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The map label for this gene is fliM [H]

Identifier: 78044874

GI number: 78044874

Start: 898341

End: 899348

Strand: Direct

Name: fliM [H]

Synonym: CHY_1019

Alternate gene names: 78044874

Gene position: 898341-899348 (Clockwise)

Preceding gene: 78042666

Following gene: 78043679

Centisome position: 37.41

GC content: 43.95

Gene sequence:

>1008_bases
TTGCCGGAGCTTGGTGATAGCAAAGAAATATTATCTCAAGAAGAAATAGACAGGTTATTAGCAGCTCTTGCTTCGGGAAA
TATTGATGAAGTTACCGAGAAGAAAAAAGAAGAAATCCGCTACCGCAAATATGATTTTCGTCGTCCCAACAAATTTTCCA
AGGAAAACCTGCGCACGCTTCATTTAATTCACGATAATTATGCCCGGTTAATTTCTAACTTTCTGACCGGCTATTTGCGG
ACTAATATTTCTGTGAAAGTAGCTTCGGTAGACCAGGCAACCTATGAAGATTTTTTGGTTTCGGTTCCTACCCCTACCCT
GATAACAACCTTTAAGCTTCATCCCCTGAAAGGCAGCATGGTGATGGAGACCAATTTGCAATTTATTTTCCCGATAATAA
GCCTTTTATTTGGTGGGAGCGGTGATATGCCGCCGGAAGTTCGGGAACTTACCGATATCGAGCTGGCGGTGATTAAAAAG
CTCAACTACCGGCTTTTGGAAAACCTGGCCCAGGCCTGGGCGGAAATTATCAAGGTCGAGCCGGAGATCGAGGCTTTAGA
AAACAACCCAAGATTACATCAGGTACTTTCCCCCAATGAAATTGTCGCGATAATTACGTTTACTACTGAAATTTTAGGAA
ACAATGGTTTAATTAATCTTTGCCTTCCTTTTGAAGTTTTGGATCCGTTACTGGCAAAGCTATCGGCCAGCTACTGGTTT
TCCCATGCCACTGCTGCCGACCGGGAAGCTTTTGCCCGGCACATGGAAGGTTTTTTAGCGGAAAGTGAGCTGGAAGTATC
TGCTATTTTAGGGGGGACCGAACTGCGGGTGCGGGAATTTTTGAAAATTGAGGTTGGGGATATAGTGGTTTTGAATCGGA
AGGTTGATGAGGAATTGGAACTTTTTGTCGAAGACCAAAAACTGTTTAAGGTGCAACCCGGTCGTGTAGGGGAGAAACTT
TGTTGCCAGATAACTGGGATGATAGAGAGGGATGAAGCCGATGGATAA

Upstream 100 bases:

>100_bases
CGGGGGCTATCGACTTTATTGTAAAGCCTTTCCAGCAGGACAGGATTTTACAAGCCTTTGAGAAAACTTTGAAGAGGTAA
TGGTGAAAGGCGGGATATAA

Downstream 100 bases:

>100_bases
CCAGTTTTTAAGCCAAGAAGAGATTGATGCTCTTTTAAGAAGCGAGCCAGTTCCTTCCGAATCGGAAGGAAGCGGCACCG
GAATTATCCTAACCGATGCG

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MPELGDSKEILSQEEIDRLLAALASGNIDEVTEKKKEEIRYRKYDFRRPNKFSKENLRTLHLIHDNYARLISNFLTGYLR
TNISVKVASVDQATYEDFLVSVPTPTLITTFKLHPLKGSMVMETNLQFIFPIISLLFGGSGDMPPEVRELTDIELAVIKK
LNYRLLENLAQAWAEIIKVEPEIEALENNPRLHQVLSPNEIVAIITFTTEILGNNGLINLCLPFEVLDPLLAKLSASYWF
SHATAADREAFARHMEGFLAESELEVSAILGGTELRVREFLKIEVGDIVVLNRKVDEELELFVEDQKLFKVQPGRVGEKL
CCQITGMIERDEADG

