| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is livK [C]
Identifier: 78065749
GI number: 78065749
Start: 1211871
End: 1213418
Strand: Reverse
Name: livK [C]
Synonym: Bcep18194_A4277
Alternate gene names: 78065749
Gene position: 1213418-1211871 (Counterclockwise)
Preceding gene: 78065750
Following gene: 78065747
Centisome position: 32.85
GC content: 67.05
Gene sequence:
>1548_bases ATGCCGAAGCCGCATCGGACGCCCTGTCCGACTGACGGCGTCCCGTGCGCGGCGCGGCCCCGGCGGGCCGCGCCGCCTCC CTGCACCTCCTCCCTCTCCCCCCGTTCCGTTCGCGACGGGAAACTCCCGATACCGGCTGCCGCCGCACGCGCGGAAGCTA TGCGCAAATCCGCACCGAATGCGCGGCGAATTGCCAAGACCCGGGCATATCGGCGACCTATATATCGAGGCGATCGGGGC TCTTCTTCGCGGAGCCTGACGGGAGATTCTTCCGAGGATAACGATGCCGACCTCCCCGCCCGATTCAGAGAAGCGGTCGA ACCGCCCGCCCGTCGCACGCGTTCGGCCCACCCGAGCGCATGCGGTACTTACTCGCAGGTGTCGAACAAGAGGAACAACA TGAAATTCCGTCATTCCCTGCTGTCGGTGTCGATTGCATCCGCGCTTGCCCTCCTCTCGCAACAGGCCGCCCAGGCCGCC GATTCGACCGACGTGAAGGTCGGCTTCGCCGCGCCGCTCACGGGCGTGAACGCCGGTTACGGCAAGGACCTGCAGAACGG CGTGCAGCTCGCGCTCGACGATGCCGCCGCGCAGAAGGTGCAGATCGCCGGCAAGCCCGCGCACTTCAACCTCATCGTGC AGGACGACCAGGCCGACCCGCGCATCGGCGTGCAGGCCGCGCAGGCGCTCGTCGACCAGAACGTGTCGGTCGTGGTCGGC CACTTCAACTCGGGGACGACGATTCCGGCTTCCGTCGTCTACGACAAGGCCGGCATCCCGGTGATCGATCCGGCCGCGAC CAACCCGACGCTCACCGCGCGCGGGCTCGCGAACATGTTCATGGTGATCGCGACCGACGGCCAGAACGCCGGCAACGCGG GCAAGTACGCGGTCGACGTGACGAAGGCGAAGCGCATCGCGATCATCGACGACCGCACCGCGTTCGGCCAGGGCGAGGCC GACGAGTTCGAGAAGGCCGTGAAGGCCGCGGGCGGGAACCTCGTCGGCCGCGAATTCACCAGCAACCAGGCGGTCGACTT CCGCGCGCAGATCACGAGCCTGAAGGCGAAGAACCCCGACCTGATCTTCTTCGGCGGCCTCGACTCGCTCGCCGCGAACT TCATCAAGCAGATGCGCCAGCTCGGGCTGAACGCGCAATTCGTCGGCGGCGGCGGCGTGAAGGACAACGAGTTCATCAAG ATCGCGGGCCCGGCCGCCGAAGGCGCGATGGCGTGGGAATACGGCCGGCCGCTCGACGAGCTGCCGCAAGGGAAGGATTT CGAGCAGCGCTTCAAGAAGCGCTTCGGCGTCGATGTGCTGTCGTACGCGCAATTCGGCTACGACGCGGCGTGGGCGGCGA TCAAGGCGATGCAGGCGGCCGGCTCGACCGACCCGAAGGTCTATCGCCCGGCGCTGAAGAAGATCGACTTCGAAGGGGTC ACCGGCCGCATCTCGTTCGCGAACGACGGCTCGCTGAAGAGCGGGATGTCGACGCTGTACCAGGTGAAGAGCGGCGCGTG GAAGACGATCACGACGAAGGGAGGCTGA
Upstream 100 bases:
>100_bases GGCCGGCTGCTCGGCTTCCTGCGCCGCTTCGCGGGCCACGTCGAGACGGGCCGCCCGAGCATCAGCGATCCGCTGATCCG CACGCACGCATCGCACGACG
Downstream 100 bases:
>100_bases TCGGCGGTGCCGGCGGCCGGCGGCGGAAAAGCCGCCCGGCCCCGGTGATCGATGAAGGGATATCGATCTCGTATGACGAC TGATGTTGAAGCGATTCGAC
