| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065513
Identifier: 78065513
GI number: 78065513
Start: 966714
End: 967253
Strand: Reverse
Name: 78065513
Synonym: Bcep18194_A4041
Alternate gene names: NA
Gene position: 967253-966714 (Counterclockwise)
Preceding gene: 78065514
Following gene: 78065509
Centisome position: 26.18
GC content: 69.44
Gene sequence:
>540_bases ATGACCGTATCGCAACGCTACGCCGCGCTGTTCGGCGTATTCGCGCCGCTGTCGATCGCGACGATCGGCGGCGGACAGGC GATCATCGCCGACATCCAGCGGCAAGTGGTCGACGTGCATCACTGGATGACCGCCACGCAATTCGTGAACGATTTCGCGA TCGCGCGGATGGCACCGGGCCCCGGCTCGCTGCTGGCGACGCTGATCGGCTGGCAGGTGGCCGGCTTCTGGGGTGCGGTG ATCGCGACGCTCGCGCTGTTCGGCCCGACTGCTTTCCTGATCTACGGCGTCGCGCATCTGTGGCGGCGGCACCAGGGTGC ACGCTGGCAGATCGCGCTCGAGGCCGGCCTGCGCCCGGTCGCGGCCGGCATGATCCTCGCGTCGGTGTGGGTGCTGCTGC AGGCGCTCGACGGCGGCTGGGCCGCGCGCGCGATCGCGGTCGCGTCGACGCTGTGCGTGATGTATACGCGCGTTCATGCG CTGCTGCTGATCGCGATCGGCGCGCTGCTGCTGGTCGGCGTGCACACGCTCGGCATGTGA
Upstream 100 bases:
>100_bases TGCACTGGCCGCTCGTGTGGACCGTGCTGGTCGGCGGCACGCTGAGCGTCGCGCTCGAATATCGCCGCACGGCCGCGACG CCAGCCGGGAACGACACGCC
Downstream 100 bases:
>100_bases CGCGCGGCAACGCGGCGTGCGCGGGCGGCCGCGAACGACGCAGCCGATATCCGCCCAGCGGCGCGAGCGCCTCCGCACGC TGTCAGCCGCTTGTGCGCCC
Product: chromate transporter
Products: NA
Alternate protein names: Transmembrane Protein; Chromate Efflux Pump; ChrA Half Sized-Like Protein; Chromate Transporter Family; Chromate Transporter ChrA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTVSQRYAALFGVFAPLSIATIGGGQAIIADIQRQVVDVHHWMTATQFVNDFAIARMAPGPGSLLATLIGWQVAGFWGAV IATLALFGPTAFLIYGVAHLWRRHQGARWQIALEAGLRPVAAGMILASVWVLLQALDGGWAARAIAVASTLCVMYTRVHA LLLIAIGALLLVGVHTLGM
Sequences:
>Translated_179_residues MTVSQRYAALFGVFAPLSIATIGGGQAIIADIQRQVVDVHHWMTATQFVNDFAIARMAPGPGSLLATLIGWQVAGFWGAV IATLALFGPTAFLIYGVAHLWRRHQGARWQIALEAGLRPVAAGMILASVWVLLQALDGGWAARAIAVASTLCVMYTRVHA LLLIAIGALLLVGVHTLGM >Mature_178_residues TVSQRYAALFGVFAPLSIATIGGGQAIIADIQRQVVDVHHWMTATQFVNDFAIARMAPGPGSLLATLIGWQVAGFWGAVI ATLALFGPTAFLIYGVAHLWRRHQGARWQIALEAGLRPVAAGMILASVWVLLQALDGGWAARAIAVASTLCVMYTRVHAL LLIAIGALLLVGVHTLGM
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18980; Mature: 18849
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSQRYAALFGVFAPLSIATIGGGQAIIADIQRQVVDVHHWMTATQFVNDFAIARMAPG CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PGSLLATLIGWQVAGFWGAVIATLALFGPTAFLIYGVAHLWRRHQGARWQIALEAGLRPV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCHHH AAGMILASVWVLLQALDGGWAARAIAVASTLCVMYTRVHALLLIAIGALLLVGVHTLGM HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TVSQRYAALFGVFAPLSIATIGGGQAIIADIQRQVVDVHHWMTATQFVNDFAIARMAPG CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PGSLLATLIGWQVAGFWGAVIATLALFGPTAFLIYGVAHLWRRHQGARWQIALEAGLRPV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCHHH AAGMILASVWVLLQALDGGWAARAIAVASTLCVMYTRVHALLLIAIGALLLVGVHTLGM HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA