA
Sequences:
>Translated_159_residues MTKPSNLVTSITVDIDAPASVVWEVLTDFPRYGEWNTFCVGFETTGKLGDFVHMQVRIPGTETVIPVNEILVAYEPERLL SWEQRPTDDNKDAARRDQYIDAIGAERCRYFTTDQFLGLNADTIMQNHGGWVKQGFDQCARDVKQRAEALHAARRRNNA >Mature_158_residues TKPSNLVTSITVDIDAPASVVWEVLTDFPRYGEWNTFCVGFETTGKLGDFVHMQVRIPGTETVIPVNEILVAYEPERLLS WEQRPTDDNKDAARRDQYIDAIGAERCRYFTTDQFLGLNADTIMQNHGGWVKQGFDQCARDVKQRAEALHAARRRNNA
Specific function: Unknown
COG id: COG4891
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18077; Mature: 17946
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPSNLVTSITVDIDAPASVVWEVLTDFPRYGEWNTFCVGFETTGKLGDFVHMQVRIPG CCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCC TETVIPVNEILVAYEPERLLSWEQRPTDDNKDAARRDQYIDAIGAERCRYFTTDQFLGLN CCEEEEHHHEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCC ADTIMQNHGGWVKQGFDQCARDVKQRAEALHAARRRNNA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TKPSNLVTSITVDIDAPASVVWEVLTDFPRYGEWNTFCVGFETTGKLGDFVHMQVRIPG CCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCC TETVIPVNEILVAYEPERLLSWEQRPTDDNKDAARRDQYIDAIGAERCRYFTTDQFLGLN CCEEEEHHHEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCC ADTIMQNHGGWVKQGFDQCARDVKQRAEALHAARRRNNA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA