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The map label for this gene is dppC [H]

Identifier: 78044777

GI number: 78044777

Start: 1003961

End: 1004809

Strand: Direct

Name: dppC [H]

Synonym: CHY_1130

Alternate gene names: 78044777

Gene position: 1003961-1004809 (Clockwise)

Preceding gene: 78044226

Following gene: 78044536

Centisome position: 41.81

GC content: 43.58

Gene sequence:

>849_bases
ATGGGTAAATTTTGGGAAAAAGACTGGATAAAACGCCTTTTGCAGAATAAAGCGGCGGTGGTAGGTTTAATTATTGTCTT
ACTATTACTCTTTGCTGCAATTTTTGCTCCCGTGCTTGCTCCCTATGACCCGATAAAAGATGGAAGTTTACAAAATAGGT
TAAAACCTCCTTCTTCGGAGCATTTGCTTGGTACCGATAAGCTGGGTAGGGATATTTTAAGCCGCATAATTTTTGGAGCA
CGAATTTCGGTAGAAATTGGCGTGATTTCTGTAGGTTTGGCGTTAATCGTTGGTACGTTAATGGGTTTAATTGCCGGTTA
TTATGGTGGCTTACTTGACTCTTTTCTTATGCGGATTGTTGATATTATTTTAGCTTTTCCCAGCATTCTTTTGGCTATTG
CCATTACTTCGGTTTTGGGGCCCAGTTTAAATAACGCGATGATTGCTGTGGGAATTGTAATGGTACCAAGTTTTGCCCGG
GTAGTACGGTCTACGGTGTTAAGTTTAAAAGAAATGGAGTTTGTGGAAGCAGCCCGGGCGATTGGGGCCACTGATTTTAC
CATATTGTTTCGCCATATTTTACCAAACTCCATGGCGCCGATAATTGTTCAGGGTACCATGAATATTGGTACTGCAATAT
TGGATGCCGCGGGGCTTAGCTTTTTGGGGCTTGGTGCCCAGCCGCCAACCCCTGAGTGGGGTGCGATGCTGGTTGATGCC
CGGGAACTTTTAGTAAAAGCCCCTTGGGTTGCCTTCTTCCCGGGATTAGCGATTATGTTAAACGTTCTGGGCTTTAATCT
TTTAGGAGATGGTTTAAGAGATGCTCTGGATCCCCGATTAAAACAATAG

Upstream 100 bases:

>100_bases
ACAATTATCGCCTTAATTTTTGTTTTAATTAATTTAATTGTCGATATTTTATATACGGTAATAGACCCCCGAATCCGGTA
TCAGTAGCAGGAGGATAGCG

Downstream 100 bases:

>100_bases
GTTTTTAAGCTGCAATTCCTGCAGCTTTTTTTGTGCTATAATTAATTGAAAACAGGGAAGTTAAGGAGGGAAATTTTTGG
AAAATTATCAAAACCTTCTA

Product: oligopeptide/dipeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MGKFWEKDWIKRLLQNKAAVVGLIIVLLLLFAAIFAPVLAPYDPIKDGSLQNRLKPPSSEHLLGTDKLGRDILSRIIFGA
RISVEIGVISVGLALIVGTLMGLIAGYYGGLLDSFLMRIVDIILAFPSILLAIAITSVLGPSLNNAMIAVGIVMVPSFAR
VVRSTVLSLKEMEFVEAARAIGATDFTILFRHILPNSMAPIIVQGTMNIGTAILDAAGLSFLGLGAQPPTPEWGAMLVDA
RELLVKAPWVAFFPGLAIMLNVLGFNLLGDGLRDALDPRLKQ

Sequences:

>Translated_282_residues
MGKFWEKDWIKRLLQNKAAVVGLIIVLLLLFAAIFAPVLAPYDPIKDGSLQNRLKPPSSEHLLGTDKLGRDILSRIIFGA
RISVEIGVISVGLALIVGTLMGLIAGYYGGLLDSFLMRIVDIILAFPSILLAIAITSVLGPSLNNAMIAVGIVMVPSFAR
VVRSTVLSLKEMEFVEAARAIGATDFTILFRHILPNSMAPIIVQGTMNIGTAILDAAGLSFLGLGAQPPTPEWGAMLVDA
RELLVKAPWVAFFPGLAIMLNVLGFNLLGDGLRDALDPRLKQ
>Mature_281_residues
GKFWEKDWIKRLLQNKAAVVGLIIVLLLLFAAIFAPVLAPYDPIKDGSLQNRLKPPSSEHLLGTDKLGRDILSRIIFGAR
ISVEIGVISVGLALIVGTLMGLIAGYYGGLLDSFLMRIVDIILAFPSILLAIAITSVLGPSLNNAMIAVGIVMVPSFARV
VRSTVLSLKEMEFVEAARAIGATDFTILFRHILPNSMAPIIVQGTMNIGTAILDAAGLSFLGLGAQPPTPEWGAMLVDAR
ELLVKAPWVAFFPGLAIMLNVLGFNLLGDGLRDALDPRLKQ

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=277, Percent_Identity=54.1516245487365, Blast_Score=292, Evalue=1e-80,
Organism=Escherichia coli, GI1787760, Length=260, Percent_Identity=45, Blast_Score=241, Evalue=3e-65,
Organism=Escherichia coli, GI1789964, Length=289, Percent_Identity=51.2110726643599, Blast_Score=236, Evalue=1e-63,
Organism=Escherichia coli, GI1787549, Length=272, Percent_Identity=43.0147058823529, Blast_Score=184, Evalue=4e-48,
Organism=Escherichia coli, GI1789889, Length=240, Percent_Identity=42.0833333333333, Blast_Score=183, Evalue=9e-48,
Organism=Escherichia coli, GI1787498, Length=280, Percent_Identity=38.5714285714286, Blast_Score=175, Evalue=3e-45,
Organism=Escherichia coli, GI1788505, Length=277, Percent_Identity=30.3249097472924, Blast_Score=132, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30235; Mature: 30104

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKFWEKDWIKRLLQNKAAVVGLIIVLLLLFAAIFAPVLAPYDPIKDGSLQNRLKPPSSE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCC
HLLGTDKLGRDILSRIIFGARISVEIGVISVGLALIVGTLMGLIAGYYGGLLDSFLMRIV
CCCCHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIILAFPSILLAIAITSVLGPSLNNAMIAVGIVMVPSFARVVRSTVLSLKEMEFVEAARA
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGATDFTILFRHILPNSMAPIIVQGTMNIGTAILDAAGLSFLGLGAQPPTPEWGAMLVDA
HCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHH
RELLVKAPWVAFFPGLAIMLNVLGFNLLGDGLRDALDPRLKQ
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GKFWEKDWIKRLLQNKAAVVGLIIVLLLLFAAIFAPVLAPYDPIKDGSLQNRLKPPSSE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCC
HLLGTDKLGRDILSRIIFGARISVEIGVISVGLALIVGTLMGLIAGYYGGLLDSFLMRIV
CCCCHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIILAFPSILLAIAITSVLGPSLNNAMIAVGIVMVPSFARVVRSTVLSLKEMEFVEAARA
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGATDFTILFRHILPNSMAPIIVQGTMNIGTAILDAAGLSFLGLGAQPPTPEWGAMLVDA
HCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHH
RELLVKAPWVAFFPGLAIMLNVLGFNLLGDGLRDALDPRLKQ
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]