| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is pgm [H]
Identifier: 78065464
GI number: 78065464
Start: 916941
End: 918335
Strand: Direct
Name: pgm [H]
Synonym: Bcep18194_A3990
Alternate gene names: 78065464
Gene position: 916941-918335 (Clockwise)
Preceding gene: 78065458
Following gene: 78065465
Centisome position: 24.82
GC content: 66.81
Gene sequence:
>1395_bases ATGATCTCCCAATCCATCTTCAAGGCATATGACATTCGTGGTGTGGTCGGCAAGACGCTCGACACCGACACCGCGCGCGC GATCGGCCGGGCGTTCGGCAGCGAAGTGCGCGCGCAGGGCGGCGATGCGGTGGTCGTCGCGCGCGACGGCCGCCTGTCCG GGCCGGACCTCGTCGGCGCGCTGGCCGACGGCCTGCGTGCGGCGGGCGTCGACGTCGTCGACGTCGGCATGGTGCCCACG CCGGTCGGCTATTTCGCGGCGAACGTCCCGCTCGCGCTGAAGGACGGCGAGCGCCGCGTCGATTCGTGCATCGTCGTCAC GGGCAGCCACAACCCGCCCGACTACAACGGCTTCAAGATGGTGCTGCGCGGCGCCGCGATCTACGGCGAGCAGATCCAGG CGCTGTATCAGCGCATCGTCGACGAGCGTTTCGAGACGGGCAACGGCTCGTACGAACAGTTCGACGTGGCCGATCAATAC ATCGCACGCATCGTCGGCGACATCAAGCCGGCCCGCCCGATGAAGCTCGTCGTCGACGCCGGCAACGGCGTGGCCGGCCC GCTCGCGACGCGCCTGTTCAAGGCGCTCGGCTGCGAGCTGGTGGAGCGTTTCACCGACATCGACGGCACGTTCCCGAACC ATCACCCCGATCCCGCCCACCCGGAAAACCTGCAGGACGTGATCCAGGCGCTGAAGGACACCGACGCCGAGATCGGCTTC GCGTTCGACGGCGATGGCGACCGGCTCGGCGTCGTCACGAAGGATGGCCAGATCATCTATCCGGACCGCCAGCTGATGCT GTTCGCGGAAGAGGTGCTGTCGCGCAACCCGGGCGCGCAGATCATCTATGACGTGAAGTGCACGCGCCACCTCGCGCAGT GGATCAAGTCGAAGGGTGGCGAGCCGCTGATGTGGAAGACGGGCCACTCGCTCGTGAAGGCGAAGCTGCGCGAGACGGGT GCGCCGCTCGCCGGCGAAATGAGCGGCCACGTGTTCTTCAAGGATCGCTGGTACGGCTTCGACGACGGTCTCTACACGGG CGCACGCCTGCTCGAGATCCTCACGAAGACGGCCGATCCGAGCGCGCTGCTGAACGGGCTGCCGGACGCGATGAGCACGC CCGAACTGCAGCTGTGGCTCGACGAAGGCGAGAACTTCCGCCTGATCGACAAGCTGCAGAAAGAGGCGAAGTTCGACGGT GCAGAGGAAGTCGTGACGATCGACGGCCTGCGTGTCGAGTACCCGGACGGCTTCGGCCTCGCGCGTTCGTCGAACACGAC GCCGGTCGTCGTGATGCGTTTCGAGTCGGAGACGCAGGAAGGGCTCAAGCGCATCCAGGAGGACTTCCGCCGCGTGCTGA CGGCCGCGAAGCCGGACGTCAAGCTGCCGTTCTGA
Upstream 100 bases:
>100_bases CACTCCGTGCCGGGCCAGCCTGTATCATGCGCGGCACCGGCGAGCGGCGGCCAGGCAAGCCAGACAATTTTCCATGCACG CAACTGAGAGAAGAGAATCG
Downstream 100 bases:
>100_bases GTGCAGGTGGCGGCGCGGCCGCCACTGGTGCTAAACGCCCCCAGGGCTCGGTCCGAAAAGCGGCGCACGCGCATCGCGTG AGGCCGCTTTTCGCACTGTG
Product: phosphomannomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MISQSIFKAYDIRGVVGKTLDTDTARAIGRAFGSEVRAQGGDAVVVARDGRLSGPDLVGALADGLRAAGVDVVDVGMVPT PVGYFAANVPLALKDGERRVDSCIVVTGSHNPPDYNGFKMVLRGAAIYGEQIQALYQRIVDERFETGNGSYEQFDVADQY IARIVGDIKPARPMKLVVDAGNGVAGPLATRLFKALGCELVERFTDIDGTFPNHHPDPAHPENLQDVIQALKDTDAEIGF AFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTRHLAQWIKSKGGEPLMWKTGHSLVKAKLRETG APLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILTKTADPSALLNGLPDAMSTPELQLWLDEGENFRLIDKLQKEAKFDG AEEVVTIDGLRVEYPDGFGLARSSNTTPVVVMRFESETQEGLKRIQEDFRRVLTAAKPDVKLPF
Sequences:
>Translated_464_residues MISQSIFKAYDIRGVVGKTLDTDTARAIGRAFGSEVRAQGGDAVVVARDGRLSGPDLVGALADGLRAAGVDVVDVGMVPT PVGYFAANVPLALKDGERRVDSCIVVTGSHNPPDYNGFKMVLRGAAIYGEQIQALYQRIVDERFETGNGSYEQFDVADQY IARIVGDIKPARPMKLVVDAGNGVAGPLATRLFKALGCELVERFTDIDGTFPNHHPDPAHPENLQDVIQALKDTDAEIGF AFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTRHLAQWIKSKGGEPLMWKTGHSLVKAKLRETG APLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILTKTADPSALLNGLPDAMSTPELQLWLDEGENFRLIDKLQKEAKFDG AEEVVTIDGLRVEYPDGFGLARSSNTTPVVVMRFESETQEGLKRIQEDFRRVLTAAKPDVKLPF >Mature_464_residues MISQSIFKAYDIRGVVGKTLDTDTARAIGRAFGSEVRAQGGDAVVVARDGRLSGPDLVGALADGLRAAGVDVVDVGMVPT PVGYFAANVPLALKDGERRVDSCIVVTGSHNPPDYNGFKMVLRGAAIYGEQIQALYQRIVDERFETGNGSYEQFDVADQY IARIVGDIKPARPMKLVVDAGNGVAGPLATRLFKALGCELVERFTDIDGTFPNHHPDPAHPENLQDVIQALKDTDAEIGF AFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTRHLAQWIKSKGGEPLMWKTGHSLVKAKLRETG APLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILTKTADPSALLNGLPDAMSTPELQLWLDEGENFRLIDKLQKEAKFDG AEEVVTIDGLRVEYPDGFGLARSSNTTPVVVMRFESETQEGLKRIQEDFRRVLTAAKPDVKLPF
Specific function: This enzyme participates in both the breakdown and synthesis of glucose [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1788361, Length=451, Percent_Identity=36.1419068736142, Blast_Score=223, Evalue=1e-59, Organism=Escherichia coli, GI1789566, Length=477, Percent_Identity=27.4633123689727, Blast_Score=79, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 50699; Mature: 50699
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISQSIFKAYDIRGVVGKTLDTDTARAIGRAFGSEVRAQGGDAVVVARDGRLSGPDLVGA CCCHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH LADGLRAAGVDVVDVGMVPTPVGYFAANVPLALKDGERRVDSCIVVTGSHNPPDYNGFKM HHHHHHHCCCCEEECCCCCCCHHHHHCCCCEEECCCCCCCCEEEEEECCCCCCCCCHHHH VLRGAAIYGEQIQALYQRIVDERFETGNGSYEQFDVADQYIARIVGDIKPARPMKLVVDA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEC GNGVAGPLATRLFKALGCELVERFTDIDGTFPNHHPDPAHPENLQDVIQALKDTDAEIGF CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEE AFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTRHLAQWIKSKGG EECCCCCEEEEEECCCEEECCCHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCC EPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILTKTADP CCEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCH SALLNGLPDAMSTPELQLWLDEGENFRLIDKLQKEAKFDGAEEVVTIDGLRVEYPDGFGL HHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCEEEECCCCCCC ARSSNTTPVVVMRFESETQEGLKRIQEDFRRVLTAAKPDVKLPF CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MISQSIFKAYDIRGVVGKTLDTDTARAIGRAFGSEVRAQGGDAVVVARDGRLSGPDLVGA CCCHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH LADGLRAAGVDVVDVGMVPTPVGYFAANVPLALKDGERRVDSCIVVTGSHNPPDYNGFKM HHHHHHHCCCCEEECCCCCCCHHHHHCCCCEEECCCCCCCCEEEEEECCCCCCCCCHHHH VLRGAAIYGEQIQALYQRIVDERFETGNGSYEQFDVADQYIARIVGDIKPARPMKLVVDA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEC GNGVAGPLATRLFKALGCELVERFTDIDGTFPNHHPDPAHPENLQDVIQALKDTDAEIGF CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEE AFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTRHLAQWIKSKGG EECCCCCEEEEEECCCEEECCCHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCC EPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILTKTADP CCEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCH SALLNGLPDAMSTPELQLWLDEGENFRLIDKLQKEAKFDGAEEVVTIDGLRVEYPDGFGL HHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCEEEECCCCCCC ARSSNTTPVVVMRFESETQEGLKRIQEDFRRVLTAAKPDVKLPF CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8157643; 8188595 [H]