| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is hemH
Identifier: 78065309
GI number: 78065309
Start: 741495
End: 742559
Strand: Direct
Name: hemH
Synonym: Bcep18194_A3835
Alternate gene names: 78065309
Gene position: 741495-742559 (Clockwise)
Preceding gene: 78065306
Following gene: 78065310
Centisome position: 20.07
GC content: 68.64
Gene sequence:
>1065_bases ATGCGTTTCGATCTTGAGCCGCCTTCGAGCACCGCGGCTGCCCATCGCATCGGTGTGCTGCTGATCAATCTCGGCACGCC CGACGCCCCTACGCCGCGCGCGGTGCGGCGCTACCTGGCCGAATTCCTGTCGGATCCGCGGGTCGTCGAGATTCCGCAGG CCGTCTGGCAGGTGCTGCTGCGCACGCTGATCCTGCCGCTGCGCGGCCGCGCGTCCGCAAAGAAATACGCAGCCGTCTGG ATGCCCGAGGGCTCGCCGCTGCGTGTGTACACGGAGCGCCAGACGGACAGCGTGCGGCATCTGCTCACGTCGAACGGCTA TCACGTGATGGTCGATTACGCGATGCGCTACGGCAGCCCGAACATTTCGCACGCGCTCGCGCAGTTCAAGCGTGCGGGCG TCGAGCGCGTGCTGCTGATGCCGATGTATCCGCAATACTCGGCGTCGACCACGGCCACCGCCTTCGACGCCGCTTTCGAC GCGCTCGCGCGCATGCGCAACCAGCCCGAGGTACGCACGGTGCGGCACTACGCCGACCATCCGGCCTATATCCATGCGCT GGCCGAGCAGGTGCGCCAGTATTGGGCGCAGCACGGCCGGCCCGATTTCGCGGCCGGCGACAAGCTCGTGCTGAGCTTTC ACGGCGTGCCGAAGCGCACGCTCGACCTCGGCGACCCCTATCACGACCAGTGCCAGCAGACGGGTGCGCTGCTGACGGCC GCGCTCGGGCTGTCGACGACCGAGTGCCGCGTCACGTTCCAGTCGCGTTTCGGCAAGGCCGAATGGCTGCAGCCTTACAC CGCGCCGACGCTGCGCGAGTTCGGCGAGGCCGGCGTGCGGCGCGCCGACGTGTTCTGTCCCGGTTTCACGGCCGACTGCC TGGAGACGATCGAGGAGATCGGCATGGAAGTGCGCGACGAGTTCCTCGCCGGCGGCGGCAAGGCGTTCCACCGCATTCCG TGCCTGAACGGTGCGCCCGCGTGGATCGGCGCGCTCGGCGAGATCGTCGCCGAGAATCTGCAGGGCTGGCCGGTCAGGGC CGCGCAGCCCGAAACGGTGAGCTGA
Upstream 100 bases:
>100_bases GCGTAAGCAGGCAGTCGGCCGAACGGCCAGCCGACCGGTGCGGGGCGGCCCGCTATAATTGAGAGCCGTCCGGTCCCGTG CCCCGAGCACGTAATTGCCC
Downstream 100 bases:
>100_bases GATGAAACGACCCCCACGCTCACTTCGTTCACTGCCCCCCGAGGGGGCGGTCAGCCTCCTTGGGGCGGCCCGGCGGAGGC TGCGATGAATTACAAGATTT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MRFDLEPPSSTAAAHRIGVLLINLGTPDAPTPRAVRRYLAEFLSDPRVVEIPQAVWQVLLRTLILPLRGRASAKKYAAVW MPEGSPLRVYTERQTDSVRHLLTSNGYHVMVDYAMRYGSPNISHALAQFKRAGVERVLLMPMYPQYSASTTATAFDAAFD ALARMRNQPEVRTVRHYADHPAYIHALAEQVRQYWAQHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTGALLTA ALGLSTTECRVTFQSRFGKAEWLQPYTAPTLREFGEAGVRRADVFCPGFTADCLETIEEIGMEVRDEFLAGGGKAFHRIP CLNGAPAWIGALGEIVAENLQGWPVRAAQPETVS
Sequences:
>Translated_354_residues MRFDLEPPSSTAAAHRIGVLLINLGTPDAPTPRAVRRYLAEFLSDPRVVEIPQAVWQVLLRTLILPLRGRASAKKYAAVW MPEGSPLRVYTERQTDSVRHLLTSNGYHVMVDYAMRYGSPNISHALAQFKRAGVERVLLMPMYPQYSASTTATAFDAAFD ALARMRNQPEVRTVRHYADHPAYIHALAEQVRQYWAQHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTGALLTA ALGLSTTECRVTFQSRFGKAEWLQPYTAPTLREFGEAGVRRADVFCPGFTADCLETIEEIGMEVRDEFLAGGGKAFHRIP CLNGAPAWIGALGEIVAENLQGWPVRAAQPETVS >Mature_354_residues MRFDLEPPSSTAAAHRIGVLLINLGTPDAPTPRAVRRYLAEFLSDPRVVEIPQAVWQVLLRTLILPLRGRASAKKYAAVW MPEGSPLRVYTERQTDSVRHLLTSNGYHVMVDYAMRYGSPNISHALAQFKRAGVERVLLMPMYPQYSASTTATAFDAAFD ALARMRNQPEVRTVRHYADHPAYIHALAEQVRQYWAQHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTGALLTA ALGLSTTECRVTFQSRFGKAEWLQPYTAPTLREFGEAGVRRADVFCPGFTADCLETIEEIGMEVRDEFLAGGGKAFHRIP CLNGAPAWIGALGEIVAENLQGWPVRAAQPETVS