Sequences:

>Translated_335_residues
MPELGDSKEILSQEEIDRLLAALASGNIDEVTEKKKEEIRYRKYDFRRPNKFSKENLRTLHLIHDNYARLISNFLTGYLR
TNISVKVASVDQATYEDFLVSVPTPTLITTFKLHPLKGSMVMETNLQFIFPIISLLFGGSGDMPPEVRELTDIELAVIKK
LNYRLLENLAQAWAEIIKVEPEIEALENNPRLHQVLSPNEIVAIITFTTEILGNNGLINLCLPFEVLDPLLAKLSASYWF
SHATAADREAFARHMEGFLAESELEVSAILGGTELRVREFLKIEVGDIVVLNRKVDEELELFVEDQKLFKVQPGRVGEKL
CCQITGMIERDEADG
>Mature_334_residues
PELGDSKEILSQEEIDRLLAALASGNIDEVTEKKKEEIRYRKYDFRRPNKFSKENLRTLHLIHDNYARLISNFLTGYLRT
NISVKVASVDQATYEDFLVSVPTPTLITTFKLHPLKGSMVMETNLQFIFPIISLLFGGSGDMPPEVRELTDIELAVIKKL
NYRLLENLAQAWAEIIKVEPEIEALENNPRLHQVLSPNEIVAIITFTTEILGNNGLINLCLPFEVLDPLLAKLSASYWFS
HATAADREAFARHMEGFLAESELEVSAILGGTELRVREFLKIEVGDIVVLNRKVDEELELFVEDQKLFKVQPGRVGEKLC
CQITGMIERDEADG

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=292, Percent_Identity=31.1643835616438, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 37960; Mature: 37829

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPELGDSKEILSQEEIDRLLAALASGNIDEVTEKKKEEIRYRKYDFRRPNKFSKENLRTL
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
HLIHDNYARLISNFLTGYLRTNISVKVASVDQATYEDFLVSVPTPTLITTFKLHPLKGSM
EEEHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHEEECCCCCEEEEEEEECCCCCE
VMETNLQFIFPIISLLFGGSGDMPPEVRELTDIELAVIKKLNYRLLENLAQAWAEIIKVE
EEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEIEALENNPRLHQVLSPNEIVAIITFTTEILGNNGLINLCLPFEVLDPLLAKLSASYWF
CCHHHHCCCCCEEEECCCCCEEEEEEEEHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHH
SHATAADREAFARHMEGFLAESELEVSAILGGTELRVREFLKIEVGDIVVLNRKVDEELE
HHCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHEEEECCEEEEECCCCHHHH
LFVEDQKLFKVQPGRVGEKLCCQITGMIERDEADG
HHHCCCHHEEECCCCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PELGDSKEILSQEEIDRLLAALASGNIDEVTEKKKEEIRYRKYDFRRPNKFSKENLRTL
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
HLIHDNYARLISNFLTGYLRTNISVKVASVDQATYEDFLVSVPTPTLITTFKLHPLKGSM
EEEHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHEEECCCCCEEEEEEEECCCCCE
VMETNLQFIFPIISLLFGGSGDMPPEVRELTDIELAVIKKLNYRLLENLAQAWAEIIKVE
EEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEIEALENNPRLHQVLSPNEIVAIITFTTEILGNNGLINLCLPFEVLDPLLAKLSASYWF
CCHHHHCCCCCEEEECCCCCEEEEEEEEHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHH
SHATAADREAFARHMEGFLAESELEVSAILGGTELRVREFLKIEVGDIVVLNRKVDEELE
HHCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHEEEECCEEEEECCCCHHHH
LFVEDQKLFKVQPGRVGEKLCCQITGMIERDEADG
HHHCCCHHEEECCCCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8755894; 9665876; 8529894 [H]