Product: branched chain amino acid ABC transporter periplasmic ligand-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 515; Mature: 514
Protein sequence:
>515_residues MPKPHRTPCPTDGVPCAARPRRAAPPPCTSSLSPRSVRDGKLPIPAAAARAEAMRKSAPNARRIAKTRAYRRPIYRGDRG SSSRSLTGDSSEDNDADLPARFREAVEPPARRTRSAHPSACGTYSQVSNKRNNMKFRHSLLSVSIASALALLSQQAAQAA DSTDVKVGFAAPLTGVNAGYGKDLQNGVQLALDDAAAQKVQIAGKPAHFNLIVQDDQADPRIGVQAAQALVDQNVSVVVG HFNSGTTIPASVVYDKAGIPVIDPAATNPTLTARGLANMFMVIATDGQNAGNAGKYAVDVTKAKRIAIIDDRTAFGQGEA DEFEKAVKAAGGNLVGREFTSNQAVDFRAQITSLKAKNPDLIFFGGLDSLAANFIKQMRQLGLNAQFVGGGGVKDNEFIK IAGPAAEGAMAWEYGRPLDELPQGKDFEQRFKKRFGVDVLSYAQFGYDAAWAAIKAMQAAGSTDPKVYRPALKKIDFEGV TGRISFANDGSLKSGMSTLYQVKSGAWKTITTKGG
Sequences:
>Translated_515_residues MPKPHRTPCPTDGVPCAARPRRAAPPPCTSSLSPRSVRDGKLPIPAAAARAEAMRKSAPNARRIAKTRAYRRPIYRGDRG SSSRSLTGDSSEDNDADLPARFREAVEPPARRTRSAHPSACGTYSQVSNKRNNMKFRHSLLSVSIASALALLSQQAAQAA DSTDVKVGFAAPLTGVNAGYGKDLQNGVQLALDDAAAQKVQIAGKPAHFNLIVQDDQADPRIGVQAAQALVDQNVSVVVG HFNSGTTIPASVVYDKAGIPVIDPAATNPTLTARGLANMFMVIATDGQNAGNAGKYAVDVTKAKRIAIIDDRTAFGQGEA DEFEKAVKAAGGNLVGREFTSNQAVDFRAQITSLKAKNPDLIFFGGLDSLAANFIKQMRQLGLNAQFVGGGGVKDNEFIK IAGPAAEGAMAWEYGRPLDELPQGKDFEQRFKKRFGVDVLSYAQFGYDAAWAAIKAMQAAGSTDPKVYRPALKKIDFEGV TGRISFANDGSLKSGMSTLYQVKSGAWKTITTKGG >Mature_514_residues PKPHRTPCPTDGVPCAARPRRAAPPPCTSSLSPRSVRDGKLPIPAAAARAEAMRKSAPNARRIAKTRAYRRPIYRGDRGS SSRSLTGDSSEDNDADLPARFREAVEPPARRTRSAHPSACGTYSQVSNKRNNMKFRHSLLSVSIASALALLSQQAAQAAD STDVKVGFAAPLTGVNAGYGKDLQNGVQLALDDAAAQKVQIAGKPAHFNLIVQDDQADPRIGVQAAQALVDQNVSVVVGH FNSGTTIPASVVYDKAGIPVIDPAATNPTLTARGLANMFMVIATDGQNAGNAGKYAVDVTKAKRIAIIDDRTAFGQGEAD EFEKAVKAAGGNLVGREFTSNQAVDFRAQITSLKAKNPDLIFFGGLDSLAANFIKQMRQLGLNAQFVGGGGVKDNEFIKI AGPAAEGAMAWEYGRPLDELPQGKDFEQRFKKRFGVDVLSYAQFGYDAAWAAIKAMQAAGSTDPKVYRPALKKIDFEGVT GRISFANDGSLKSGMSTLYQVKSGAWKTITTKGG
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=358, Percent_Identity=31.5642458100559, Blast_Score=145, Evalue=7e-36, Organism=Escherichia coli, GI48994941, Length=332, Percent_Identity=30.421686746988, Blast_Score=135, Evalue=6e-33,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 54637; Mature: 54506
