Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is 78065426
Identifier: 78065426
GI number: 78065426
Start: 874096
End: 875229
Strand: Reverse
Name: 78065426
Synonym: Bcep18194_A3952
Alternate gene names: NA
Gene position: 875229-874096 (Counterclockwise)
Preceding gene: 78065427
Following gene: 78065425
Centisome position: 23.69
GC content: 68.61
Gene sequence:
>1134_bases ATGAATCCATCCGCTCCGCTTCGCCGCCTCGCGACGGGCGCACTGGCCGCCGCCGCACTGACGGCCGCCGCCGGCGCACT CGCCGAGCCGCAAGGTTTCCTCGAGACCGTGCATCGCCACGTCACGCTCGTCAACACGGTGCCGGACAACGGCGACCAGA ATCCGTACGCGATCGCGGTCGCGCCGGTGTCGGCCGGCACGATCCAGGCGGGCGACGTGCTCGTCGACAACTTCAACAAC TCGGCGAACCTGCAAGGCACCGGCAGCACGATCGTCAACTACCGCCCGTCGACGAAGCAGATGAGCCTGTTCGCGTCGAT TCCGCGCGACCTGAAGGCGTGCCCGGGCGGCGTCGGCCTGTCGACGGCGATGACGATGCTGAAGTCGGGCTGGGTGATCG TCGGCAGCACGCCGAGCAACGACGGCACGACCAACACCAAGGGCGCCGGCTGCATGATCGTGCTCGATCCGCAGGGCAAG ATCGCGTCGACGTGGTCGACCCCGAACATCAACGACCCGTGGGGCAACATGGCCGTGGTCGACCGCGGCGACAGCGCGAC GCTGTTCGTCAGCATGGCCGGCTTCGGCGTCGGCGGCGCGGACGGCAATCCGCCCGTCTACAAGCAGGCGACCGTGCTGC GTCTCGACCTCGACGTGCCGGCCGGCAAGCCGCCCGTGATCAAGCAGGAAACGGTCGTCGCGAGCGGCCTCGGCGCGCAG GCCGACAAAGGCGTGTTCCTGGTCGGCCCGACCGGCCTCGCGCTGTCCGGCGACCAGAAGAAACTGTATGTGTCGGACGC GATCGGCAACCGCATCGTCGAGATCGACGACCCGCTCACGCGCGACACCAGCGCGGGCGTCGGCCGCCAGATCACCGCCG ACGGCTTCCTGCGCCGCCCGCTCGCGCTCGCCACCGCGCCGAACGGCCACCTGCTCACGACCAACGGGCAGAACGGCCAG GTCGTCGAGATCGACCCGGTCGCCGGCAAGCAAATCTACGCGCGCTGGATCAATACCGACAAGGCGCAGTCGCCCCCCGG CAACGGCAACCTGTTCGGCATCGCAATGACGCCTGAAGGCGACGGCTTCTACTACGTCGCGGACGACGTCAACACGCTGT TGCTCGCGAAGTAA
Upstream 100 bases:
>100_bases TCGTGATCGGTGCACGTACGACGATCACGTTCTGAGCGGACGCGCCCACGCTGACCCTTTTCGCGCGCCGCCCGGACGGC GCGCTCCCCAGGAGACCCAC
Downstream 100 bases:
>100_bases GGGAGCCGATCATGGCAGACGATTCCAACCAGCCACCCCGCCCGACGCGGCGCGGCTTCCTGAAGGCGGGCGGCGCCGCG GTGGCCGCCGGCCTCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MNPSAPLRRLATGALAAAALTAAAGALAEPQGFLETVHRHVTLVNTVPDNGDQNPYAIAVAPVSAGTIQAGDVLVDNFNN SANLQGTGSTIVNYRPSTKQMSLFASIPRDLKACPGGVGLSTAMTMLKSGWVIVGSTPSNDGTTNTKGAGCMIVLDPQGK IASTWSTPNINDPWGNMAVVDRGDSATLFVSMAGFGVGGADGNPPVYKQATVLRLDLDVPAGKPPVIKQETVVASGLGAQ ADKGVFLVGPTGLALSGDQKKLYVSDAIGNRIVEIDDPLTRDTSAGVGRQITADGFLRRPLALATAPNGHLLTTNGQNGQ VVEIDPVAGKQIYARWINTDKAQSPPGNGNLFGIAMTPEGDGFYYVADDVNTLLLAK
Sequences:
>Translated_377_residues MNPSAPLRRLATGALAAAALTAAAGALAEPQGFLETVHRHVTLVNTVPDNGDQNPYAIAVAPVSAGTIQAGDVLVDNFNN SANLQGTGSTIVNYRPSTKQMSLFASIPRDLKACPGGVGLSTAMTMLKSGWVIVGSTPSNDGTTNTKGAGCMIVLDPQGK IASTWSTPNINDPWGNMAVVDRGDSATLFVSMAGFGVGGADGNPPVYKQATVLRLDLDVPAGKPPVIKQETVVASGLGAQ ADKGVFLVGPTGLALSGDQKKLYVSDAIGNRIVEIDDPLTRDTSAGVGRQITADGFLRRPLALATAPNGHLLTTNGQNGQ VVEIDPVAGKQIYARWINTDKAQSPPGNGNLFGIAMTPEGDGFYYVADDVNTLLLAK >Mature_377_residues MNPSAPLRRLATGALAAAALTAAAGALAEPQGFLETVHRHVTLVNTVPDNGDQNPYAIAVAPVSAGTIQAGDVLVDNFNN SANLQGTGSTIVNYRPSTKQMSLFASIPRDLKACPGGVGLSTAMTMLKSGWVIVGSTPSNDGTTNTKGAGCMIVLDPQGK IASTWSTPNINDPWGNMAVVDRGDSATLFVSMAGFGVGGADGNPPVYKQATVLRLDLDVPAGKPPVIKQETVVASGLGAQ ADKGVFLVGPTGLALSGDQKKLYVSDAIGNRIVEIDDPLTRDTSAGVGRQITADGFLRRPLALATAPNGHLLTTNGQNGQ VVEIDPVAGKQIYARWINTDKAQSPPGNGNLFGIAMTPEGDGFYYVADDVNTLLLAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38858; Mature: 38858
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSAPLRRLATGALAAAALTAAAGALAEPQGFLETVHRHVTLVNTVPDNGDQNPYAIAV CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEEECCCCCCCCCEEEEE APVSAGTIQAGDVLVDNFNNSANLQGTGSTIVNYRPSTKQMSLFASIPRDLKACPGGVGL EECCCCEEEECCEEEECCCCCCCEEECCCEEEEECCCCHHHHHHHHCCHHHHHCCCCCCH STAMTMLKSGWVIVGSTPSNDGTTNTKGAGCMIVLDPQGKIASTWSTPNINDPWGNMAVV HHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEE DRGDSATLFVSMAGFGVGGADGNPPVYKQATVLRLDLDVPAGKPPVIKQETVVASGLGAQ ECCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEECCEEEECCCCCC ADKGVFLVGPTGLALSGDQKKLYVSDAIGNRIVEIDDPLTRDTSAGVGRQITADGFLRRP CCCCEEEECCCCEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEECCCHHCCC LALATAPNGHLLTTNGQNGQVVEIDPVAGKQIYARWINTDKAQSPPGNGNLFGIAMTPEG EEEEECCCCCEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCC DGFYYVADDVNTLLLAK CCEEEEECCCCEEEEEC >Mature Secondary Structure MNPSAPLRRLATGALAAAALTAAAGALAEPQGFLETVHRHVTLVNTVPDNGDQNPYAIAV CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEEECCCCCCCCCEEEEE APVSAGTIQAGDVLVDNFNNSANLQGTGSTIVNYRPSTKQMSLFASIPRDLKACPGGVGL EECCCCEEEECCEEEECCCCCCCEEECCCEEEEECCCCHHHHHHHHCCHHHHHCCCCCCH STAMTMLKSGWVIVGSTPSNDGTTNTKGAGCMIVLDPQGKIASTWSTPNINDPWGNMAVV HHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEE DRGDSATLFVSMAGFGVGGADGNPPVYKQATVLRLDLDVPAGKPPVIKQETVVASGLGAQ ECCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEECCEEEECCCCCC ADKGVFLVGPTGLALSGDQKKLYVSDAIGNRIVEIDDPLTRDTSAGVGRQITADGFLRRP CCCCEEEECCCCEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEECCCHHCCC LALATAPNGHLLTTNGQNGQVVEIDPVAGKQIYARWINTDKAQSPPGNGNLFGIAMTPEG EEEEECCCCCEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCC DGFYYVADDVNTLLLAK CCEEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA