Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
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Accession | NC_007508 |
Length | 5,178,466 |
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The map label for this gene is yehV [C]
Identifier: 78048344
GI number: 78048344
Start: 3168763
End: 3169119
Strand: Reverse
Name: yehV [C]
Synonym: XCV2788
Alternate gene names: 78048344
Gene position: 3169119-3168763 (Counterclockwise)
Preceding gene: 78048345
Following gene: 78048343
Centisome position: 61.2
GC content: 61.9
Gene sequence:
>357_bases ATGCTGGATCCGGGCAGTAATCGCGAGCTACCGCCGATCCCGGCCAAGCGCTATTTCACCATTGGTGAGGTCAGCGAGCT ATGCGACGTCAAGCCGCATGTGCTGCGCTATTGGGAAACCGAGTTTCCCAGCCTGGAGCCGGTCAAGCGGCGCGGGAACC GGCGCTACTACCAGCGACATGACGTGCTGATGGTGCGTCAGATCCGCGGGTTGCTGTACGAACAGGGCTATACCATCGGC GGTGCGCGCTTGCGTCTGGAGGGCGATGGCGCCAAGAGCGAGTCGGCGCTGAGCAATCAGATCATCAAGCAGGTGCGGAT GGAGCTGGAAGAAGTCCTGCAACTGCTGCGCCGCTAG
Upstream 100 bases:
>100_bases CCCGGTCGCAATCCCAAGACCGGCGAAGAAATTCCGATCTCGGCACGGACGGTGGTGACGTTCCGCCCCGGCCAAAAACT CAAGGAACGGGTGGAGGCTT
Downstream 100 bases:
>100_bases GAAAACGTTTCACAAAGCCGCTATAATCGCAGGCCGCCCTCGCGGCGGAGCGCAGCATCTTCGGGGTATAGCGCAGCCTG GTAGCGCACTAGTCTGGGGG
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcription Regulator Protein; Regulatory Protein MerR; Transcriptional Regulator Merr Family; MerR-Family Transcriptional Regulator; Trancriptional Regulator MerR Family; Transcriptional Regulator Protein; MerR Family Regulatory Protein; Transcriptional Regulator MerR; TRANSCRIPTIONal REGULATOR MerR Family; Transcriptional Regulatory Protein; Regulatory Protein Merr; MerR Family Regulatory Family; Transcriptional Regulator Protein MerR Family; Bacterial Transferase Hexapeptide Repeat Protein; Transcriptional Regulator Domain-Containing Protein; MerR Protein
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRHDVLMVRQIRGLLYEQGYTIG GARLRLEGDGAKSESALSNQIIKQVRMELEEVLQLLRR
Sequences:
>Translated_118_residues MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRHDVLMVRQIRGLLYEQGYTIG GARLRLEGDGAKSESALSNQIIKQVRMELEEVLQLLRR >Mature_118_residues MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRHDVLMVRQIRGLLYEQGYTIG GARLRLEGDGAKSESALSNQIIKQVRMELEEVLQLLRR
Specific function: Unknown
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13826; Mature: 13826
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRH CCCCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHCCCCCHHHHH DVLMVRQIRGLLYEQGYTIGGARLRLEGDGAKSESALSNQIIKQVRMELEEVLQLLRR HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRH CCCCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHCCCCCHHHHH DVLMVRQIRGLLYEQGYTIGGARLRLEGDGAKSESALSNQIIKQVRMELEEVLQLLRR HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA