Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is 78044239

Identifier: 78044239

GI number: 78044239

Start: 1112594

End: 1113274

Strand: Direct

Name: 78044239

Synonym: CHY_2641

Alternate gene names: NA

Gene position: 1112594-1113274 (Clockwise)

Preceding gene: 78045058

Following gene: 78045016

Centisome position: 46.33

GC content: 44.2

Gene sequence:

>681_bases
ATGGCGAATAATTGGAGAAAAAATCTAAAGAAGGAGAAAAAGGAAAAGTCTTCGAGTAAGGTTTACGGAGCTGACACTCC
CCTTACCGAAGACTTTCCTCCATACCGTACTTTGATTGTAACTTATCTTGGAGCTTCAGTAAAGGAGTATTTAGAAAATT
ACTTAAATTTTTTGGAAGAAAACCAATGGTATTGCCCGGTTTGTAGTGCAAAGATGTCTTTTCACGGATGGTATCGACGA
AAAATAATAACCTTAGATGGAACTACTACTAGAATTCCAATAGCCCGCTATCGCTGTTCTAACTGCCGGAAAACCCATGC
CATTTTACCGGATTTTGTTGCGCCTTACCGCCATTATTCCCAGGTTTTGATTGCAGCTGTAGTTGAAGAAGTAGTTTCCA
AGCAGGTACCGCCAGAACGGGTCGAGGGCAATCAGGATATTCCCACTACTCGGCGATGGATACGCCGATTTCTAAAGCGA
TGTCATGAGGTTATAGGCGTTTTAGAAAGTATAGCTTTTAGATACACCGGGCAAATAAAATCGCTTCTAACGGAAGCACG
GTCGTCGCCCTGGGAGCAAATGCTTGCGGCTTTAGAACTACTGCCGGCGGTAAAAGCTACTTCGGTGTTTGGTGCGGTAA
ATCTCTGGCTGACCATGGACGTGGTCGGCCTCTGGCTTTAA

Upstream 100 bases:

>100_bases
GGAAACAGAAATGTACCCACTTCAGGTGTTTCTACTCACATAAAATAACCGTCCAATGCTCAGATTTCGTGGCCAAATAG
AAAAGGAATTTGTTTAGATA

Downstream 100 bases:

>100_bases
CTAATTTCACATAGTTTGGTCTCCTGGCCATTCTTGGGATTGTGGTATGGTGAATTTAACACCATATTTAAACAAGGAGA
TGGTCAGGTTGCCAAAGGAA

Product: ISChy3, orf1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MANNWRKNLKKEKKEKSSSKVYGADTPLTEDFPPYRTLIVTYLGASVKEYLENYLNFLEENQWYCPVCSAKMSFHGWYRR
KIITLDGTTTRIPIARYRCSNCRKTHAILPDFVAPYRHYSQVLIAAVVEEVVSKQVPPERVEGNQDIPTTRRWIRRFLKR
CHEVIGVLESIAFRYTGQIKSLLTEARSSPWEQMLAALELLPAVKATSVFGAVNLWLTMDVVGLWL

Sequences:

>Translated_226_residues
MANNWRKNLKKEKKEKSSSKVYGADTPLTEDFPPYRTLIVTYLGASVKEYLENYLNFLEENQWYCPVCSAKMSFHGWYRR
KIITLDGTTTRIPIARYRCSNCRKTHAILPDFVAPYRHYSQVLIAAVVEEVVSKQVPPERVEGNQDIPTTRRWIRRFLKR
CHEVIGVLESIAFRYTGQIKSLLTEARSSPWEQMLAALELLPAVKATSVFGAVNLWLTMDVVGLWL
>Mature_225_residues
ANNWRKNLKKEKKEKSSSKVYGADTPLTEDFPPYRTLIVTYLGASVKEYLENYLNFLEENQWYCPVCSAKMSFHGWYRRK
IITLDGTTTRIPIARYRCSNCRKTHAILPDFVAPYRHYSQVLIAAVVEEVVSKQVPPERVEGNQDIPTTRRWIRRFLKRC
HEVIGVLESIAFRYTGQIKSLLTEARSSPWEQMLAALELLPAVKATSVFGAVNLWLTMDVVGLWL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26149; Mature: 26017

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANNWRKNLKKEKKEKSSSKVYGADTPLTEDFPPYRTLIVTYLGASVKEYLENYLNFLEE
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NQWYCPVCSAKMSFHGWYRRKIITLDGTTTRIPIARYRCSNCRKTHAILPDFVAPYRHYS
CCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHCCHHHHHHCHHHHHHHHHHH
QVLIAAVVEEVVSKQVPPERVEGNQDIPTTRRWIRRFLKRCHEVIGVLESIAFRYTGQIK
HHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLTEARSSPWEQMLAALELLPAVKATSVFGAVNLWLTMDVVGLWL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ANNWRKNLKKEKKEKSSSKVYGADTPLTEDFPPYRTLIVTYLGASVKEYLENYLNFLEE
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NQWYCPVCSAKMSFHGWYRRKIITLDGTTTRIPIARYRCSNCRKTHAILPDFVAPYRHYS
CCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHCCHHHHHHCHHHHHHHHHHH
QVLIAAVVEEVVSKQVPPERVEGNQDIPTTRRWIRRFLKRCHEVIGVLESIAFRYTGQIK
HHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLTEARSSPWEQMLAALELLPAVKATSVFGAVNLWLTMDVVGLWL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA