Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is 78044239
Identifier: 78044239
GI number: 78044239
Start: 1112594
End: 1113274
Strand: Direct
Name: 78044239
Synonym: CHY_2641
Alternate gene names: NA
Gene position: 1112594-1113274 (Clockwise)
Preceding gene: 78045058
Following gene: 78045016
Centisome position: 46.33
GC content: 44.2
Gene sequence:
>681_bases ATGGCGAATAATTGGAGAAAAAATCTAAAGAAGGAGAAAAAGGAAAAGTCTTCGAGTAAGGTTTACGGAGCTGACACTCC CCTTACCGAAGACTTTCCTCCATACCGTACTTTGATTGTAACTTATCTTGGAGCTTCAGTAAAGGAGTATTTAGAAAATT ACTTAAATTTTTTGGAAGAAAACCAATGGTATTGCCCGGTTTGTAGTGCAAAGATGTCTTTTCACGGATGGTATCGACGA AAAATAATAACCTTAGATGGAACTACTACTAGAATTCCAATAGCCCGCTATCGCTGTTCTAACTGCCGGAAAACCCATGC CATTTTACCGGATTTTGTTGCGCCTTACCGCCATTATTCCCAGGTTTTGATTGCAGCTGTAGTTGAAGAAGTAGTTTCCA AGCAGGTACCGCCAGAACGGGTCGAGGGCAATCAGGATATTCCCACTACTCGGCGATGGATACGCCGATTTCTAAAGCGA TGTCATGAGGTTATAGGCGTTTTAGAAAGTATAGCTTTTAGATACACCGGGCAAATAAAATCGCTTCTAACGGAAGCACG GTCGTCGCCCTGGGAGCAAATGCTTGCGGCTTTAGAACTACTGCCGGCGGTAAAAGCTACTTCGGTGTTTGGTGCGGTAA ATCTCTGGCTGACCATGGACGTGGTCGGCCTCTGGCTTTAA
Upstream 100 bases:
>100_bases GGAAACAGAAATGTACCCACTTCAGGTGTTTCTACTCACATAAAATAACCGTCCAATGCTCAGATTTCGTGGCCAAATAG AAAAGGAATTTGTTTAGATA
Downstream 100 bases:
>100_bases CTAATTTCACATAGTTTGGTCTCCTGGCCATTCTTGGGATTGTGGTATGGTGAATTTAACACCATATTTAAACAAGGAGA TGGTCAGGTTGCCAAAGGAA
Product: ISChy3, orf1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MANNWRKNLKKEKKEKSSSKVYGADTPLTEDFPPYRTLIVTYLGASVKEYLENYLNFLEENQWYCPVCSAKMSFHGWYRR KIITLDGTTTRIPIARYRCSNCRKTHAILPDFVAPYRHYSQVLIAAVVEEVVSKQVPPERVEGNQDIPTTRRWIRRFLKR CHEVIGVLESIAFRYTGQIKSLLTEARSSPWEQMLAALELLPAVKATSVFGAVNLWLTMDVVGLWL
Sequences:
>Translated_226_residues MANNWRKNLKKEKKEKSSSKVYGADTPLTEDFPPYRTLIVTYLGASVKEYLENYLNFLEENQWYCPVCSAKMSFHGWYRR KIITLDGTTTRIPIARYRCSNCRKTHAILPDFVAPYRHYSQVLIAAVVEEVVSKQVPPERVEGNQDIPTTRRWIRRFLKR CHEVIGVLESIAFRYTGQIKSLLTEARSSPWEQMLAALELLPAVKATSVFGAVNLWLTMDVVGLWL >Mature_225_residues ANNWRKNLKKEKKEKSSSKVYGADTPLTEDFPPYRTLIVTYLGASVKEYLENYLNFLEENQWYCPVCSAKMSFHGWYRRK IITLDGTTTRIPIARYRCSNCRKTHAILPDFVAPYRHYSQVLIAAVVEEVVSKQVPPERVEGNQDIPTTRRWIRRFLKRC HEVIGVLESIAFRYTGQIKSLLTEARSSPWEQMLAALELLPAVKATSVFGAVNLWLTMDVVGLWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26149; Mature: 26017
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANNWRKNLKKEKKEKSSSKVYGADTPLTEDFPPYRTLIVTYLGASVKEYLENYLNFLEE CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC NQWYCPVCSAKMSFHGWYRRKIITLDGTTTRIPIARYRCSNCRKTHAILPDFVAPYRHYS CCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHCCHHHHHHCHHHHHHHHHHH QVLIAAVVEEVVSKQVPPERVEGNQDIPTTRRWIRRFLKRCHEVIGVLESIAFRYTGQIK HHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLLTEARSSPWEQMLAALELLPAVKATSVFGAVNLWLTMDVVGLWL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ANNWRKNLKKEKKEKSSSKVYGADTPLTEDFPPYRTLIVTYLGASVKEYLENYLNFLEE CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC NQWYCPVCSAKMSFHGWYRRKIITLDGTTTRIPIARYRCSNCRKTHAILPDFVAPYRHYS CCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHCCHHHHHHCHHHHHHHHHHH QVLIAAVVEEVVSKQVPPERVEGNQDIPTTRRWIRRFLKRCHEVIGVLESIAFRYTGQIK HHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLLTEARSSPWEQMLAALELLPAVKATSVFGAVNLWLTMDVVGLWL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA