Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

Click here to switch to the map view.

The map label for this gene is 78066499

Identifier: 78066499

GI number: 78066499

Start: 2064300

End: 2065064

Strand: Reverse

Name: 78066499

Synonym: Bcep18194_A5030

Alternate gene names: NA

Gene position: 2065064-2064300 (Counterclockwise)

Preceding gene: 78066500

Following gene: 78066498

Centisome position: 55.9

GC content: 71.37

Gene sequence:

>765_bases
ATGACAGACATCGTGATCGTGGCGAGCGCATTCGGGATGGACCGCGTGCGTCAGGAGGGCCACAGCGCATTCATCGCGAC
CGCGGCGGCATCCGGTGCGACCGGTTTCGAGGTGCGGCGCGAACTGTTCGCGTCGGAAGCGGAAGCCGCGCCTGGCGCGC
TGGCCGCGCTCGGCGCGCAACTGGCCAGCCACGGGCTGTGGTCGGTTTTTTCAACGCCGGCCAACCTGTACACGGACACC
GGGGCACTCGATGCGGACGCATTGCGCAGCGCGCTCGCCGAAGCCGACGCGCTCGGCGCGCGCTTCGTGAAATTCCAGCT
CGGGGGTTTTGCCGGCGACGCGCACGCGGCCGACATCGTCGCGCTGTCGCGCGGCGCCCGGGCCCGCGTGGTGGTCGAGA
ACGGCCAGCTTCCGGTCGGCGGCGCGCTCGCGCAATTCCGTGGACTGTTCGAGGCGCTGGCCGCGGCGGGCATGCCCGAT
GCACTCGGGATGACCTTCGACATCGGCAACTGGCAGTGGCCGGGCGAAGCGCCGCTTGATTGCGCGCAAGTCCTTGCGCC
GCATGTGGAATACATTCATTGCAAGGCAGTCGCGGGCGAGGGTGCGCGCCGTTTCGCCGCTGCGCCGGCGCCGAACGACC
CGCTCGTGACCGGCGTGCTCGCGGTGCTGCCGCAGCAGGCGCCGCGCGGCATCGAGTTCCCGTTCGACGCGGCCGACCTG
GCGGGCGATGCGTGCCGGCGCGTCGCGTGGCTCGCCACCGCGTGA

Upstream 100 bases:

>100_bases
CCCCGTCTTAGGGATTTCCTCTATGGCGTGGGTCTGACGCGAAGCGCACCATCCGTCTCAAGCAAATGGAACCGGTTCCA
TTCCGGTGAAAAAGGGCAAA

Downstream 100 bases:

>100_bases
CGGCGGAAGGATCCTGGAGAGTTCATTCATGAAAGCAGCACTCGATGTCGTGACCTACGGCGAAGCGATGGCGATGTTCG
TCGCAACCGAACCCGGCCAT

Product: xylose isomerase-like TIM barrel

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Epimerase; Epimerase KguE; Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase-Like TIM Barrel; Sugar Isomerase; Epimerase KguE-Like; Sugar Phosphate Isomerase/Epimerase; Sugar Or Sugar Phosphate Isomerase; Sugar Phosphate Isomerases/Epimerase

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MTDIVIVASAFGMDRVRQEGHSAFIATAAASGATGFEVRRELFASEAEAAPGALAALGAQLASHGLWSVFSTPANLYTDT
GALDADALRSALAEADALGARFVKFQLGGFAGDAHAADIVALSRGARARVVVENGQLPVGGALAQFRGLFEALAAAGMPD
ALGMTFDIGNWQWPGEAPLDCAQVLAPHVEYIHCKAVAGEGARRFAAAPAPNDPLVTGVLAVLPQQAPRGIEFPFDAADL
AGDACRRVAWLATA

Sequences:

>Translated_254_residues
MTDIVIVASAFGMDRVRQEGHSAFIATAAASGATGFEVRRELFASEAEAAPGALAALGAQLASHGLWSVFSTPANLYTDT
GALDADALRSALAEADALGARFVKFQLGGFAGDAHAADIVALSRGARARVVVENGQLPVGGALAQFRGLFEALAAAGMPD
ALGMTFDIGNWQWPGEAPLDCAQVLAPHVEYIHCKAVAGEGARRFAAAPAPNDPLVTGVLAVLPQQAPRGIEFPFDAADL
AGDACRRVAWLATA
>Mature_253_residues
TDIVIVASAFGMDRVRQEGHSAFIATAAASGATGFEVRRELFASEAEAAPGALAALGAQLASHGLWSVFSTPANLYTDTG
ALDADALRSALAEADALGARFVKFQLGGFAGDAHAADIVALSRGARARVVVENGQLPVGGALAQFRGLFEALAAAGMPDA
LGMTFDIGNWQWPGEAPLDCAQVLAPHVEYIHCKAVAGEGARRFAAAPAPNDPLVTGVLAVLPQQAPRGIEFPFDAADLA
GDACRRVAWLATA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26080; Mature: 25948

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIVIVASAFGMDRVRQEGHSAFIATAAASGATGFEVRRELFASEAEAAPGALAALGAQ
CCCEEEEECHHCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
LASHGLWSVFSTPANLYTDTGALDADALRSALAEADALGARFVKFQLGGFAGDAHAADIV
HHHCCHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHH
ALSRGARARVVVENGQLPVGGALAQFRGLFEALAAAGMPDALGMTFDIGNWQWPGEAPLD
HHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEECCCCCCHH
CAQVLAPHVEYIHCKAVAGEGARRFAAAPAPNDPLVTGVLAVLPQQAPRGIEFPFDAADL
HHHHHHHHHHEEEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
AGDACRRVAWLATA
HHHHHHHHHHHCCC
>Mature Secondary Structure 
TDIVIVASAFGMDRVRQEGHSAFIATAAASGATGFEVRRELFASEAEAAPGALAALGAQ
CCEEEEECHHCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
LASHGLWSVFSTPANLYTDTGALDADALRSALAEADALGARFVKFQLGGFAGDAHAADIV
HHHCCHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHH
ALSRGARARVVVENGQLPVGGALAQFRGLFEALAAAGMPDALGMTFDIGNWQWPGEAPLD
HHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEECCCCCCHH
CAQVLAPHVEYIHCKAVAGEGARRFAAAPAPNDPLVTGVLAVLPQQAPRGIEFPFDAADL
HHHHHHHHHHEEEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
AGDACRRVAWLATA
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA