| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is tkt1 [H]
Identifier: 78065198
GI number: 78065198
Start: 610203
End: 612275
Strand: Direct
Name: tkt1 [H]
Synonym: Bcep18194_A3722
Alternate gene names: 78065198
Gene position: 610203-612275 (Clockwise)
Preceding gene: 78065194
Following gene: 78065199
Centisome position: 16.52
GC content: 66.86
Gene sequence:
>2073_bases ATGCCGCCGTGCCCCCGTTTCCTCGACTCGTTCTCCGGACTCGACATGACGACTTCGTCTCCCGCCTCCACCACCCTGAT GGCCAACGCGATCCGTGCGCTCGCAATGGACGCCGTCCAGCAAGCGAACTCCGGCCACCCCGGCATGCCGATGGGCATGG CCGAAATCGGCGTCGCGCTCTGGTCGCGCCATCTGAAGCACAACCCGACGAACCCGCACTGGGCGGACCGCGACCGCTTC GTGCTGTCGAACGGCCATGGCTCGATGCTGCTGTACTCGCTGCTGCACCTGACCGGCTACGACCTGCCGATGGAAGAGCT GAAGAACTTCCGCCAGCTGCACTCGAAGACGCCGGGCCACCCGGAATACGGCATCACGCCGGGCGTCGAGACGACCACCG GCCCGCTCGGCCAGGGGCTCGCGAACGCGGTCGGCATGGCGCTCGGCGAAGCGCTGATGGCCGACGAGTTCAACCGCGAC GGCGCGAAGATCGTCGATCACCACACGTACGTGTTCCTCGGCGACGGCTGCCTGATGGAAGGCATCTCGCACGAAGCCTG CTCGCTCGCCGGCACGCTGAAGCTGAACAAGCTGATCGCGCTGTACGACGACAACGGCATCTCGATCGACGGCGACGTCG TGAACTGGTTCCACGACGACACCCCGAAGCGTTTCGAAGCCTACGGCTGGAACGTGATCCCGCACGTGAACGGCCATGAC GTCGACGCGGTCGACGCAGCCATCGCAAAGGCGAAGCTGTCGGACAAGCCGACGCTGATCTGCTGCAAGACGGTGATCGG CCAGGGCGCGGCGACCAAGGCCGGCGGCCACGACGTGCACGGCGCGGCGCTCGGCGCGGAAGAAATCGCGAAGACGCGCG AAGCGCTCGGCTGGACGTGGGCACCGTTCGTGATTCCGCAGGAAGTCTATGCGGCATGGGACGCGAAGGAAGCCGGCAAG CGCGCGGAAACCGAATGGGATGCGACGTTCGCTGCTTATCGCGCCAAGTTCCCGGCAGAAGCCGCTGAATTCGAGCGCCG GATGGCCAACCAGCTGCCGGCCGACTGGGCCGAAAAGGCTGCGGCGATCATCGCCGGCGCGAACGAGCGCGGCGAGACGG TGGCGACCCGCAAGGCGTCGCAGCAGGCGATCGAAGGCCTGGCTGCCGCGCTGCCCGAGCTGCTCGGCGGCTCGGCCGAC CTGACCGGCTCGAACCTGACCAACTGGAAGGCGTCGAAGGCCGTCCGTGCGAATCCGGAAGGCCCGGGCGTCCAGCTGGG CAACCACATCAACTACGGCGTGCGCGAATTCGGCATGAGCGCCGCGATCAACGGCCTCGCGCTGCATGGCGGCCACAAGC CGTTCGGCGGCACGTTCCTGACGTTCTCCGACTACAGCCGCAACGCGCTGCGCGTGGCTGCGCTGATGAAGGTGCCGTCG ATCTTCGTGTTCACGCACGATTCGATCGGCCTCGGCGAAGACGGCCCGACGCACCAGTCGATCGAGCACGTGTCGAGCCT GCGCCTGATCCCGAACCACGACGTGTGGCGCCCGGCCGACACGGTCGAGACGGCCGTCGCATGGACCCACGCGATCGCCG CCGACCGTCCGTCGAGCCTGATCTTCAGCCGCCAGAACCTCGCGTTCAACCCGCGTACCGATGCGCAGATCGCGAACATC GAGAAGGGCGGTTACGTGCTGAAGGACTGGGACGAAGAGATCGTCGCGCGCAAGATCATCCTGATCGCGACGGGCTCGGA AGTCGAACTCGCGATGAAGGCCATCGAGCCGCTCGCGCAGCAAGGTATCGCGGCACGTGTCGTGTCGATGCCGTCGACCA ACGTGTTCGACCGCCAGGACGCCGAATACCGTGAACGCGTGCTGCCGCACGGCGTGCGCCGCGTCGCGATCGAAGCGGGC GTGACCGCCTTCTGGCACAAGTACGTCGGCCTCGAAGGCGGCGTCGTCGGGATCGACACGTTCGGTGAATCGGCGCCGGC CGGCGTGCTGTTCAAGTACTTCGGCTTCACCGTCGAGCACGTCGTCGAGACCGCCAAGGCCGTGCTGGCCTAA
Upstream 100 bases:
>100_bases AAAATGACGAGCTTTGCAGCCCCGTCCGTAGGCTCCGTCCGCTTCGCGTCCGTCAGGCGCCGCACCGCGCGCCGGGAACG ATCGACGCTCGAGCTTCCGG
Downstream 100 bases:
>100_bases AGAGACATACGCGACGCGCGCCCCCCCCTCGCGCGCGTCGCACCGTGAAGCTGCACGAAACGAATTTTTTTCAGCCATCA GGAGATAGACCATGACGATT
Product: transketolase
Products: NA
Alternate protein names: TK 1 [H]
Number of amino acids: Translated: 690; Mature: 689
Protein sequence:
>690_residues MPPCPRFLDSFSGLDMTTSSPASTTLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVALWSRHLKHNPTNPHWADRDRF VLSNGHGSMLLYSLLHLTGYDLPMEELKNFRQLHSKTPGHPEYGITPGVETTTGPLGQGLANAVGMALGEALMADEFNRD GAKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPHVNGHD VDAVDAAIAKAKLSDKPTLICCKTVIGQGAATKAGGHDVHGAALGAEEIAKTREALGWTWAPFVIPQEVYAAWDAKEAGK RAETEWDATFAAYRAKFPAEAAEFERRMANQLPADWAEKAAAIIAGANERGETVATRKASQQAIEGLAAALPELLGGSAD LTGSNLTNWKASKAVRANPEGPGVQLGNHINYGVREFGMSAAINGLALHGGHKPFGGTFLTFSDYSRNALRVAALMKVPS IFVFTHDSIGLGEDGPTHQSIEHVSSLRLIPNHDVWRPADTVETAVAWTHAIAADRPSSLIFSRQNLAFNPRTDAQIANI EKGGYVLKDWDEEIVARKIILIATGSEVELAMKAIEPLAQQGIAARVVSMPSTNVFDRQDAEYRERVLPHGVRRVAIEAG VTAFWHKYVGLEGGVVGIDTFGESAPAGVLFKYFGFTVEHVVETAKAVLA
Sequences:
>Translated_690_residues MPPCPRFLDSFSGLDMTTSSPASTTLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVALWSRHLKHNPTNPHWADRDRF VLSNGHGSMLLYSLLHLTGYDLPMEELKNFRQLHSKTPGHPEYGITPGVETTTGPLGQGLANAVGMALGEALMADEFNRD GAKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPHVNGHD VDAVDAAIAKAKLSDKPTLICCKTVIGQGAATKAGGHDVHGAALGAEEIAKTREALGWTWAPFVIPQEVYAAWDAKEAGK RAETEWDATFAAYRAKFPAEAAEFERRMANQLPADWAEKAAAIIAGANERGETVATRKASQQAIEGLAAALPELLGGSAD LTGSNLTNWKASKAVRANPEGPGVQLGNHINYGVREFGMSAAINGLALHGGHKPFGGTFLTFSDYSRNALRVAALMKVPS IFVFTHDSIGLGEDGPTHQSIEHVSSLRLIPNHDVWRPADTVETAVAWTHAIAADRPSSLIFSRQNLAFNPRTDAQIANI EKGGYVLKDWDEEIVARKIILIATGSEVELAMKAIEPLAQQGIAARVVSMPSTNVFDRQDAEYRERVLPHGVRRVAIEAG VTAFWHKYVGLEGGVVGIDTFGESAPAGVLFKYFGFTVEHVVETAKAVLA >Mature_689_residues PPCPRFLDSFSGLDMTTSSPASTTLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVALWSRHLKHNPTNPHWADRDRFV LSNGHGSMLLYSLLHLTGYDLPMEELKNFRQLHSKTPGHPEYGITPGVETTTGPLGQGLANAVGMALGEALMADEFNRDG AKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPHVNGHDV DAVDAAIAKAKLSDKPTLICCKTVIGQGAATKAGGHDVHGAALGAEEIAKTREALGWTWAPFVIPQEVYAAWDAKEAGKR AETEWDATFAAYRAKFPAEAAEFERRMANQLPADWAEKAAAIIAGANERGETVATRKASQQAIEGLAAALPELLGGSADL TGSNLTNWKASKAVRANPEGPGVQLGNHINYGVREFGMSAAINGLALHGGHKPFGGTFLTFSDYSRNALRVAALMKVPSI FVFTHDSIGLGEDGPTHQSIEHVSSLRLIPNHDVWRPADTVETAVAWTHAIAADRPSSLIFSRQNLAFNPRTDAQIANIE KGGYVLKDWDEEIVARKIILIATGSEVELAMKAIEPLAQQGIAARVVSMPSTNVFDRQDAEYRERVLPHGVRRVAIEAGV TAFWHKYVGLEGGVVGIDTFGESAPAGVLFKYFGFTVEHVVETAKAVLA
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=606, Percent_Identity=28.0528052805281, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI4507521, Length=606, Percent_Identity=28.0528052805281, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI133778974, Length=589, Percent_Identity=26.3157894736842, Blast_Score=138, Evalue=2e-32, Organism=Escherichia coli, GI48994911, Length=671, Percent_Identity=62.8912071535022, Blast_Score=863, Evalue=0.0, Organism=Escherichia coli, GI1788808, Length=666, Percent_Identity=60.3603603603604, Blast_Score=808, Evalue=0.0, Organism=Caenorhabditis elegans, GI17539652, Length=682, Percent_Identity=26.5395894428152, Blast_Score=164, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6325331, Length=673, Percent_Identity=49.777117384844, Blast_Score=610, Evalue=1e-175, Organism=Saccharomyces cerevisiae, GI6319593, Length=679, Percent_Identity=46.0972017673049, Blast_Score=558, Evalue=1e-159, Organism=Drosophila melanogaster, GI45551847, Length=709, Percent_Identity=25.5289139633286, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI45550715, Length=709, Percent_Identity=25.5289139633286, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI24666278, Length=674, Percent_Identity=24.9258160237389, Blast_Score=146, Evalue=5e-35, Organism=Drosophila melanogaster, GI24645119, Length=660, Percent_Identity=25.3030303030303, Blast_Score=139, Evalue=6e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 74210; Mature: 74078
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS00801 TRANSKETOLASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPCPRFLDSFSGLDMTTSSPASTTLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVAL CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH WSRHLKHNPTNPHWADRDRFVLSNGHGSMLLYSLLHLTGYDLPMEELKNFRQLHSKTPGH HHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC PEYGITPGVETTTGPLGQGLANAVGMALGEALMADEFNRDGAKIVDHHTYVFLGDGCLME CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCCHHHH GISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPHVNGHD CCCHHHHHHHHHEEEEEEEEEECCCCCEECCCEEECCCCCCCCHHHHCCCEEECCCCCCC VDAVDAAIAKAKLSDKPTLICCKTVIGQGAATKAGGHDVHGAALGAEEIAKTREALGWTW CHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCC APFVIPQEVYAAWDAKEAGKRAETEWDATFAAYRAKFPAEAAEFERRMANQLPADWAEKA CCCCCCHHHHHHCCHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHH AAIIAGANERGETVATRKASQQAIEGLAAALPELLGGSADLTGSNLTNWKASKAVRANPE HEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCC GPGVQLGNHINYGVREFGMSAAINGLALHGGHKPFGGTFLTFSDYSRNALRVAALMKVPS CCCCEECCCCCCCHHHHHHHHHHCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHCCE IFVFTHDSIGLGEDGPTHQSIEHVSSLRLIPNHDVWRPADTVETAVAWTHAIAADRPSSL EEEEECCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHH IFSRQNLAFNPRTDAQIANIEKGGYVLKDWDEEIVARKIILIATGSEVELAMKAIEPLAQ EEECCCCCCCCCCCCEEEEECCCCEEEECCHHHHHHCEEEEEEECCHHHHHHHHHHHHHH QGIAARVVSMPSTNVFDRQDAEYRERVLPHGVRRVAIEAGVTAFWHKYVGLEGGVVGIDT CCHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC FGESAPAGVLFKYFGFTVEHVVETAKAVLA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PPCPRFLDSFSGLDMTTSSPASTTLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVAL CCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH WSRHLKHNPTNPHWADRDRFVLSNGHGSMLLYSLLHLTGYDLPMEELKNFRQLHSKTPGH HHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC PEYGITPGVETTTGPLGQGLANAVGMALGEALMADEFNRDGAKIVDHHTYVFLGDGCLME CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCCHHHH GISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPHVNGHD CCCHHHHHHHHHEEEEEEEEEECCCCCEECCCEEECCCCCCCCHHHHCCCEEECCCCCCC VDAVDAAIAKAKLSDKPTLICCKTVIGQGAATKAGGHDVHGAALGAEEIAKTREALGWTW CHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCC APFVIPQEVYAAWDAKEAGKRAETEWDATFAAYRAKFPAEAAEFERRMANQLPADWAEKA CCCCCCHHHHHHCCHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHH AAIIAGANERGETVATRKASQQAIEGLAAALPELLGGSADLTGSNLTNWKASKAVRANPE HEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCC GPGVQLGNHINYGVREFGMSAAINGLALHGGHKPFGGTFLTFSDYSRNALRVAALMKVPS CCCCEECCCCCCCHHHHHHHHHHCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHCCE IFVFTHDSIGLGEDGPTHQSIEHVSSLRLIPNHDVWRPADTVETAVAWTHAIAADRPSSL EEEEECCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHH IFSRQNLAFNPRTDAQIANIEKGGYVLKDWDEEIVARKIILIATGSEVELAMKAIEPLAQ EEECCCCCCCCCCCCEEEEECCCCEEEECCHHHHHHCEEEEEEECCHHHHHHHHHHHHHH QGIAARVVSMPSTNVFDRQDAEYRERVLPHGVRRVAIEAGVTAFWHKYVGLEGGVVGIDT CCHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC FGESAPAGVLFKYFGFTVEHVVETAKAVLA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]