| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is purB [H]
Identifier: 78047138
GI number: 78047138
Start: 1787361
End: 1788728
Strand: Reverse
Name: purB [H]
Synonym: XCV1582
Alternate gene names: 78047138
Gene position: 1788728-1787361 (Counterclockwise)
Preceding gene: 78047140
Following gene: 78047137
Centisome position: 34.54
GC content: 66.45
Gene sequence:
>1368_bases ATGTCGGATTCCGCCCTGCTCGCCCTGTCCCCGCTCGACGGCCGCTACGCTTCCAAGGTGGATGCGCTGCGCCCGATCTT CTCCGAATACGGCCTGATCAAGGCGCGGGTCAAGGTCGAAATCGAATGGCTGCTGGCACTGGCCGCCGAGCCGGGCATCG CCGAACTGGCGCCGTTCTCGCCGGCTGCCGCGCAGCGCCTGCGCGCCCTGGCCGACGATTTCAGCGTGGCGCATGCCGCG CGGGTCAAGGAGATCGAGCGCACCACCAACCATGACGTCAAGGCGGTGGAGTACTTCATCAAGGAGCAGCTCAAGGACGA CGCCGAGCTGGGTCCGGCGCTGGAATTCGTGCACTTTGCCTGCACCAGCGAAGACATCAACAACCTCAGCTACGGGCTGA TGCTGGAGCAGGCCCGCCGCGAGATGCTGCTGCCCAGCCTGGACGGCATTACCGCCGCGTTGCGCACCCTCGCCCACGCC CAGGCCGCCCAGCCGATGCTCTCGCGCACCCACGGCCAGACCGCCTCGCCCACCACGCTGGGCAAGGAAATCGCCAATGT GGTCGCGCGCCTGGAGCGCCAGCGCAAGCAGATCGCCGCGGTCGAACTGACCGGCAAGATCAACGGCGCGGTCGGCAACT ACAACGCGCACCTGGTGTCGTACCCGGACCTGGACTGGGCAGCGTTCGCACAGCGTTTCGTGGAAAGCCTGGGGCTGGTG TTCAATCCCTACACCACCCAGATCGAGCCGCACGACAATGTGGCCGAAATCGGCGATGCCAGCCGCCGCGCCAACACCAT CCTGATCGACCTGGCGCGCGACATCTGGGGCTATATCTCGCTGGGCTACTTCAAGCAGAAGCTGAAAGAGGGCGAAGTCG GCTCCTCGACCATGCCGCACAAGGTCAACCCCATCGACTTCGAAAATGCCGAGGGCAATCTCGGCATCGCCAACGCGCTG TTCGAGCACTTTTCCGCCAAGTTGCCGATCAGCCGCTGGCAGCGCGACCTCACCGACTCCACCGTGCTACGCGCACTCGG CACCGCGTTCGGCCACACCCAGGTCGCGCTGGATTCGCTGGCCAAGGGCCTGGGCAAGCTCACCGTCAACCCCGAGCGCC TGGATGCCGACCTGGATGCGGCCTGGGAAGTGCTGGCCGAAGCCGTACAGACGGTCATGCGCCGCCACGGCCTGCCGAAC CCCTACGAACAACTCAAGGCGCTGACCCGCGGCCAGGGCATCACCGCCGCCTCGATGCAAGCTTTCGTGGAAAGCCTGCA ACTGCCGGAAGACGACAAGCAGCGCCTGCGCGCGCTCACCCCGGGCGCCTATACCGGCCTGGCCGAGCAGCTGGCGCGCG CGATCTGA
Upstream 100 bases:
>100_bases TGGCGTGGGCCTGGCAACCCACTTTCCAGCGCAGCGGGCCTGCCCGCGGCCCTGGCGGCGTAGAATGCTGGCCCCACCAT CACCGCTGCCGCCCTTGCCC
Downstream 100 bases:
>100_bases GCAGACCGAACCGCACGCGGTGCAGGGCTTGCGAAGCGGGCCACGTCATCGGACCTCATCGGCGAAGCTGCATCGGCATC ACCACATGCCGATGCAGCAC
Product: adenylosuccinate lyase
Products: NA
Alternate protein names: ASL; Adenylosuccinase; ASase [H]
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MSDSALLALSPLDGRYASKVDALRPIFSEYGLIKARVKVEIEWLLALAAEPGIAELAPFSPAAAQRLRALADDFSVAHAA RVKEIERTTNHDVKAVEYFIKEQLKDDAELGPALEFVHFACTSEDINNLSYGLMLEQARREMLLPSLDGITAALRTLAHA QAAQPMLSRTHGQTASPTTLGKEIANVVARLERQRKQIAAVELTGKINGAVGNYNAHLVSYPDLDWAAFAQRFVESLGLV FNPYTTQIEPHDNVAEIGDASRRANTILIDLARDIWGYISLGYFKQKLKEGEVGSSTMPHKVNPIDFENAEGNLGIANAL FEHFSAKLPISRWQRDLTDSTVLRALGTAFGHTQVALDSLAKGLGKLTVNPERLDADLDAAWEVLAEAVQTVMRRHGLPN PYEQLKALTRGQGITAASMQAFVESLQLPEDDKQRLRALTPGAYTGLAEQLARAI
Sequences:
>Translated_455_residues MSDSALLALSPLDGRYASKVDALRPIFSEYGLIKARVKVEIEWLLALAAEPGIAELAPFSPAAAQRLRALADDFSVAHAA RVKEIERTTNHDVKAVEYFIKEQLKDDAELGPALEFVHFACTSEDINNLSYGLMLEQARREMLLPSLDGITAALRTLAHA QAAQPMLSRTHGQTASPTTLGKEIANVVARLERQRKQIAAVELTGKINGAVGNYNAHLVSYPDLDWAAFAQRFVESLGLV FNPYTTQIEPHDNVAEIGDASRRANTILIDLARDIWGYISLGYFKQKLKEGEVGSSTMPHKVNPIDFENAEGNLGIANAL FEHFSAKLPISRWQRDLTDSTVLRALGTAFGHTQVALDSLAKGLGKLTVNPERLDADLDAAWEVLAEAVQTVMRRHGLPN PYEQLKALTRGQGITAASMQAFVESLQLPEDDKQRLRALTPGAYTGLAEQLARAI >Mature_454_residues SDSALLALSPLDGRYASKVDALRPIFSEYGLIKARVKVEIEWLLALAAEPGIAELAPFSPAAAQRLRALADDFSVAHAAR VKEIERTTNHDVKAVEYFIKEQLKDDAELGPALEFVHFACTSEDINNLSYGLMLEQARREMLLPSLDGITAALRTLAHAQ AAQPMLSRTHGQTASPTTLGKEIANVVARLERQRKQIAAVELTGKINGAVGNYNAHLVSYPDLDWAAFAQRFVESLGLVF NPYTTQIEPHDNVAEIGDASRRANTILIDLARDIWGYISLGYFKQKLKEGEVGSSTMPHKVNPIDFENAEGNLGIANALF EHFSAKLPISRWQRDLTDSTVLRALGTAFGHTQVALDSLAKGLGKLTVNPERLDADLDAAWEVLAEAVQTVMRRHGLPNP YEQLKALTRGQGITAASMQAFVESLQLPEDDKQRLRALTPGAYTGLAEQLARAI
Specific function: De novo purine biosynthesis; eighth step. [C]
COG id: COG0015
COG function: function code F; Adenylosuccinate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787376, Length=448, Percent_Identity=58.4821428571429, Blast_Score=551, Evalue=1e-158,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013539 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 - InterPro: IPR004769 [H]
Pfam domain/function: PF08328 ASL_C; PF00206 Lyase_1 [H]
EC number: =4.3.2.2 [H]
Molecular weight: Translated: 49782; Mature: 49651
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSALLALSPLDGRYASKVDALRPIFSEYGLIKARVKVEIEWLLALAAEPGIAELAPFS CCCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEHHEEEHHHHHHHHCCCCHHHCCCCC PAAAQRLRALADDFSVAHAARVKEIERTTNHDVKAVEYFIKEQLKDDAELGPALEFVHFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHCCHHHHHHHHH CTSEDINNLSYGLMLEQARREMLLPSLDGITAALRTLAHAQAAQPMLSRTHGQTASPTTL HCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH GKEIANVVARLERQRKQIAAVELTGKINGAVGNYNAHLVSYPDLDWAAFAQRFVESLGLV HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCE FNPYTTQIEPHDNVAEIGDASRRANTILIDLARDIWGYISLGYFKQKLKEGEVGSSTMPH ECCCCCCCCCCCCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC KVNPIDFENAEGNLGIANALFEHFSAKLPISRWQRDLTDSTVLRALGTAFGHTQVALDSL CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH AKGLGKLTVNPERLDADLDAAWEVLAEAVQTVMRRHGLPNPYEQLKALTRGQGITAASMQ HHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHH AFVESLQLPEDDKQRLRALTPGAYTGLAEQLARAI HHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure SDSALLALSPLDGRYASKVDALRPIFSEYGLIKARVKVEIEWLLALAAEPGIAELAPFS CCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEHHEEEHHHHHHHHCCCCHHHCCCCC PAAAQRLRALADDFSVAHAARVKEIERTTNHDVKAVEYFIKEQLKDDAELGPALEFVHFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHCCHHHHHHHHH CTSEDINNLSYGLMLEQARREMLLPSLDGITAALRTLAHAQAAQPMLSRTHGQTASPTTL HCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH GKEIANVVARLERQRKQIAAVELTGKINGAVGNYNAHLVSYPDLDWAAFAQRFVESLGLV HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCE FNPYTTQIEPHDNVAEIGDASRRANTILIDLARDIWGYISLGYFKQKLKEGEVGSSTMPH ECCCCCCCCCCCCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC KVNPIDFENAEGNLGIANALFEHFSAKLPISRWQRDLTDSTVLRALGTAFGHTQVALDSL CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH AKGLGKLTVNPERLDADLDAAWEVLAEAVQTVMRRHGLPNPYEQLKALTRGQGITAASMQ HHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHH AFVESLQLPEDDKQRLRALTPGAYTGLAEQLARAI HHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]