| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78047137
Identifier: 78047137
GI number: 78047137
Start: 1786617
End: 1787117
Strand: Reverse
Name: 78047137
Synonym: XCV1581
Alternate gene names: NA
Gene position: 1787117-1786617 (Counterclockwise)
Preceding gene: 78047138
Following gene: 78047136
Centisome position: 34.51
GC content: 63.27
Gene sequence:
>501_bases ATGCGCGTCACTCATACGGCACTGACCCTGTTGACGCTGGGAAGCGTCCTCGCACTGAGCGGATGCGGCGGCGATGGCCC CGCCGCGCAGGCCCCGTCGGCGGTATCTAACACGCTGACCGATCCGGCCAGCGGCGCAGACTGTGCCGGCAAGGATGTCC GGCTGACCCGCAATGACAGCGAATGGATCCTGCACGGCGAGTGCGGCACGGTCACCATCACCGCCTCGCGTGGCGCGATG AATCTGGACACCGCGCGCAGCATTCGCCTGGAGGGAAGCAACTTCACGGTGCTCAACCAGCAACTTGGCCAGCTCAGCGT GAGCGGTCACGACAACACGCTCAATCTCACCGATGTCGATCGCGTGGATATCCAGGGCAACAAGAATCTTGTGCTCGCGC GCGCCGTGAAACAGGTGCGGTTTTCGGGCAACGACAACACCGTCAACCCATCCAGCAAGCCTGTACTGGACGACCGTGGC AGCGGCAACAAGGTGATGTGA
Upstream 100 bases:
>100_bases CGCGTCGCCCCCCGCACGCGGACGGGCGGCCGGCGAGGGCCTGCACATGGTGACCGAACCGGACTGCTATCGTGCCGGCC TCACTTTCAGGAGATCGGCG
Downstream 100 bases:
>100_bases TGCGCGCTGGTGCGCTATCGGCGCACGCGGCGATCGGCGTGCGCCGATAGCGCCACCATGCCGCTCGCAAGGCCATCGAC ATCAAGAAGCGATCGGAAAT
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MRVTHTALTLLTLGSVLALSGCGGDGPAAQAPSAVSNTLTDPASGADCAGKDVRLTRNDSEWILHGECGTVTITASRGAM NLDTARSIRLEGSNFTVLNQQLGQLSVSGHDNTLNLTDVDRVDIQGNKNLVLARAVKQVRFSGNDNTVNPSSKPVLDDRG SGNKVM
Sequences:
>Translated_166_residues MRVTHTALTLLTLGSVLALSGCGGDGPAAQAPSAVSNTLTDPASGADCAGKDVRLTRNDSEWILHGECGTVTITASRGAM NLDTARSIRLEGSNFTVLNQQLGQLSVSGHDNTLNLTDVDRVDIQGNKNLVLARAVKQVRFSGNDNTVNPSSKPVLDDRG SGNKVM >Mature_166_residues MRVTHTALTLLTLGSVLALSGCGGDGPAAQAPSAVSNTLTDPASGADCAGKDVRLTRNDSEWILHGECGTVTITASRGAM NLDTARSIRLEGSNFTVLNQQLGQLSVSGHDNTLNLTDVDRVDIQGNKNLVLARAVKQVRFSGNDNTVNPSSKPVLDDRG SGNKVM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17315; Mature: 17315
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVTHTALTLLTLGSVLALSGCGGDGPAAQAPSAVSNTLTDPASGADCAGKDVRLTRNDS CCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCC EWILHGECGTVTITASRGAMNLDTARSIRLEGSNFTVLNQQLGQLSVSGHDNTLNLTDVD CEEEECCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCEEEECCCCCEEEECCCE RVDIQGNKNLVLARAVKQVRFSGNDNTVNPSSKPVLDDRGSGNKVM EEEECCCCCEEHEEHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRVTHTALTLLTLGSVLALSGCGGDGPAAQAPSAVSNTLTDPASGADCAGKDVRLTRNDS CCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCC EWILHGECGTVTITASRGAMNLDTARSIRLEGSNFTVLNQQLGQLSVSGHDNTLNLTDVD CEEEECCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCEEEECCCCCEEEECCCE RVDIQGNKNLVLARAVKQVRFSGNDNTVNPSSKPVLDDRGSGNKVM EEEECCCCCEEHEEHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA