| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is plcN [H]
Identifier: 78065750
GI number: 78065750
Start: 1213384
End: 1215633
Strand: Reverse
Name: plcN [H]
Synonym: Bcep18194_A4278
Alternate gene names: 78065750
Gene position: 1215633-1213384 (Counterclockwise)
Preceding gene: 78065751
Following gene: 78065749
Centisome position: 32.91
GC content: 68.09
Gene sequence:
>2250_bases ATGCTCGCGGCGGCACGACCCGGCGCAGCCGCATCCTGCGACCCGGGCGCGCTCTTCCAGCAGGTCCTGCCAATCGGCTC CCTCCTTTACCGCACGATAACGACCATGACCCGATCGAACCGTCGTGACTTCCTGCGCGTCGCTGCCGGCACCGCCGGCG CCGCCGCGCTGAACCTGTTTCCGCCCGTGATTCGCGATGCGCTTGCGATTCCCGCGAACCGCCGCACCGGCACCATCCGC GATATCGAACACATCGTGATCCTGATGCAGGAGAACCGCTCGTTCGACCACTACTTCGGCACGATGCGTGGTGTCCGCGG CTTTGGTGACCCGCGCCCGCTGCGCCTCGCGAACGGCAAGTCGGTGTTCCACCAGCCGGTCGGCCCGGCCGAGCTGCTGC CGTTCCATCCGGGCGCGGACAAGCTCGGCCTGCAGTTCCTGCAGGACCTGCCGCACGGCTGGCAGGACATGCACGCCGCC TGGAACAAGGGCCGCTACGACCAGTGGGTGCCGAACAAGGGCACCACGACGATGGCGTACCTGAAGCGCGACGACATCCC GTTCCACTACCAGCTCGCCGATGCGTTCACGATCTGCGACGCGTACCACTGCGCGATCCCGAGCTCGACCGATCCGAACC GCTACTACATGTGGACGGGCTACGTCGGCAACGACGGCACGGGCGGCGGCCCGGTGCTCGGCAACGAGGAAGCGGGCTAC GGCTGGACGACCTATCCGGAAGTGCTGGAGAACGCCGGCGTGTCGTGGAAGATCTACCAGGACGTCGGCACCGGCCTGAA CGCCGCCGGGTCGTGGGGCTGGACGCAGAACCCGTACATCGGCAACTACGGCGACAACTCGCTGCTCTACTTCAACCAGT ACCGCAACGCGCTGCCCGGCACGCCGCTGTACGACAAGGCGCGCACCGGCACCAACATCAGCGCGGGCGGCACGCTGTTC GACGTGCTGCAGCAGGACGTGAAGAACGGCACGCTGCCGCAGGTGTCGTGGATCTGCGCGCCGGAAGCGTATTCGGAGCA TCCGAACTGGCCGGCGAACTACGGCGCGTGGTACATCGAGCAGGTGCTGCAGGCGCTCGTGTCGAATCCGGAGGTATGGA GCAAGACCGCGCTCTTCATCACGTACGACGAAAACGACGGCTTCTTCGACCACGTGCAGCCGCCGTTCGCGCCGCAGTCG CGCGACAACGGGCTGTCGACGGTCGCGACGACCAACGAGGTGTTCCCCGGCGACGCATCGCACATGGCAGGCCCGTACGG GCTCGGGCCGCGCGTGCCGATGCTCGTCGTGTCGCCGTGGACGAAGGGCGGCTGGGTCTGCTCGCAGACCTACGATCACA CGTCGCTGCTGCAATTCATCGAGGCACGTTTCGGCGCGCAATACCCGGTCAAGGCCGGCAACATCTCGCCGTGGCGTCGC ACGGTGTGCGGCGACCTGACCGCCGCGTTCGATTTCGCGACGGCCGACGCCGGCTGGCCGAAGCTGCCGGACACGAGCGG CTACGCGCCGCCCGACCGCCTGCGCCATCCCGACTACATCCCCGTGCCGCCGGTGTTTCAGAAGCTGCCGAAGCAGGAGG CCGGGCTGCGTCCGGCGCGTGCGCTGCCGTACGAGCTGTTCGCGCACGGCCGCGTCGAATCGGTGAACGGCCTGTTCCGG CTGACCTTCGCGAACACGGGCCGCGCGGGCGCGTCGTTCCAGGTGCAGTCACGCAACCGTCTCGACGGCCCGTGGGCTTA CACGGTCGAAGCCGGCAAGCGGATCGATGACACGTGGAGCGCCGCGGCATCGCTCGGCCTGTACGACCTCGACGTGTACG GCCCGAACGGCTTCTACTGCCATTTCCGCGGCCCGTTCGCGACCGGTGTCGGCAGCGCGAACGTGAACCCCGAGGTGATC TACGGCTACGACGTCGCGAACGGCAACATCACGCTGCGCCTGATGAACCGCGGCCACAAGGCCGTGCGGCTCAAGGTCAC GAACGCGTACGGCCACGGCCGCGCGCGCACGTTCGACCTCGCACCGGGCCAGCAGATCGACGACTACTGGGATCTGCGCG GCAGCCACGGCTGGTATGACCTGACCGTCAGTGACGGCCGGCTGCTCGGCTTCCTGCGCCGCTTCGCGGGCCACGTCGAG ACGGGCCGCCCGAGCATCAGCGATCCGCTGATCCGCACGCACGCATCGCACGACGATGCCGAAGCCGCATCGGACGCCCT GTCCGACTGA
Upstream 100 bases:
>100_bases CGCGACTGCCGGCGATAGTTGTCCCGACGCTGCTTCGAGATCGCTTCGATGCGGATGCAAACGTTTCCGGACTTCACATG AATGACACCGATTCCTCGCT
Downstream 100 bases:
>100_bases CGGCGTCCCGTGCGCGGCGCGGCCCCGGCGGGCCGCGCCGCCTCCCTGCACCTCCTCCCTCTCCCCCCGTTCCGTTCGCG ACGGGAAACTCCCGATACCG
Product: phospholipase C'
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 749; Mature: 749
Protein sequence:
>749_residues MLAAARPGAAASCDPGALFQQVLPIGSLLYRTITTMTRSNRRDFLRVAAGTAGAAALNLFPPVIRDALAIPANRRTGTIR DIEHIVILMQENRSFDHYFGTMRGVRGFGDPRPLRLANGKSVFHQPVGPAELLPFHPGADKLGLQFLQDLPHGWQDMHAA WNKGRYDQWVPNKGTTTMAYLKRDDIPFHYQLADAFTICDAYHCAIPSSTDPNRYYMWTGYVGNDGTGGGPVLGNEEAGY GWTTYPEVLENAGVSWKIYQDVGTGLNAAGSWGWTQNPYIGNYGDNSLLYFNQYRNALPGTPLYDKARTGTNISAGGTLF DVLQQDVKNGTLPQVSWICAPEAYSEHPNWPANYGAWYIEQVLQALVSNPEVWSKTALFITYDENDGFFDHVQPPFAPQS RDNGLSTVATTNEVFPGDASHMAGPYGLGPRVPMLVVSPWTKGGWVCSQTYDHTSLLQFIEARFGAQYPVKAGNISPWRR TVCGDLTAAFDFATADAGWPKLPDTSGYAPPDRLRHPDYIPVPPVFQKLPKQEAGLRPARALPYELFAHGRVESVNGLFR LTFANTGRAGASFQVQSRNRLDGPWAYTVEAGKRIDDTWSAAASLGLYDLDVYGPNGFYCHFRGPFATGVGSANVNPEVI YGYDVANGNITLRLMNRGHKAVRLKVTNAYGHGRARTFDLAPGQQIDDYWDLRGSHGWYDLTVSDGRLLGFLRRFAGHVE TGRPSISDPLIRTHASHDDAEAASDALSD
Sequences:
>Translated_749_residues MLAAARPGAAASCDPGALFQQVLPIGSLLYRTITTMTRSNRRDFLRVAAGTAGAAALNLFPPVIRDALAIPANRRTGTIR DIEHIVILMQENRSFDHYFGTMRGVRGFGDPRPLRLANGKSVFHQPVGPAELLPFHPGADKLGLQFLQDLPHGWQDMHAA WNKGRYDQWVPNKGTTTMAYLKRDDIPFHYQLADAFTICDAYHCAIPSSTDPNRYYMWTGYVGNDGTGGGPVLGNEEAGY GWTTYPEVLENAGVSWKIYQDVGTGLNAAGSWGWTQNPYIGNYGDNSLLYFNQYRNALPGTPLYDKARTGTNISAGGTLF DVLQQDVKNGTLPQVSWICAPEAYSEHPNWPANYGAWYIEQVLQALVSNPEVWSKTALFITYDENDGFFDHVQPPFAPQS RDNGLSTVATTNEVFPGDASHMAGPYGLGPRVPMLVVSPWTKGGWVCSQTYDHTSLLQFIEARFGAQYPVKAGNISPWRR TVCGDLTAAFDFATADAGWPKLPDTSGYAPPDRLRHPDYIPVPPVFQKLPKQEAGLRPARALPYELFAHGRVESVNGLFR LTFANTGRAGASFQVQSRNRLDGPWAYTVEAGKRIDDTWSAAASLGLYDLDVYGPNGFYCHFRGPFATGVGSANVNPEVI YGYDVANGNITLRLMNRGHKAVRLKVTNAYGHGRARTFDLAPGQQIDDYWDLRGSHGWYDLTVSDGRLLGFLRRFAGHVE TGRPSISDPLIRTHASHDDAEAASDALSD >Mature_749_residues MLAAARPGAAASCDPGALFQQVLPIGSLLYRTITTMTRSNRRDFLRVAAGTAGAAALNLFPPVIRDALAIPANRRTGTIR DIEHIVILMQENRSFDHYFGTMRGVRGFGDPRPLRLANGKSVFHQPVGPAELLPFHPGADKLGLQFLQDLPHGWQDMHAA WNKGRYDQWVPNKGTTTMAYLKRDDIPFHYQLADAFTICDAYHCAIPSSTDPNRYYMWTGYVGNDGTGGGPVLGNEEAGY GWTTYPEVLENAGVSWKIYQDVGTGLNAAGSWGWTQNPYIGNYGDNSLLYFNQYRNALPGTPLYDKARTGTNISAGGTLF DVLQQDVKNGTLPQVSWICAPEAYSEHPNWPANYGAWYIEQVLQALVSNPEVWSKTALFITYDENDGFFDHVQPPFAPQS RDNGLSTVATTNEVFPGDASHMAGPYGLGPRVPMLVVSPWTKGGWVCSQTYDHTSLLQFIEARFGAQYPVKAGNISPWRR TVCGDLTAAFDFATADAGWPKLPDTSGYAPPDRLRHPDYIPVPPVFQKLPKQEAGLRPARALPYELFAHGRVESVNGLFR LTFANTGRAGASFQVQSRNRLDGPWAYTVEAGKRIDDTWSAAASLGLYDLDVYGPNGFYCHFRGPFATGVGSANVNPEVI YGYDVANGNITLRLMNRGHKAVRLKVTNAYGHGRARTFDLAPGQQIDDYWDLRGSHGWYDLTVSDGRLLGFLRRFAGHVE TGRPSISDPLIRTHASHDDAEAASDALSD
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 82384; Mature: 82384
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAAARPGAAASCDPGALFQQVLPIGSLLYRTITTMTRSNRRDFLRVAAGTAGAAALNLF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCHHHHHHH PPVIRDALAIPANRRTGTIRDIEHIVILMQENRSFDHYFGTMRGVRGFGDPRPLRLANGK HHHHHHHHCCCCCCCCCCHHCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCC SVFHQPVGPAELLPFHPGADKLGLQFLQDLPHGWQDMHAAWNKGRYDQWVPNKGTTTMAY HHHCCCCCCHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEE LKRDDIPFHYQLADAFTICDAYHCAIPSSTDPNRYYMWTGYVGNDGTGGGPVLGNEEAGY EECCCCCEEEEHHHHHHHHHHHEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC GWTTYPEVLENAGVSWKIYQDVGTGLNAAGSWGWTQNPYIGNYGDNSLLYFNQYRNALPG CCCCCHHHHHCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCCCCC TPLYDKARTGTNISAGGTLFDVLQQDVKNGTLPQVSWICAPEAYSEHPNWPANYGAWYIE CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCCCCCCCCHHHHH QVLQALVSNPEVWSKTALFITYDENDGFFDHVQPPFAPQSRDNGLSTVATTNEVFPGDAS HHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHH HMAGPYGLGPRVPMLVVSPWTKGGWVCSQTYDHTSLLQFIEARFGAQYPVKAGNISPWRR HCCCCCCCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH TVCGDLTAAFDFATADAGWPKLPDTSGYAPPDRLRHPDYIPVPPVFQKLPKQEAGLRPAR HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCHHHHCCCCHH ALPYELFAHGRVESVNGLFRLTFANTGRAGASFQVQSRNRLDGPWAYTVEAGKRIDDTWS CCCHHHHHCCCEECCCCEEEEEEECCCCCCCEEEECCCCCCCCCEEEEECCCCCCCHHHH AAASLGLYDLDVYGPNGFYCHFRGPFATGVGSANVNPEVIYGYDVANGNITLRLMNRGHK HHHHCCEEEEEEECCCCEEEEECCCHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCE AVRLKVTNAYGHGRARTFDLAPGQQIDDYWDLRGSHGWYDLTVSDGRLLGFLRRFAGHVE EEEEEEEECCCCCCEEEEECCCCCCCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCC TGRPSISDPLIRTHASHDDAEAASDALSD CCCCCCCCCHHHHCCCCCHHHHHHHHCCC >Mature Secondary Structure MLAAARPGAAASCDPGALFQQVLPIGSLLYRTITTMTRSNRRDFLRVAAGTAGAAALNLF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCHHHHHHH PPVIRDALAIPANRRTGTIRDIEHIVILMQENRSFDHYFGTMRGVRGFGDPRPLRLANGK HHHHHHHHCCCCCCCCCCHHCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCC SVFHQPVGPAELLPFHPGADKLGLQFLQDLPHGWQDMHAAWNKGRYDQWVPNKGTTTMAY HHHCCCCCCHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEE LKRDDIPFHYQLADAFTICDAYHCAIPSSTDPNRYYMWTGYVGNDGTGGGPVLGNEEAGY EECCCCCEEEEHHHHHHHHHHHEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC GWTTYPEVLENAGVSWKIYQDVGTGLNAAGSWGWTQNPYIGNYGDNSLLYFNQYRNALPG CCCCCHHHHHCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCCCCC TPLYDKARTGTNISAGGTLFDVLQQDVKNGTLPQVSWICAPEAYSEHPNWPANYGAWYIE CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCCCCCCCCHHHHH QVLQALVSNPEVWSKTALFITYDENDGFFDHVQPPFAPQSRDNGLSTVATTNEVFPGDAS HHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHH HMAGPYGLGPRVPMLVVSPWTKGGWVCSQTYDHTSLLQFIEARFGAQYPVKAGNISPWRR HCCCCCCCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH TVCGDLTAAFDFATADAGWPKLPDTSGYAPPDRLRHPDYIPVPPVFQKLPKQEAGLRPAR HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCHHHHCCCCHH ALPYELFAHGRVESVNGLFRLTFANTGRAGASFQVQSRNRLDGPWAYTVEAGKRIDDTWS CCCHHHHHCCCEECCCCEEEEEEECCCCCCCEEEECCCCCCCCCEEEEECCCCCCCHHHH AAASLGLYDLDVYGPNGFYCHFRGPFATGVGSANVNPEVIYGYDVANGNITLRLMNRGHK HHHHCCEEEEEEECCCCEEEEECCCHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCE AVRLKVTNAYGHGRARTFDLAPGQQIDDYWDLRGSHGWYDLTVSDGRLLGFLRRFAGHVE EEEEEEEECCCCCCEEEEECCCCCCCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCC TGRPSISDPLIRTHASHDDAEAASDALSD CCCCCCCCCHHHHCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10523590 [H]