Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
---|---|
Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is cheY [H]
Identifier: 78042666
GI number: 78042666
Start: 897955
End: 898320
Strand: Direct
Name: cheY [H]
Synonym: CHY_1018
Alternate gene names: 78042666
Gene position: 897955-898320 (Clockwise)
Preceding gene: 78043449
Following gene: 78044874
Centisome position: 37.39
GC content: 42.9
Gene sequence:
>366_bases ATGTCAGCACGTGTATTAATTGTGGATGATGCAGCTTTTATGCGGATGATGATTAAAAATATTTTAGTAAAAAACGGTTA TGAAGTTGTGGGCGAAGCGGAAAACGGTGCCCAGGCGGTGGAAATGTATAAAGAGCTCAAACCGGATGTCGTAACGATGG ATATTACCATGCCGGAGATGGATGGTATTCAAGCGGTGCGCGAAATTAAAAAAATTGACCCCAATGCTAAAATTATAATG TGCAGTGCCATGGGGCAGCAAGCGCTGGTAATGGAAGCGATTCAAGCGGGGGCTATCGACTTTATTGTAAAGCCTTTCCA GCAGGACAGGATTTTACAAGCCTTTGAGAAAACTTTGAAGAGGTAA
Upstream 100 bases:
>100_bases AGGACACTTTTTCTTTGTTCCTAAGCCCGGTTCGCTTCAAAAGATTTTTGCGGCCTTAGGCCTTAGCTAAATATTCTAAA TTCATACAGGAGGGAAATGA
Downstream 100 bases:
>100_bases TGGTGAAAGGCGGGATATAATTGCCGGAGCTTGGTGATAGCAAAGAAATATTATCTCAAGAAGAAATAGACAGGTTATTA GCAGCTCTTGCTTCGGGAAA
Product: chemotaxis response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSARVLIVDDAAFMRMMIKNILVKNGYEVVGEAENGAQAVEMYKELKPDVVTMDITMPEMDGIQAVREIKKIDPNAKIIM CSAMGQQALVMEAIQAGAIDFIVKPFQQDRILQAFEKTLKR
Sequences:
>Translated_121_residues MSARVLIVDDAAFMRMMIKNILVKNGYEVVGEAENGAQAVEMYKELKPDVVTMDITMPEMDGIQAVREIKKIDPNAKIIM CSAMGQQALVMEAIQAGAIDFIVKPFQQDRILQAFEKTLKR >Mature_120_residues SARVLIVDDAAFMRMMIKNILVKNGYEVVGEAENGAQAVEMYKELKPDVVTMDITMPEMDGIQAVREIKKIDPNAKIIMC SAMGQQALVMEAIQAGAIDFIVKPFQQDRILQAFEKTLKR
Specific function: Has a central controlling role in chemotaxis. Although it is homologous to the CheY protein of other bacteria, it is thought to function in a different manner [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=37.962962962963, Blast_Score=89, Evalue=7e-20, Organism=Escherichia coli, GI1786599, Length=123, Percent_Identity=30.0813008130081, Blast_Score=70, Evalue=4e-14, Organism=Escherichia coli, GI1790437, Length=115, Percent_Identity=33.9130434782609, Blast_Score=70, Evalue=4e-14, Organism=Escherichia coli, GI1788905, Length=119, Percent_Identity=34.453781512605, Blast_Score=70, Evalue=5e-14, Organism=Escherichia coli, GI1788192, Length=104, Percent_Identity=34.6153846153846, Blast_Score=70, Evalue=5e-14, Organism=Escherichia coli, GI1788222, Length=101, Percent_Identity=38.6138613861386, Blast_Score=66, Evalue=7e-13, Organism=Escherichia coli, GI1788712, Length=111, Percent_Identity=32.4324324324324, Blast_Score=66, Evalue=8e-13, Organism=Escherichia coli, GI1790299, Length=115, Percent_Identity=32.1739130434783, Blast_Score=65, Evalue=9e-13, Organism=Escherichia coli, GI1788191, Length=120, Percent_Identity=30.8333333333333, Blast_Score=64, Evalue=3e-12, Organism=Escherichia coli, GI1787375, Length=118, Percent_Identity=27.9661016949153, Blast_Score=64, Evalue=4e-12, Organism=Escherichia coli, GI87082052, Length=121, Percent_Identity=32.2314049586777, Blast_Score=61, Evalue=2e-11, Organism=Escherichia coli, GI1788521, Length=118, Percent_Identity=30.5084745762712, Blast_Score=60, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 13550; Mature: 13419
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 9.1 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 8.3 %Met (Mature Protein) 9.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARVLIVDDAAFMRMMIKNILVKNGYEVVGEAENGAQAVEMYKELKPDVVTMDITMPEM CCCEEEEEECHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCC DGIQAVREIKKIDPNAKIIMCSAMGQQALVMEAIQAGAIDFIVKPFQQDRILQAFEKTLK HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHC R C >Mature Secondary Structure SARVLIVDDAAFMRMMIKNILVKNGYEVVGEAENGAQAVEMYKELKPDVVTMDITMPEM CCEEEEEECHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCC DGIQAVREIKKIDPNAKIIMCSAMGQQALVMEAIQAGAIDFIVKPFQQDRILQAFEKTLK HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1905718; 9384377; 1447979; 1597417; 8755892 [H]