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The map label for this gene is fdx [H]

Identifier: 78048263

GI number: 78048263

Start: 3067396

End: 3067860

Strand: Reverse

Name: fdx [H]

Synonym: XCV2707

Alternate gene names: 78048263

Gene position: 3067860-3067396 (Counterclockwise)

Preceding gene: 78048264

Following gene: 78048262

Centisome position: 59.24

GC content: 64.73

Gene sequence:

>465_bases
ATGCACCATGCTGCCGAGTTCGCACTCCACCGGAGCCGGCCGCACCAGGCCGGTGTCCGACAGCGCCCAGGGCGCTATCT
ACCTGCCGCTGCGCGCCATGGGCGCCCGGCTGCAGCAGCACATTGCGTTCCAGCGCCTGCGGTTGCAGCGCGCCGCGTCG
CGTCGCATCGTAGTGCCGATATGTCTCTGAAAATCAACGAGCTCTGCGTCAACTGCGACGTCTGCGAGCCTGCGTGCCCG
AATCACGCCATCTCGATGGGCGAAACCATCTACGTCATCGATCCGGCACGTTGCACCGAGTGCGTGGGCCATTTCGACGA
AGCGCAGTGCGTGGTGGTGTGCCCGGTCGAATGCATCGATCCGGATCCGGCCATTCCGGAAACCCATGACCAGTTGCTGG
CCAAGCTGATGCAGTTGCAGCGCGATCACCCCGAACTGTACGAACAGGAGCCCCCCGCCCCGTGA

Upstream 100 bases:

>100_bases
CATCGTCCAGCCCAAGGGCGCGGAATACATCTTCGTTGAAGCCAAGTAATGCCGTAGCAGGCCGGATGCGCGGAAGGGCG
CATCCGGCCGCAGCCTGGGA

Downstream 100 bases:

>100_bases
GCACTTTTTCCCGTCGTTTTTCTTCGCGCGGCGTGTTGCTGCTGGCCTTTGTGCTGGCGCCAGCGGCCTGGTGCGCCGAT
GCCGCCAAGCCGGCGACGGC

Product: putative ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MHHAAEFALHRSRPHQAGVRQRPGRYLPAAARHGRPAAAAHCVPAPAVAARRVASHRSADMSLKINELCVNCDVCEPACP
NHAISMGETIYVIDPARCTECVGHFDEAQCVVVCPVECIDPDPAIPETHDQLLAKLMQLQRDHPELYEQEPPAP

Sequences:

>Translated_154_residues
MHHAAEFALHRSRPHQAGVRQRPGRYLPAAARHGRPAAAAHCVPAPAVAARRVASHRSADMSLKINELCVNCDVCEPACP
NHAISMGETIYVIDPARCTECVGHFDEAQCVVVCPVECIDPDPAIPETHDQLLAKLMQLQRDHPELYEQEPPAP
>Mature_154_residues
MHHAAEFALHRSRPHQAGVRQRPGRYLPAAARHGRPAAAAHCVPAPAVAARRVASHRSADMSLKINELCVNCDVCEPACP
NHAISMGETIYVIDPARCTECVGHFDEAQCVVVCPVECIDPDPAIPETHDQLLAKLMQLQRDHPELYEQEPPAP

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=80, Percent_Identity=51.25, Blast_Score=83, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16845; Mature: 16845

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHAAEFALHRSRPHQAGVRQRPGRYLPAAARHGRPAAAAHCVPAPAVAARRVASHRSAD
CCCHHHHHHHCCCCCCCCHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCC
MSLKINELCVNCDVCEPACPNHAISMGETIYVIDPARCTECVGHFDEAQCVVVCPVECID
CEEEEHHEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCCCEEEECCHHHCC
PDPAIPETHDQLLAKLMQLQRDHPELYEQEPPAP
CCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCC
>Mature Secondary Structure
MHHAAEFALHRSRPHQAGVRQRPGRYLPAAARHGRPAAAAHCVPAPAVAARRVASHRSAD
CCCHHHHHHHCCCCCCCCHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCC
MSLKINELCVNCDVCEPACPNHAISMGETIYVIDPARCTECVGHFDEAQCVVVCPVECID
CEEEEHHEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCCCEEEECCHHHCC
PDPAIPETHDQLLAKLMQLQRDHPELYEQEPPAP
CCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8765743; 893371; 8880900 [H]