| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066522
Identifier: 78066522
GI number: 78066522
Start: 2090056
End: 2091246
Strand: Reverse
Name: 78066522
Synonym: Bcep18194_A5053
Alternate gene names: NA
Gene position: 2091246-2090056 (Counterclockwise)
Preceding gene: 78066523
Following gene: 78066521
Centisome position: 56.61
GC content: 67.25
Gene sequence:
>1191_bases ATGACCGTATGCACTTCCTTTCCGCCGTTGACGATCCGCGGCCGCACCTTGTTGCCTGTCGTGCAGGGCGGCATGGGCGT CGGCATCTCCGCGCACCGGCTGGCGGGCAGCGTCGCGCGCGAAGGCGCGGTCGGCACGATTGCGAGCATCGACCTGCGTC ACCATCATGCGGACCTGCTCGCGCGTTGCCGCGCGCAACCCGATCGCGCGACGCTCGAGGCCGCGAACCTCGAGGCACTC GCTCGCGAGATCCGTCTTGCGAAGACCTACAGCGAAGGGCGCGGGATGATCGCGGTCAACGTGATGAAGGCCGTGAGCGC GCATGCAGACTACGTGCGCGTCGCATGCGACGAAGGCGCCGATGCGATCGTGATGGGCGCGGGCTTGCCGCTCGACCTGC CCGATCTCACGCAAGGACACGACATCGCGCTGATTCCGATCCTGTCGGACAGCCGCGGGATCGCGCTCGTGCTGAAGAAG TGGATGAAGAAGGGGCGCCTGCCCGACGCGATCGTGATCGAGCATCCGGCGCATGCGGGCGGCCATCTCGGCGTCACGCA GATCGACGACATGCACGACGGCCGCTTCGATTTCGCGCGCGTGCTCGACGAGACCGCGCAGGTGATGGCGTCGCTCGGGC TCGCGCGTGAAACGATCCCCTTGATCGTTGCGGGCGGGATCAACAGTCATGACACGGTGCGTGCGGCGTTCGAGGCGGGC GCGAATGGCGTGCAGGTGGGGACGCCGTTCGCGGTGACGGAAGAAGGCGATGCGCATCCGCACTTCAAGCGCGTGCTGGC CGATGCGACGCCCGACGACATCGTCGAATTCGTCAGCGTGACGGGGTTGCCCGCACGCGCGGTGAAGACGCCGTGGCTCG ATCGTTACCTGCGCAACGAGACACGCATCCGCACCAAGCTCGGCGCGCTGAAGCAGCGTTGCCCGACCGCGCTCGAATGC CTGAGCGTATGCGGCTTGCGCGACGGCATCGAGAAGTTCGGCCATTTCTGCATCGACACGCGGCTGGCCGCTGCATTGCG CGGCGACGTCGCGAACGGGCTGTTCTTCCGTGGCCGCGAAGCGTTGCCGTTCGGCCGTGCGATCCGCAGCGTGCGCGATC TGCTCGACCTGCTGCTGACGGGCTGTGCGACGGAGCCTGCGGCAAACCGTCCCACGTTTACGCTGGCTTGA
Upstream 100 bases:
>100_bases GAAACGGCACGCTTGCGTGCCGTTTTTTATTGACGGCCGTCAAGGTGCGCGTCGGTGGATCGTCGATCATCGCGGTTCCG ATGTTCCGACGAGGTTTCAG
Downstream 100 bases:
>100_bases CGGATATCAAGACGATGAAAAGACCCTACAGGGAGAATGGAAACCATTCTTTGGGGGTCCGTACCATGCATAAAACGATT CGAACTTGTGTCACCGCAGC
Product: 2-nitropropane dioxygenase, NPD
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Oxidoreductase; Oxidoreductase 2-Nitropropane Dioxygenase Family; Enoyl-(Acyl-Carrier-Protein) Reductase II; Oxidoreductase; 2-Nitropropane Dioxygenase-Like Protein; 2-Nitropropane Dioxygenase Npd; Dioxygenase Related 2-Nitropropane Dioxygenase; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; Enoyl-ACP Reductase; Enoyl-[Acyl-Carrier Protein] Reductase; Trans-2-Enoyl-ACP Reductase; Dioxygenases Related 2-Nitropropane Dioxygenase; Flavin-Containing Oxidoreductase; 2-Nitropropane Dioxygenase Family; Dioxygenase; 2-Nitropropane Dioxygenase-Like Dioxygenase
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MTVCTSFPPLTIRGRTLLPVVQGGMGVGISAHRLAGSVAREGAVGTIASIDLRHHHADLLARCRAQPDRATLEAANLEAL AREIRLAKTYSEGRGMIAVNVMKAVSAHADYVRVACDEGADAIVMGAGLPLDLPDLTQGHDIALIPILSDSRGIALVLKK WMKKGRLPDAIVIEHPAHAGGHLGVTQIDDMHDGRFDFARVLDETAQVMASLGLARETIPLIVAGGINSHDTVRAAFEAG ANGVQVGTPFAVTEEGDAHPHFKRVLADATPDDIVEFVSVTGLPARAVKTPWLDRYLRNETRIRTKLGALKQRCPTALEC LSVCGLRDGIEKFGHFCIDTRLAAALRGDVANGLFFRGREALPFGRAIRSVRDLLDLLLTGCATEPAANRPTFTLA
Sequences:
>Translated_396_residues MTVCTSFPPLTIRGRTLLPVVQGGMGVGISAHRLAGSVAREGAVGTIASIDLRHHHADLLARCRAQPDRATLEAANLEAL AREIRLAKTYSEGRGMIAVNVMKAVSAHADYVRVACDEGADAIVMGAGLPLDLPDLTQGHDIALIPILSDSRGIALVLKK WMKKGRLPDAIVIEHPAHAGGHLGVTQIDDMHDGRFDFARVLDETAQVMASLGLARETIPLIVAGGINSHDTVRAAFEAG ANGVQVGTPFAVTEEGDAHPHFKRVLADATPDDIVEFVSVTGLPARAVKTPWLDRYLRNETRIRTKLGALKQRCPTALEC LSVCGLRDGIEKFGHFCIDTRLAAALRGDVANGLFFRGREALPFGRAIRSVRDLLDLLLTGCATEPAANRPTFTLA >Mature_395_residues TVCTSFPPLTIRGRTLLPVVQGGMGVGISAHRLAGSVAREGAVGTIASIDLRHHHADLLARCRAQPDRATLEAANLEALA REIRLAKTYSEGRGMIAVNVMKAVSAHADYVRVACDEGADAIVMGAGLPLDLPDLTQGHDIALIPILSDSRGIALVLKKW MKKGRLPDAIVIEHPAHAGGHLGVTQIDDMHDGRFDFARVLDETAQVMASLGLARETIPLIVAGGINSHDTVRAAFEAGA NGVQVGTPFAVTEEGDAHPHFKRVLADATPDDIVEFVSVTGLPARAVKTPWLDRYLRNETRIRTKLGALKQRCPTALECL SVCGLRDGIEKFGHFCIDTRLAAALRGDVANGLFFRGREALPFGRAIRSVRDLLDLLLTGCATEPAANRPTFTLA
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42332; Mature: 42201
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVCTSFPPLTIRGRTLLPVVQGGMGVGISAHRLAGSVAREGAVGTIASIDLRHHHADLL CCCCCCCCCEEECCCEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHH ARCRAQPDRATLEAANLEALAREIRLAKTYSEGRGMIAVNVMKAVSAHADYVRVACDEGA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCEEEEEECCCC DAIVMGAGLPLDLPDLTQGHDIALIPILSDSRGIALVLKKWMKKGRLPDAIVIEHPAHAG CEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC GHLGVTQIDDMHDGRFDFARVLDETAQVMASLGLARETIPLIVAGGINSHDTVRAAFEAG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCCCEEEECCCCCCHHHHHHHHCC ANGVQVGTPFAVTEEGDAHPHFKRVLADATPDDIVEFVSVTGLPARAVKTPWLDRYLRNE CCCEEECCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHH TRIRTKLGALKQRCPTALECLSVCGLRDGIEKFGHFCIDTRLAAALRGDVANGLFFRGRE HHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC ALPFGRAIRSVRDLLDLLLTGCATEPAANRPTFTLA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECC >Mature Secondary Structure TVCTSFPPLTIRGRTLLPVVQGGMGVGISAHRLAGSVAREGAVGTIASIDLRHHHADLL CCCCCCCCEEECCCEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHH ARCRAQPDRATLEAANLEALAREIRLAKTYSEGRGMIAVNVMKAVSAHADYVRVACDEGA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCEEEEEECCCC DAIVMGAGLPLDLPDLTQGHDIALIPILSDSRGIALVLKKWMKKGRLPDAIVIEHPAHAG CEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC GHLGVTQIDDMHDGRFDFARVLDETAQVMASLGLARETIPLIVAGGINSHDTVRAAFEAG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCCCEEEECCCCCCHHHHHHHHCC ANGVQVGTPFAVTEEGDAHPHFKRVLADATPDDIVEFVSVTGLPARAVKTPWLDRYLRNE CCCEEECCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHH TRIRTKLGALKQRCPTALECLSVCGLRDGIEKFGHFCIDTRLAAALRGDVANGLFFRGRE HHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC ALPFGRAIRSVRDLLDLLLTGCATEPAANRPTFTLA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA