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The map label for this gene is ydfF [H]

Identifier: 78065673

GI number: 78065673

Start: 1136833

End: 1137540

Strand: Reverse

Name: ydfF [H]

Synonym: Bcep18194_A4201

Alternate gene names: 78065673

Gene position: 1137540-1136833 (Counterclockwise)

Preceding gene: 78065675

Following gene: 78065672

Centisome position: 30.79

GC content: 73.16

Gene sequence:

>708_bases
ATGACCGACCAAGACGACCACCACTTCCCGGGCCTGAGCCGCATCGGCTCGCTGATCGCCGACCCCGGGCGCGCCGCGAT
GCTGTGGGTGCTGATGGACGGCAGCGCGCGACCCGCAGGCGAACTGACAATGATCGCGGGGCTGTCGCCGTCCGCCGCAA
GCGCCCACCTCGCGCGCTTGACCGAAGGCGGCCTGCTCGCGCTCGACGTGCGCGGCCGGCACCGCTACTACCGGATCGCA
TCGGCCGACATCGCGGCCTCGCTCGAGGCGCTCGCGAACGTCGCCCGCGCGGCCGCGCCGCATCGCCCGGTTCCGGCGCC
GTCCCGCACGGTCCCGGCCGAATTGCGCTATGCGCGCACCTGCTACGACCACATGGCCGGCGAACTCGCGGTGCGCATCT
TCGACGGGCTCACCGCGCGCGGCTGGCTGCTGGCCGACGGCGATGCGATCGAGACCACCGAACTCGGCACCCAGGCGCTC
GCGCAATGGGGCATCGACGTCGCGCAGCAGCGCACGCGCCGGCGCCGCTTCGCGTGCGGCTGCCTCGACTGGAGCGAACG
GCGCTCGCATCTCGGCGGCGCACTCGGCGCAGCGCTGCTCGAGAGCTTCTGCGCGCACGGCTGGATCGAGCGCTCCGCAC
GGCCGCGCGTGCTGCGCGTCACCGTGCCCGGACAGCAGGTTTTCGACGGGTGGCTTACGTCCGCTTGA

Upstream 100 bases:

>100_bases
CGACGCCGGCGCCACTGCATTCGACATTTCAACCAAAAGCGAAACATCGAATGCGCGCGCCCACTACACTGAAGCTCATC
CCGCCTGACGAGACACGACG

Downstream 100 bases:

>100_bases
CGCCCGGATTGCGTCTGCACGACAACGGCGCGCGATCGACAGGTTTTGTTACATCGCGTGCCATTCGACTTACAAAACAC
CGAGCATTGAAACAGGCCGA

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MTDQDDHHFPGLSRIGSLIADPGRAAMLWVLMDGSARPAGELTMIAGLSPSAASAHLARLTEGGLLALDVRGRHRYYRIA
SADIAASLEALANVARAAAPHRPVPAPSRTVPAELRYARTCYDHMAGELAVRIFDGLTARGWLLADGDAIETTELGTQAL
AQWGIDVAQQRTRRRRFACGCLDWSERRSHLGGALGAALLESFCAHGWIERSARPRVLRVTVPGQQVFDGWLTSA

Sequences:

>Translated_235_residues
MTDQDDHHFPGLSRIGSLIADPGRAAMLWVLMDGSARPAGELTMIAGLSPSAASAHLARLTEGGLLALDVRGRHRYYRIA
SADIAASLEALANVARAAAPHRPVPAPSRTVPAELRYARTCYDHMAGELAVRIFDGLTARGWLLADGDAIETTELGTQAL
AQWGIDVAQQRTRRRRFACGCLDWSERRSHLGGALGAALLESFCAHGWIERSARPRVLRVTVPGQQVFDGWLTSA
>Mature_234_residues
TDQDDHHFPGLSRIGSLIADPGRAAMLWVLMDGSARPAGELTMIAGLSPSAASAHLARLTEGGLLALDVRGRHRYYRIAS
ADIAASLEALANVARAAAPHRPVPAPSRTVPAELRYARTCYDHMAGELAVRIFDGLTARGWLLADGDAIETTELGTQALA
QWGIDVAQQRTRRRRFACGCLDWSERRSHLGGALGAALLESFCAHGWIERSARPRVLRVTVPGQQVFDGWLTSA

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 25356; Mature: 25225

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQDDHHFPGLSRIGSLIADPGRAAMLWVLMDGSARPAGELTMIAGLSPSAASAHLARL
CCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHH
TEGGLLALDVRGRHRYYRIASADIAASLEALANVARAAAPHRPVPAPSRTVPAELRYART
CCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
CYDHMAGELAVRIFDGLTARGWLLADGDAIETTELGTQALAQWGIDVAQQRTRRRRFACG
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCC
CLDWSERRSHLGGALGAALLESFCAHGWIERSARPRVLRVTVPGQQVFDGWLTSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCC
>Mature Secondary Structure 
TDQDDHHFPGLSRIGSLIADPGRAAMLWVLMDGSARPAGELTMIAGLSPSAASAHLARL
CCCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHH
TEGGLLALDVRGRHRYYRIASADIAASLEALANVARAAAPHRPVPAPSRTVPAELRYART
CCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
CYDHMAGELAVRIFDGLTARGWLLADGDAIETTELGTQALAQWGIDVAQQRTRRRRFACG
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCC
CLDWSERRSHLGGALGAALLESFCAHGWIERSARPRVLRVTVPGQQVFDGWLTSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]