| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
Click here to switch to the map view.
The map label for this gene is secG [H]
Identifier: 78048410
GI number: 78048410
Start: 3246903
End: 3247376
Strand: Reverse
Name: secG [H]
Synonym: XCV2854
Alternate gene names: 78048410
Gene position: 3247376-3246903 (Counterclockwise)
Preceding gene: 78048411
Following gene: 78048409
Centisome position: 62.71
GC content: 67.72
Gene sequence:
>474_bases ATGCTGATGTTGATCCTCAATGTGATCTACGTGCTGGTCGCCCTGGCGATGATTGCGCTGATTCTGATGCAGCGTGGCGC AGGTGCGGCGGCCGGTTCCGGCTTCGGCGCCGGCGCGTCCGGCACCGTGTTCGGTTCGCAGGGTGCGTCGAACTTCCTGT CCAAGTCGACCAAGTGGCTGGCGGTGGTGTTCTTCAGCATCAGCCTGTTCATGGCGTGGTACGCCACGCACGGCGCACGT CCTACGGATCAGAACCTGGGTGTGATGTCGCAGTCGGCAACCCCGGCTCCGGCCGCCGCCGGCGAGCTCACCCAGCCGTT GCCGCAGGCCCCGGCCGCAGGTGCGGTGCCGACCGCTCCGTCGCAGCCGGCTCCGGCCGCTGCCCCGGCAGTGGCGCCTG CGCAGTCCGCACCGGCGCAGCCGGCGCCTGCAGCAAGCGAAGAAAACGCTTCAGAACCAGCACAAAAACGCTGA
Upstream 100 bases:
>100_bases AGTCGGAGGCGCGTCACTGGTCGCCGAAGATTTCCTGGCCATCGCACGCGCGGCGGCCGCGTGCTAACCCATTAAGTTTT GTCCGGGGACGGATTTCGAA
Downstream 100 bases:
>100_bases AGCCGGTTACAATACGCTGCGCACTGGGATGCCCGGCGGCGCAACGTATGCCCAGGTGGCGGAATTGGTAGACGCACTAC CTTGAGGTGGTAGCGACTTA
Product: preprotein translocase subunit SecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MLMLILNVIYVLVALAMIALILMQRGAGAAAGSGFGAGASGTVFGSQGASNFLSKSTKWLAVVFFSISLFMAWYATHGAR PTDQNLGVMSQSATPAPAAAGELTQPLPQAPAAGAVPTAPSQPAPAAAPAVAPAQSAPAQPAPAASEENASEPAQKR
Sequences:
>Translated_157_residues MLMLILNVIYVLVALAMIALILMQRGAGAAAGSGFGAGASGTVFGSQGASNFLSKSTKWLAVVFFSISLFMAWYATHGAR PTDQNLGVMSQSATPAPAAAGELTQPLPQAPAAGAVPTAPSQPAPAAAPAVAPAQSAPAQPAPAASEENASEPAQKR >Mature_157_residues MLMLILNVIYVLVALAMIALILMQRGAGAAAGSGFGAGASGTVFGSQGASNFLSKSTKWLAVVFFSISLFMAWYATHGAR PTDQNLGVMSQSATPAPAAAGELTQPLPQAPAAGAVPTAPSQPAPAAAPAVAPAQSAPAQPAPAASEENASEPAQKR
Specific function: Involved in protein export. Participates in an early event of protein translocation [H]
COG id: COG1314
COG function: function code U; Preprotein translocase subunit SecG
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secG family [H]
Homologues:
Organism=Escherichia coli, GI1789565, Length=106, Percent_Identity=36.7924528301887, Blast_Score=71, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004692 [H]
Pfam domain/function: PF03840 SecG [H]
EC number: NA
Molecular weight: Translated: 15599; Mature: 15599
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMLILNVIYVLVALAMIALILMQRGAGAAAGSGFGAGASGTVFGSQGASNFLSKSTKWL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHH AVVFFSISLFMAWYATHGARPTDQNLGVMSQSATPAPAAAGELTQPLPQAPAAGAVPTAP HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC SQPAPAAAPAVAPAQSAPAQPAPAASEENASEPAQKR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLMLILNVIYVLVALAMIALILMQRGAGAAAGSGFGAGASGTVFGSQGASNFLSKSTKWL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHH AVVFFSISLFMAWYATHGARPTDQNLGVMSQSATPAPAAAGELTQPLPQAPAAGAVPTAP HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC SQPAPAAAPAVAPAQSAPAQPAPAASEENASEPAQKR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]