| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is pyrR [H]
Identifier: 78065438
GI number: 78065438
Start: 885410
End: 885922
Strand: Direct
Name: pyrR [H]
Synonym: Bcep18194_A3964
Alternate gene names: 78065438
Gene position: 885410-885922 (Clockwise)
Preceding gene: 78065437
Following gene: 78065439
Centisome position: 23.97
GC content: 72.9
Gene sequence:
>513_bases ATGAGCACCATTGACGCCGAGGCGCTTTACCGCGTCCTGCTCGACCAGATCCGTGCCGCGTACGGCACGGCTTTCGCCGA ACCGGGCGGCCCGCGGCTCGCCGGCATCCACAGCGGCGGCGCATGGCTTGCCGAGCGCCTCGCACGCGATCTCGGCGCGC CGGCGTTCGGCGTCGTGAACGTTGCGCTGCATCGCGACGATTACGCGAAGAAGGGGCTGCACAGCCAGGCCAGCCCGACG TCGCTGCCGTTCGAGATCGACGGCGCGCGCATCGTGCTCGTCGACGACGTGCTGTATACCGGGCGCACCGTGCGCGCGGC GCTCAACGAGCTGTTCGACTACGGCCGTCCGGCCGCGGTCGAGCTCGCGGTGCTCGCCGATCGCGGCGGCCGCGAGCTGC CGGTCGCCGCGCGTTTCGCCGGCGGCGCGCTCGACGTGCCGGCCGACGCGACGCTCGTGCTCGCACGCGACGATGCGCAG TTCACGCTGCGCGTCGAGGCGCACGGCGCCTGA
Upstream 100 bases:
>100_bases CTGCGCGAGCGCAACGTGCGCGGCCGCGCCCGGGCCGAGATGCTCGATGCCGAGGCCGCGCGCGTCATCCTTCAACAGTA TCTCGATCAATTGTCCGACC
Downstream 100 bases:
>100_bases ACGACACGCGAACCGTATCCCGGGCCGCTGGTTTGCACCGCGGCCCGTTTGCATAGTTGGAATCACGCACACCATGACCA CCGACACCACTGGCCGCACC
Product: bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase
Products: NA
Alternate protein names: Pyrimidine operon regulatory protein; Uracil phosphoribosyltransferase; UPRTase [H]
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSTIDAEALYRVLLDQIRAAYGTAFAEPGGPRLAGIHSGGAWLAERLARDLGAPAFGVVNVALHRDDYAKKGLHSQASPT SLPFEIDGARIVLVDDVLYTGRTVRAALNELFDYGRPAAVELAVLADRGGRELPVAARFAGGALDVPADATLVLARDDAQ FTLRVEAHGA
Sequences:
>Translated_170_residues MSTIDAEALYRVLLDQIRAAYGTAFAEPGGPRLAGIHSGGAWLAERLARDLGAPAFGVVNVALHRDDYAKKGLHSQASPT SLPFEIDGARIVLVDDVLYTGRTVRAALNELFDYGRPAAVELAVLADRGGRELPVAARFAGGALDVPADATLVLARDDAQ FTLRVEAHGA >Mature_169_residues STIDAEALYRVLLDQIRAAYGTAFAEPGGPRLAGIHSGGAWLAERLARDLGAPAFGVVNVALHRDDYAKKGLHSQASPTS LPFEIDGARIVLVDDVLYTGRTVRAALNELFDYGRPAAVELAVLADRGGRELPVAARFAGGALDVPADATLVLARDDAQF TLRVEAHGA
Specific function: Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant [H]
COG id: COG2065
COG function: function code F; Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 - InterPro: IPR023050 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.9 [H]
Molecular weight: Translated: 17933; Mature: 17802
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIDAEALYRVLLDQIRAAYGTAFAEPGGPRLAGIHSGGAWLAERLARDLGAPAFGVVN CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHEEE VALHRDDYAKKGLHSQASPTSLPFEIDGARIVLVDDVLYTGRTVRAALNELFDYGRPAAV EEEECCHHHHHCCCCCCCCCCCCEEECCCEEEEEECCHHCCHHHHHHHHHHHHCCCCCCE ELAVLADRGGRELPVAARFAGGALDVPADATLVLARDDAQFTLRVEAHGA EEEEEECCCCCCCCEEEEECCCCEECCCCCEEEEEECCCEEEEEEEECCC >Mature Secondary Structure STIDAEALYRVLLDQIRAAYGTAFAEPGGPRLAGIHSGGAWLAERLARDLGAPAFGVVN CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHEEE VALHRDDYAKKGLHSQASPTSLPFEIDGARIVLVDDVLYTGRTVRAALNELFDYGRPAAV EEEECCHHHHHCCCCCCCCCCCCEEECCCEEEEEECCHHCCHHHHHHHHHHHHCCCCCCE ELAVLADRGGRELPVAARFAGGALDVPADATLVLARDDAQFTLRVEAHGA EEEEEECCCCCCCCEEEEECCCCEECCCCCEEEEEECCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]