| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is gltI [H]
Identifier: 78066952
GI number: 78066952
Start: 2569347
End: 2570267
Strand: Direct
Name: gltI [H]
Synonym: Bcep18194_A5483
Alternate gene names: 78066952
Gene position: 2569347-2570267 (Clockwise)
Preceding gene: 78066940
Following gene: 78066955
Centisome position: 69.55
GC content: 66.34
Gene sequence:
>921_bases ATGCCCTTCCCGCCACGATTCGCCGCCCGATTCGTCCGCCCTCTGCTGTTCGCCGCGTGCGCACTCGCATGCGGCGCGTC GCTCGCCGCGGAGCCGCTGTCGGGCACGCTCGATAAGATCCGGCAGAGCAACCTGATCTCGATCGGCCACCGCGAAACGT CGGTGCCGTTCTCCTACGCCGACGCGAACGGCAAGGTCATCGGCTTCTCGCAGGACCTGTGCGACCGCGTGATCGCCGCC GTGAAAGCGCGCACCGGCAAGCCCGACCTGCAGGTGCGCTTCATCCCCGTCACGTCGCAGAACCGCATTCCGCTCGTGCA GAACGGCACCGTCGATCTCGAATGCGGCGTCACCACGAACCTCGCCGCGCGACACGCGCAGGTCGCGTTCTCGACCACCT TCTTCGTCGCGACGACGCGCCTGCTCACGCGCACGAACTCCGGCATCCGCGACTTCCCCGATCTCGCCGGCAAGACGGTC GTGACGAACCAGGGCACGACGTCCGAGCGCCTGCTGCGCAAGATGAACGAGGAAAAGAAGATGAACATGCGGATCATCAG CGCGAAGGACTATGGCGAAGGACGCCTCACGCTCGAATCGGGCCGTGCGGCCGCGTACATGATGGACGACGTGCTGCTCG CGGGCGTGCGCCAGCTCGCGGCGAAGCCGGCCGACTGGCAGATCGTCGGCACGCCGCAATCGTCGGAAGCCTACGGGTTC ATGCTGCGCAAGGACGATCCGCAGTTCAAGGCGCTCGTCGACGGCGTGCTCGTGCAGTTGATGAAGCGCGGCGAGATCGA CACGCTGTACGACAAGTGGTTCACGAAGCCGGTGCCGCCGAAGGGGCTGTCGTTCGACTTCGCGATGAGCGACGTGATCA AGGCGCGCTATGCGGCGCCGAACGACGCGCCGCTCGAATGA
Upstream 100 bases:
>100_bases GCGGCCCGCCGAATCGGCCCGCACGATCCGACGCTTAACAGTTGTTGCAATTATTTTGTCTTTGGCAACATACGGATCAT CATTCGCCACGGAGACCGCC
Downstream 100 bases:
>100_bases GCGTCGCGCGCGGATCCCGGCTCACGCACGCGTCCACGCGACGCACGCCGCGTAGCCGGGCGCCGCGTCGAGCCACGCCG CCTCGAACGCCGCGACGCCG
Product: ABC amino acid transporter, periplasmic ligand binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MPFPPRFAARFVRPLLFAACALACGASLAAEPLSGTLDKIRQSNLISIGHRETSVPFSYADANGKVIGFSQDLCDRVIAA VKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAFSTTFFVATTRLLTRTNSGIRDFPDLAGKTV VTNQGTTSERLLRKMNEEKKMNMRIISAKDYGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQIVGTPQSSEAYGF MLRKDDPQFKALVDGVLVQLMKRGEIDTLYDKWFTKPVPPKGLSFDFAMSDVIKARYAAPNDAPLE
Sequences:
>Translated_306_residues MPFPPRFAARFVRPLLFAACALACGASLAAEPLSGTLDKIRQSNLISIGHRETSVPFSYADANGKVIGFSQDLCDRVIAA VKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAFSTTFFVATTRLLTRTNSGIRDFPDLAGKTV VTNQGTTSERLLRKMNEEKKMNMRIISAKDYGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQIVGTPQSSEAYGF MLRKDDPQFKALVDGVLVQLMKRGEIDTLYDKWFTKPVPPKGLSFDFAMSDVIKARYAAPNDAPLE >Mature_305_residues PFPPRFAARFVRPLLFAACALACGASLAAEPLSGTLDKIRQSNLISIGHRETSVPFSYADANGKVIGFSQDLCDRVIAAV KARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAFSTTFFVATTRLLTRTNSGIRDFPDLAGKTVV TNQGTTSERLLRKMNEEKKMNMRIISAKDYGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQIVGTPQSSEAYGFM LRKDDPQFKALVDGVLVQLMKRGEIDTLYDKWFTKPVPPKGLSFDFAMSDVIKARYAAPNDAPLE
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=270, Percent_Identity=59.2592592592593, Blast_Score=342, Evalue=2e-95, Organism=Escherichia coli, GI1788649, Length=268, Percent_Identity=27.2388059701493, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1788228, Length=265, Percent_Identity=23.0188679245283, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 33522; Mature: 33391
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFPPRFAARFVRPLLFAACALACGASLAAEPLSGTLDKIRQSNLISIGHRETSVPFSYA CCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCEEEECCCCCCCCEEEE DANGKVIGFSQDLCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTN CCCCCEEEECHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEECCCEEEECCCCCC LAARHAQVAFSTTFFVATTRLLTRTNSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEECCCCCHHHHHHHHCHHHC MNMRIISAKDYGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQIVGTPQSSEAYGF CCEEEEEECCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEE MLRKDDPQFKALVDGVLVQLMKRGEIDTLYDKWFTKPVPPKGLSFDFAMSDVIKARYAAP EEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHCCC NDAPLE CCCCCC >Mature Secondary Structure PFPPRFAARFVRPLLFAACALACGASLAAEPLSGTLDKIRQSNLISIGHRETSVPFSYA CCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCEEEECCCCCCCCEEEE DANGKVIGFSQDLCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTN CCCCCEEEECHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEECCCEEEECCCCCC LAARHAQVAFSTTFFVATTRLLTRTNSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEECCCCCHHHHHHHHCHHHC MNMRIISAKDYGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQIVGTPQSSEAYGF CCEEEEEECCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEE MLRKDDPQFKALVDGVLVQLMKRGEIDTLYDKWFTKPVPPKGLSFDFAMSDVIKARYAAP EEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHCCC NDAPLE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]