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=270, Percent_Identity=25.5555555555556, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI60499021, Length=270, Percent_Identity=25.5555555555556, Blast_Score=96, Evalue=4e-20, Organism=Escherichia coli, GI1786681, Length=322, Percent_Identity=46.2732919254658, Blast_Score=283, Evalue=1e-77, Organism=Saccharomyces cerevisiae, GI6324750, Length=342, Percent_Identity=24.2690058479532, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI17864156, Length=341, Percent_Identity=24.9266862170088, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24651774, Length=270, Percent_Identity=24.8148148148148, Blast_Score=76, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 39286; Mature: 39286
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFDLEPPSSTAAAHRIGVLLINLGTPDAPTPRAVRRYLAEFLSDPRVVEIPQAVWQVLL CCCCCCCCCCHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHH RTLILPLRGRASAKKYAAVWMPEGSPLRVYTERQTDSVRHLLTSNGYHVMVDYAMRYGSP HHHHHHCCCCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEHHHHCCCC NISHALAQFKRAGVERVLLMPMYPQYSASTTATAFDAAFDALARMRNQPEVRTVRHYADH CHHHHHHHHHHHCHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PAYIHALAEQVRQYWAQHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTGALLTA HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH ALGLSTTECRVTFQSRFGKAEWLQPYTAPTLREFGEAGVRRADVFCPGFTADCLETIEEI HHCCCCHHHEEEHHHHCCCHHHCCCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHH GMEVRDEFLAGGGKAFHRIPCLNGAPAWIGALGEIVAENLQGWPVRAAQPETVS HHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRFDLEPPSSTAAAHRIGVLLINLGTPDAPTPRAVRRYLAEFLSDPRVVEIPQAVWQVLL CCCCCCCCCCHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHH RTLILPLRGRASAKKYAAVWMPEGSPLRVYTERQTDSVRHLLTSNGYHVMVDYAMRYGSP HHHHHHCCCCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEHHHHCCCC NISHALAQFKRAGVERVLLMPMYPQYSASTTATAFDAAFDALARMRNQPEVRTVRHYADH CHHHHHHHHHHHCHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PAYIHALAEQVRQYWAQHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTGALLTA HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH ALGLSTTECRVTFQSRFGKAEWLQPYTAPTLREFGEAGVRRADVFCPGFTADCLETIEEI HHCCCCHHHEEEHHHHCCCHHHCCCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHH GMEVRDEFLAGGGKAFHRIPCLNGAPAWIGALGEIVAENLQGWPVRAAQPETVS HHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA