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The map label for this gene is rfbA [H]

Identifier: 78065454

GI number: 78065454

Start: 904847

End: 905743

Strand: Reverse

Name: rfbA [H]

Synonym: Bcep18194_A3980

Alternate gene names: 78065454

Gene position: 905743-904847 (Counterclockwise)

Preceding gene: 78065459

Following gene: 78065453

Centisome position: 24.52

GC content: 58.42

Gene sequence:

>897_bases
ATGGCTGCGCCACGTGGGCGAGGGGTTGGGGGCTCCATCACCGATCCGAATGCAACGACACGCAACTTGATGAATCCGAA
CTCGAAGCACCCGGCATCGCCGATGGCGATCGCCCGTAGCATTTACCGTAATCGCGGACTGATTCTGCAAATGACTCAAC
GCGAGGTCGTCGGGCGCTATCGCGGGTCGGCAATGGGTCTTGCGTGGTCGTTCTTCAATCCCGTGCTGATGCTCGTCGTC
TACACCTTCTTCTTCTCCGTCATCTTCAAGTCGCGATGGGGTACCACGAGCGACGACAAGGCAAGCTTCGCGATCGTCCT
GTTCGTCGGCCTGATCCTCCATAGCCTGCTGGCAGAGTGCATCAACCGGGCACCGACGTTGATCCTTGCAAACGTCAACT
ACGTCAAGAAGGTTATTTTCCCGCTCGAGATACTGCCGGTGGTCGCGCTCGCGTCAGCGCTGTTCCACAGCGCGATCAGC
CTGCTGGTCCTGATCATCGCCGAGTGCATCCTTATCCACTCGCTGCCCTGGACCGCCATCCTGTTCCCCGTCGTCATGCT
GCCGCTGATCATCGGCTCACTGGGGCTCGCATGGTTTCTGTCGGCTTTGGGCGTCTACATTCGAGACATTGCGCAGATTA
CCGGTGTCATCACGTCAGTGCTGATGTTCCTGTCGCCGGTTTTCTACCCTGTGTCGAATCTGCCGCCACAGTATCGGTCC
TGGATCGAACTCAACCCCCTTACGTTCATCATCGAAGAGGGACGCAACACGCTGATCTTCGGGCACCCCCCCGACTGGAC
GAACTGGCTAACCTGCATGATCGCATCGCTGCTTCTCGCGTGGTTCGGATTCTGGTGGTTCCAGCGGACCCGAAAGGGAT
TCGCAGACGTCCTGTAA

Upstream 100 bases:

>100_bases
CCTTATTTGCCCGATCGCTCAGGATTGAAGTCGGGAGCACATTGAAACGTCGCGGCCAACTGGATTGCCGCCTTTTTCAG
ACTCACGACACCCCGCAACA

Downstream 100 bases:

>100_bases
TCCATGCCAGCGCGCTCGCCTGCCGCCTTGCATCAGTGGCAGTTGCCGTGCACGCGGATAGATCGCCGACCGATCGGATC
ATGACGCGATAGAGCAATCA

Product: ABC polysaccharide/polyol phosphate export pump, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MAAPRGRGVGGSITDPNATTRNLMNPNSKHPASPMAIARSIYRNRGLILQMTQREVVGRYRGSAMGLAWSFFNPVLMLVV
YTFFFSVIFKSRWGTTSDDKASFAIVLFVGLILHSLLAECINRAPTLILANVNYVKKVIFPLEILPVVALASALFHSAIS
LLVLIIAECILIHSLPWTAILFPVVMLPLIIGSLGLAWFLSALGVYIRDIAQITGVITSVLMFLSPVFYPVSNLPPQYRS
WIELNPLTFIIEEGRNTLIFGHPPDWTNWLTCMIASLLLAWFGFWWFQRTRKGFADVL

Sequences:

>Translated_298_residues
MAAPRGRGVGGSITDPNATTRNLMNPNSKHPASPMAIARSIYRNRGLILQMTQREVVGRYRGSAMGLAWSFFNPVLMLVV
YTFFFSVIFKSRWGTTSDDKASFAIVLFVGLILHSLLAECINRAPTLILANVNYVKKVIFPLEILPVVALASALFHSAIS
LLVLIIAECILIHSLPWTAILFPVVMLPLIIGSLGLAWFLSALGVYIRDIAQITGVITSVLMFLSPVFYPVSNLPPQYRS
WIELNPLTFIIEEGRNTLIFGHPPDWTNWLTCMIASLLLAWFGFWWFQRTRKGFADVL
>Mature_297_residues
AAPRGRGVGGSITDPNATTRNLMNPNSKHPASPMAIARSIYRNRGLILQMTQREVVGRYRGSAMGLAWSFFNPVLMLVVY
TFFFSVIFKSRWGTTSDDKASFAIVLFVGLILHSLLAECINRAPTLILANVNYVKKVIFPLEILPVVALASALFHSAISL
LVLIIAECILIHSLPWTAILFPVVMLPLIIGSLGLAWFLSALGVYIRDIAQITGVITSVLMFLSPVFYPVSNLPPQYRSW
IELNPLTFIIEEGRNTLIFGHPPDWTNWLTCMIASLLLAWFGFWWFQRTRKGFADVL

Specific function: May form an ATP-driven O-antigen export apparatus, in association with rfbB [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 33286; Mature: 33155

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPRGRGVGGSITDPNATTRNLMNPNSKHPASPMAIARSIYRNRGLILQMTQREVVGRY
CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHH
RGSAMGLAWSFFNPVLMLVVYTFFFSVIFKSRWGTTSDDKASFAIVLFVGLILHSLLAEC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
INRAPTLILANVNYVKKVIFPLEILPVVALASALFHSAISLLVLIIAECILIHSLPWTAI
HCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LFPVVMLPLIIGSLGLAWFLSALGVYIRDIAQITGVITSVLMFLSPVFYPVSNLPPQYRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
WIELNPLTFIIEEGRNTLIFGHPPDWTNWLTCMIASLLLAWFGFWWFQRTRKGFADVL
HEECCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AAPRGRGVGGSITDPNATTRNLMNPNSKHPASPMAIARSIYRNRGLILQMTQREVVGRY
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHH
RGSAMGLAWSFFNPVLMLVVYTFFFSVIFKSRWGTTSDDKASFAIVLFVGLILHSLLAEC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
INRAPTLILANVNYVKKVIFPLEILPVVALASALFHSAISLLVLIIAECILIHSLPWTAI
HCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LFPVVMLPLIIGSLGLAWFLSALGVYIRDIAQITGVITSVLMFLSPVFYPVSNLPPQYRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
WIELNPLTFIIEEGRNTLIFGHPPDWTNWLTCMIASLLLAWFGFWWFQRTRKGFADVL
HEECCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8626291 [H]