| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is apaH
Identifier: 78065442
GI number: 78065442
Start: 889267
End: 890106
Strand: Reverse
Name: apaH
Synonym: Bcep18194_A3968
Alternate gene names: 78065442
Gene position: 890106-889267 (Counterclockwise)
Preceding gene: 78065447
Following gene: 78065433
Centisome position: 24.1
GC content: 70.48
Gene sequence:
>840_bases ATGACCCGCACCCCCATCGCAATCGGCGACATCCAGGGCTGTCATTCCGCTCTCCAGTCGCTGCTCGACAAGCTGTCCCC GCCCGCCGACACGCCGCTGTGGATCGCCGGCGACGTCGTCAACCGCGGCCCGGACTCCCTCGCCGCGCTGCGTGCGCTCG TCGACCTCGGCCCGCGCGCGACCGTCGTGCTCGGCAATCACGACCTGCACCTGCTCGCGGTCTCCGCCGGCCTGCGCACC GAGCGCCCGGGCGACACCATCGGCGAGATCCTCGATGCACCCGACGCCGATGCGCTGCTCGACTGGGTCCGCCACCGGCC GTTTGTCCATGCGGAGAACGGGATGCTGCTGGTGCATGCGGGCGTGCTGCCGCAGTGGGATGCGACGCTCGTGCTGGAGC TCGCCGACGAACTCCAGCGCGCGTTGCGCGCGCCCGACTGGCGCGACACGCTGCAGAAGCTGTACGGCAACGAGCCGAAT CAATGGAGCCCGGATCTGAAGAAACGCGACCGGATGCGCGTCGCGTTCAACGCATTCACGCGTGTGCGCTTCTGCACGCC CGACGGTGCGATGGAATTCAAGGCGAACGGCGGCCCCGACAGCGCGCCGCCCGGCTACCTGCCGTGGTTCGACGTACCGG GGCGCCGCACGGAGGACGTGACGGTCGTGTTCGGCCACTGGGCCGCGCTCGGCCTGATGGTGCGCGAGAACGTGGTCGCG CTCGATTCGGGATGTGTGTGGGGGAACCAGTTGTCGGCCGTGCGGCTGACGGCCGATCCGGCGCAGCGCACGGTCACGCA GGTGCAGTGCGACGCGTGCCGCGCGCCGGGAGGAGAGTGA
Upstream 100 bases:
>100_bases CAAATCAATACGTTAAAATTCCCCGAATACGCTCGCAGTTGCGTTGCAGCGATCGCATCCTTTTTCGACCCGCGTCAGGA TTTGTAACAACCTACCTCTC
Downstream 100 bases:
>100_bases TTAAGCGCTGATTCGCGGGGCCGGGAAGCGCGTCAACCCTCGCGCCCCGGCACGGGCGCATCGGCCGCCTCGCCGCCTGC CGCTCCGGCGCCAACCTCGG
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase [H]
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTRTPIAIGDIQGCHSALQSLLDKLSPPADTPLWIAGDVVNRGPDSLAALRALVDLGPRATVVLGNHDLHLLAVSAGLRT ERPGDTIGEILDAPDADALLDWVRHRPFVHAENGMLLVHAGVLPQWDATLVLELADELQRALRAPDWRDTLQKLYGNEPN QWSPDLKKRDRMRVAFNAFTRVRFCTPDGAMEFKANGGPDSAPPGYLPWFDVPGRRTEDVTVVFGHWAALGLMVRENVVA LDSGCVWGNQLSAVRLTADPAQRTVTQVQCDACRAPGGE
Sequences:
>Translated_279_residues MTRTPIAIGDIQGCHSALQSLLDKLSPPADTPLWIAGDVVNRGPDSLAALRALVDLGPRATVVLGNHDLHLLAVSAGLRT ERPGDTIGEILDAPDADALLDWVRHRPFVHAENGMLLVHAGVLPQWDATLVLELADELQRALRAPDWRDTLQKLYGNEPN QWSPDLKKRDRMRVAFNAFTRVRFCTPDGAMEFKANGGPDSAPPGYLPWFDVPGRRTEDVTVVFGHWAALGLMVRENVVA LDSGCVWGNQLSAVRLTADPAQRTVTQVQCDACRAPGGE >Mature_278_residues TRTPIAIGDIQGCHSALQSLLDKLSPPADTPLWIAGDVVNRGPDSLAALRALVDLGPRATVVLGNHDLHLLAVSAGLRTE RPGDTIGEILDAPDADALLDWVRHRPFVHAENGMLLVHAGVLPQWDATLVLELADELQRALRAPDWRDTLQKLYGNEPNQ WSPDLKKRDRMRVAFNAFTRVRFCTPDGAMEFKANGGPDSAPPGYLPWFDVPGRRTEDVTVVFGHWAALGLMVRENVVAL DSGCVWGNQLSAVRLTADPAQRTVTQVQCDACRAPGGE
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786234, Length=253, Percent_Identity=43.8735177865613, Blast_Score=223, Evalue=2e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004617 - InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.6.1.41 [H]
Molecular weight: Translated: 30382; Mature: 30251
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTPIAIGDIQGCHSALQSLLDKLSPPADTPLWIAGDVVNRGPDSLAALRALVDLGPRA CCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHCCCCHHHHHHHHHHHCCCCE TVVLGNHDLHLLAVSAGLRTERPGDTIGEILDAPDADALLDWVRHRPFVHAENGMLLVHA EEEECCCCEEEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCEEECCCEEEEEE GVLPQWDATLVLELADELQRALRAPDWRDTLQKLYGNEPNQWSPDLKKRDRMRVAFNAFT CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEHHE RVRFCTPDGAMEFKANGGPDSAPPGYLPWFDVPGRRTEDVTVVFGHWAALGLMVRENVVA EEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCEEE LDSGCVWGNQLSAVRLTADPAQRTVTQVQCDACRAPGGE EECCCEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TRTPIAIGDIQGCHSALQSLLDKLSPPADTPLWIAGDVVNRGPDSLAALRALVDLGPRA CCCCEEECCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHCCCCHHHHHHHHHHHCCCCE TVVLGNHDLHLLAVSAGLRTERPGDTIGEILDAPDADALLDWVRHRPFVHAENGMLLVHA EEEECCCCEEEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCEEECCCEEEEEE GVLPQWDATLVLELADELQRALRAPDWRDTLQKLYGNEPNQWSPDLKKRDRMRVAFNAFT CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEHHE RVRFCTPDGAMEFKANGGPDSAPPGYLPWFDVPGRRTEDVTVVFGHWAALGLMVRENVVA EEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCEEE LDSGCVWGNQLSAVRLTADPAQRTVTQVQCDACRAPGGE EECCCEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA