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The map label for this gene is dctR [H]

Identifier: 78044540

GI number: 78044540

Start: 998499

End: 999116

Strand: Direct

Name: dctR [H]

Synonym: CHY_1125

Alternate gene names: 78044540

Gene position: 998499-999116 (Clockwise)

Preceding gene: 78045086

Following gene: 78043619

Centisome position: 41.58

GC content: 41.26

Gene sequence:

>618_bases
GTGAGAGTACTCATAATTGATGACGATGAAGGCATTCGCTACACTGTGGGGGAAATTATTGCCTTTATGGGCTGGGAAGC
GATTAAAGCGGAAAACGGAGCAATAGGCATTGAAAAATTTGTGCGGGAAAAGCCGGATATGGTGCTGGTGGATTATCACA
TGCCAGCGTTAGATGGGTTGGATACGGTGGAAAGGATTCGGGAAATTGATCAAGGGGTTCCGATAATTGTTCTGACAGTA
GATGAACGTCAACAAATTGCCGATAAATTTTTGGAAGTGGGAGCTTCTGACTTTGCTTTAAAACCAATTAAGGCACCGGA
TTTAATTGCAAGGCTAAAAGTACATGCGCGCATGATTGAGATAAATCGCTCGCAGGAGAAAAAAGATCAGGATGGATTTT
TGGCCAAGGGAATTAATAAAAAAACCTTCAATTTAATTGTAGAGTATCTTAAAGAGCAAAAGGAACCGCAAACCATAGAG
GAAATTACTGAAGGAGTGGGCCTTGCCTACCCAACAGTACACCGGTATTTACTGTATATGGTAAATGAAGGTATAGTGAG
TATCGAGTGTGACTACGGTCGCATTGGCCGTCCCAAGAATAAATATAAATTAGTATAA

Upstream 100 bases:

>100_bases
GTTAAAAGAGTGGTGGAAAACCATAACGGTTATATTCAGCTTCACTCGGAAGTAAATAAAGGAACTACGGTAAAAATATT
TTTACCTTTGGGGGGATATG

Downstream 100 bases:

>100_bases
ATTTCGGGACAGTCCCTAAAATTATACTTAAAGTATAAAAAAGGGGACTGTCCCTTTTTGTATACAATGAGAAATATGAG
AAAAAATAGAAAATTATTTA

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MRVLIIDDDEGIRYTVGEIIAFMGWEAIKAENGAIGIEKFVREKPDMVLVDYHMPALDGLDTVERIREIDQGVPIIVLTV
DERQQIADKFLEVGASDFALKPIKAPDLIARLKVHARMIEINRSQEKKDQDGFLAKGINKKTFNLIVEYLKEQKEPQTIE
EITEGVGLAYPTVHRYLLYMVNEGIVSIECDYGRIGRPKNKYKLV

Sequences:

>Translated_205_residues
MRVLIIDDDEGIRYTVGEIIAFMGWEAIKAENGAIGIEKFVREKPDMVLVDYHMPALDGLDTVERIREIDQGVPIIVLTV
DERQQIADKFLEVGASDFALKPIKAPDLIARLKVHARMIEINRSQEKKDQDGFLAKGINKKTFNLIVEYLKEQKEPQTIE
EITEGVGLAYPTVHRYLLYMVNEGIVSIECDYGRIGRPKNKYKLV
>Mature_205_residues
MRVLIIDDDEGIRYTVGEIIAFMGWEAIKAENGAIGIEKFVREKPDMVLVDYHMPALDGLDTVERIREIDQGVPIIVLTV
DERQQIADKFLEVGASDFALKPIKAPDLIARLKVHARMIEINRSQEKKDQDGFLAKGINKKTFNLIVEYLKEQKEPQTIE
EITEGVGLAYPTVHRYLLYMVNEGIVSIECDYGRIGRPKNKYKLV

Specific function: Member of the two-component regulatory system dctS/dctR. Essential for expression of dctP [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=31.7757009345794, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1790299, Length=108, Percent_Identity=30.5555555555556, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1786599, Length=120, Percent_Identity=25.8333333333333, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1787375, Length=117, Percent_Identity=31.6239316239316, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23376; Mature: 23376

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLIIDDDEGIRYTVGEIIAFMGWEAIKAENGAIGIEKFVREKPDMVLVDYHMPALDGL
CEEEEEECCCCCEEHHHHHHHHHCHHHHCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCH
DTVERIREIDQGVPIIVLTVDERQQIADKFLEVGASDFALKPIKAPDLIARLKVHARMIE
HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHEE
INRSQEKKDQDGFLAKGINKKTFNLIVEYLKEQKEPQTIEEITEGVGLAYPTVHRYLLYM
CCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHH
VNEGIVSIECDYGRIGRPKNKYKLV
HCCCEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MRVLIIDDDEGIRYTVGEIIAFMGWEAIKAENGAIGIEKFVREKPDMVLVDYHMPALDGL
CEEEEEECCCCCEEHHHHHHHHHCHHHHCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCH
DTVERIREIDQGVPIIVLTVDERQQIADKFLEVGASDFALKPIKAPDLIARLKVHARMIE
HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHEE
INRSQEKKDQDGFLAKGINKKTFNLIVEYLKEQKEPQTIEEITEGVGLAYPTVHRYLLYM
CCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHH
VNEGIVSIECDYGRIGRPKNKYKLV
HCCCEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA