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The map label for this gene is trmD

Identifier: 78065657

GI number: 78065657

Start: 1120644

End: 1121438

Strand: Direct

Name: trmD

Synonym: Bcep18194_A4185

Alternate gene names: 78065657

Gene position: 1120644-1121438 (Clockwise)

Preceding gene: 78065656

Following gene: 78065658

Centisome position: 30.34

GC content: 65.66

Gene sequence:

>795_bases
ATGAACCAGGTTACCGAGAGCGCGGTGCAGTTCGACGTCGTCTCGCTCTTTCCCGAGATGTTCCGTGCACTGACCGACTG
GGGGATCACCAGCCGGGCCGTCAAGCAAGGGCGCTTCGGGCTGCGCACCTGGAATCCGCGTGATTTCACGACGGACAACT
ACCGTACGGTCGACGATCGTCCGTACGGCGGTGGTCCGGGCATGGTGATGCTGGCCAGGCCGCTCGAAGCCGCGATCGAT
GCCGCGAAAGCGGCACAGGCGGAACAGGGTATCGCGAGCACGCGTGTCGTGATGATGTCGCCGCAGGGCGCGCCGCTCAC
GCACGATCGTGCGGTGCGGATGGCGCAGGAGCCCGGTGTCGTCGTGCTGTGCGGCCGCTATGAAGCGATCGACCAGCGCC
TGCTCGATCGTTGCGTCGACGAGGAAATCAGCCTCGGCGATTTCGTCCTGTCCGGCGGAGAATTGCCGGCGATGGCGATG
ATGGATGCAGTCGTGCGGTTGCTGCCCGGTGTGCTGAACGATTCGCTGTCGGCCGTGCAGGACAGTTTCGCCGACGGCCT
GCTCGATTGTCCGCACTACACGCGCCCCGAGGAATACGACGGCGTGCGTGTGCCGGACGTGCTGCTCGGCGGGCATCATG
CCGAGATCGAGCGGTGGCGGCGCCAGGAAGCATTGAGAAATACGTTGCGGAAGCGGCCGGACCTGATCGTCCGGGCGCGC
CGCGAGAAGTTGTTGAGCCGTGCCGACGAGGCGTGGCTTGCGAACCTCGCACGCGAAGCGAAGGACGCCTCCTGA

Upstream 100 bases:

>100_bases
ACCACCGACGAGCGGTTGATTCCGTTCGTCGGCGTATATGTCAAAACGGTGGATCAGGCGGCGCGTCGCATCGTCGTCGA
CTGGGAAGCCGATTACTGAA

Downstream 100 bases:

>100_bases
GGCGGCTGCGCGGGCGGGAATTGGCGGTGCCGTGCATGCGTGCGCGGCGCCTGATGTGAATCCATCCTCTATCGGGGCCA
GGCCTGGAAGCAGGCGGGTG

Product: tRNA (guanine-N(1)-)-methyltransferase

Products: NA

Alternate protein names: M1G-methyltransferase; tRNA [GM37] methyltransferase [H]

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNQVTESAVQFDVVSLFPEMFRALTDWGITSRAVKQGRFGLRTWNPRDFTTDNYRTVDDRPYGGGPGMVMLARPLEAAID
AAKAAQAEQGIASTRVVMMSPQGAPLTHDRAVRMAQEPGVVVLCGRYEAIDQRLLDRCVDEEISLGDFVLSGGELPAMAM
MDAVVRLLPGVLNDSLSAVQDSFADGLLDCPHYTRPEEYDGVRVPDVLLGGHHAEIERWRRQEALRNTLRKRPDLIVRAR
REKLLSRADEAWLANLAREAKDAS

Sequences:

>Translated_264_residues
MNQVTESAVQFDVVSLFPEMFRALTDWGITSRAVKQGRFGLRTWNPRDFTTDNYRTVDDRPYGGGPGMVMLARPLEAAID
AAKAAQAEQGIASTRVVMMSPQGAPLTHDRAVRMAQEPGVVVLCGRYEAIDQRLLDRCVDEEISLGDFVLSGGELPAMAM
MDAVVRLLPGVLNDSLSAVQDSFADGLLDCPHYTRPEEYDGVRVPDVLLGGHHAEIERWRRQEALRNTLRKRPDLIVRAR
REKLLSRADEAWLANLAREAKDAS
>Mature_264_residues
MNQVTESAVQFDVVSLFPEMFRALTDWGITSRAVKQGRFGLRTWNPRDFTTDNYRTVDDRPYGGGPGMVMLARPLEAAID
AAKAAQAEQGIASTRVVMMSPQGAPLTHDRAVRMAQEPGVVVLCGRYEAIDQRLLDRCVDEEISLGDFVLSGGELPAMAM
MDAVVRLLPGVLNDSLSAVQDSFADGLLDCPHYTRPEEYDGVRVPDVLLGGHHAEIERWRRQEALRNTLRKRPDLIVRAR
REKLLSRADEAWLANLAREAKDAS

Specific function: Specifically methylates guanosine-37 in various tRNAs [H]

COG id: COG0336

COG function: function code J; tRNA-(guanine-N1)-methyltransferase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase trmD family [H]

Homologues:

Organism=Escherichia coli, GI1788959, Length=224, Percent_Identity=55.3571428571429, Blast_Score=254, Evalue=3e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016009
- InterPro:   IPR002649
- InterPro:   IPR023148 [H]

Pfam domain/function: PF01746 tRNA_m1G_MT [H]

EC number: =2.1.1.31 [H]

Molecular weight: Translated: 29347; Mature: 29347

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQVTESAVQFDVVSLFPEMFRALTDWGITSRAVKQGRFGLRTWNPRDFTTDNYRTVDDR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCC
PYGGGPGMVMLARPLEAAIDAAKAAQAEQGIASTRVVMMSPQGAPLTHDRAVRMAQEPGV
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCCCE
VVLCGRYEAIDQRLLDRCVDEEISLGDFVLSGGELPAMAMMDAVVRLLPGVLNDSLSAVQ
EEEECCHHHHHHHHHHHHHHCCCCCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DSFADGLLDCPHYTRPEEYDGVRVPDVLLGGHHAEIERWRRQEALRNTLRKRPDLIVRAR
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
REKLLSRADEAWLANLAREAKDAS
HHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNQVTESAVQFDVVSLFPEMFRALTDWGITSRAVKQGRFGLRTWNPRDFTTDNYRTVDDR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCC
PYGGGPGMVMLARPLEAAIDAAKAAQAEQGIASTRVVMMSPQGAPLTHDRAVRMAQEPGV
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCCCE
VVLCGRYEAIDQRLLDRCVDEEISLGDFVLSGGELPAMAMMDAVVRLLPGVLNDSLSAVQ
EEEECCHHHHHHHHHHHHHHCCCCCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DSFADGLLDCPHYTRPEEYDGVRVPDVLLGGHHAEIERWRRQEALRNTLRKRPDLIVRAR
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
REKLLSRADEAWLANLAREAKDAS
HHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA