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The map label for this gene is 78065220

Identifier: 78065220

GI number: 78065220

Start: 635078

End: 635500

Strand: Direct

Name: 78065220

Synonym: Bcep18194_A3744

Alternate gene names: NA

Gene position: 635078-635500 (Clockwise)

Preceding gene: 161702966

Following gene: 78065222

Centisome position: 17.19

GC content: 63.12

Gene sequence:

>423_bases
ATGGCGATGCTCTGGGTCAAGACGTTCCATATCGTTCTGATCGCCGCGTGGTTTGCGGGGTTGTTCTACCTGCCGCGCAT
CTACGTGAACCTGGCCATGGAAACCGATCCGGCCGCGGTGCGACGCCTGCTGTTGATGGCACGCAAGCTGTTCCGTTTCA
TGACGATGATCGCGGTGCCGGCGCTGGCCTGCGGGCTCTGGCTCTGGCTGTCGATCGGCATCGGGCAGGGGCAGGGCTGG
ATTCACGCGAAAGTGACGGTCGTGCTGCTGCTCATCGTCTATCACGCGTATTGCGGGCACCTGCTGCGGGTGTTCGAGCG
CGGCGAGAACCGCCGCACCGACAAGTGGTATCGCGTGTTCAACGAACTGCCGGTGCTCGGCATGCTCGCGGCGGTTGCGC
TGGTCGTGATCAAGCCGTTCTGA

Upstream 100 bases:

>100_bases
CACGCACGCGGCCCCGTCGGCCTGGAAGGGCTGACGTCGCTGAAGTACGTCGTGCTCGGACACGGCGAAGGCCGCCAGTA
AATAGCGAGGCACACAATCG

Downstream 100 bases:

>100_bases
GCGGCAAGGCCTGCGAGGTTGCAGGCGTCGCCTGATGCAAAACGGCGCCCCGCGGGGCGCCGTTTGTCGTTTACGCGCGC
TCGACGTGGTCGGCGCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MAMLWVKTFHIVLIAAWFAGLFYLPRIYVNLAMETDPAAVRRLLLMARKLFRFMTMIAVPALACGLWLWLSIGIGQGQGW
IHAKVTVVLLLIVYHAYCGHLLRVFERGENRRTDKWYRVFNELPVLGMLAAVALVVIKPF

Sequences:

>Translated_140_residues
MAMLWVKTFHIVLIAAWFAGLFYLPRIYVNLAMETDPAAVRRLLLMARKLFRFMTMIAVPALACGLWLWLSIGIGQGQGW
IHAKVTVVLLLIVYHAYCGHLLRVFERGENRRTDKWYRVFNELPVLGMLAAVALVVIKPF
>Mature_139_residues
AMLWVKTFHIVLIAAWFAGLFYLPRIYVNLAMETDPAAVRRLLLMARKLFRFMTMIAVPALACGLWLWLSIGIGQGQGWI
HAKVTVVLLLIVYHAYCGHLLRVFERGENRRTDKWYRVFNELPVLGMLAAVALVVIKPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR008457
- InterPro:   IPR005265 [H]

Pfam domain/function: PF05425 CopD; PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 16074; Mature: 15943

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMLWVKTFHIVLIAAWFAGLFYLPRIYVNLAMETDPAAVRRLLLMARKLFRFMTMIAVP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALACGLWLWLSIGIGQGQGWIHAKVTVVLLLIVYHAYCGHLLRVFERGENRRTDKWYRVF
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
NELPVLGMLAAVALVVIKPF
HHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AMLWVKTFHIVLIAAWFAGLFYLPRIYVNLAMETDPAAVRRLLLMARKLFRFMTMIAVP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALACGLWLWLSIGIGQGQGWIHAKVTVVLLLIVYHAYCGHLLRVFERGENRRTDKWYRVF
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
NELPVLGMLAAVALVVIKPF
HHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]