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKPHRTPCPTDGVPCAARPRRAAPPPCTSSLSPRSVRDGKLPIPAAAARAEAMRKSAPN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC ARRIAKTRAYRRPIYRGDRGSSSRSLTGDSSEDNDADLPARFREAVEPPARRTRSAHPSA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHCCCCCCC CGTYSQVSNKRNNMKFRHSLLSVSIASALALLSQQAAQAADSTDVKVGFAAPLTGVNAGY CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC GKDLQNGVQLALDDAAAQKVQIAGKPAHFNLIVQDDQADPRIGVQAAQALVDQNVSVVVG CCCHHHCCEEEECHHHHHEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEE HFNSGTTIPASVVYDKAGIPVIDPAATNPTLTARGLANMFMVIATDGQNAGNAGKYAVDV ECCCCCCCCHHEEECCCCCCEECCCCCCCCEEHHHHCCEEEEEEECCCCCCCCCCEEEEE TKAKRIAIIDDRTAFGQGEADEFEKAVKAAGGNLVGREFTSNQAVDFRAQITSLKAKNPD ECCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCEEHHHHHHHHCCCCCC LIFFGGLDSLAANFIKQMRQLGLNAQFVGGGGVKDNEFIKIAGPAAEGAMAWEYGRPLDE EEEECCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEECCCCCCCEEECCCCCHHH LPQGKDFEQRFKKRFGVDVLSYAQFGYDAAWAAIKAMQAAGSTDPKVYRPALKKIDFEGV CCCCCCHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC TGRISFANDGSLKSGMSTLYQVKSGAWKTITTKGG EEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCC >Mature Secondary Structure PKPHRTPCPTDGVPCAARPRRAAPPPCTSSLSPRSVRDGKLPIPAAAARAEAMRKSAPN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC ARRIAKTRAYRRPIYRGDRGSSSRSLTGDSSEDNDADLPARFREAVEPPARRTRSAHPSA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHCCCCCCC CGTYSQVSNKRNNMKFRHSLLSVSIASALALLSQQAAQAADSTDVKVGFAAPLTGVNAGY CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC GKDLQNGVQLALDDAAAQKVQIAGKPAHFNLIVQDDQADPRIGVQAAQALVDQNVSVVVG CCCHHHCCEEEECHHHHHEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEE HFNSGTTIPASVVYDKAGIPVIDPAATNPTLTARGLANMFMVIATDGQNAGNAGKYAVDV ECCCCCCCCHHEEECCCCCCEECCCCCCCCEEHHHHCCEEEEEEECCCCCCCCCCEEEEE TKAKRIAIIDDRTAFGQGEADEFEKAVKAAGGNLVGREFTSNQAVDFRAQITSLKAKNPD ECCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCEEHHHHHHHHCCCCCC LIFFGGLDSLAANFIKQMRQLGLNAQFVGGGGVKDNEFIKIAGPAAEGAMAWEYGRPLDE EEEECCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEECCCCCCCEEECCCCCHHH LPQGKDFEQRFKKRFGVDVLSYAQFGYDAAWAAIKAMQAAGSTDPKVYRPALKKIDFEGV CCCCCCHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC TGRISFANDGSLKSGMSTLYQVKSGAWKTITTKGG EEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA