Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is 78044064
Identifier: 78044064
GI number: 78044064
Start: 986941
End: 987237
Strand: Direct
Name: 78044064
Synonym: CHY_1111
Alternate gene names: NA
Gene position: 986941-987237 (Clockwise)
Preceding gene: 78043251
Following gene: 78044405
Centisome position: 41.1
GC content: 41.75
Gene sequence:
>297_bases ATGAATTTCGGTTTACCTGAACATATTTTAAACGCTTTAATCAAAGAGTTGCAAAAAAGGGAAAATGTAATTAGAGCGGT CATTTTTGGATCCCGCGCCCGGGGGGATTATAAGTATAATTCTGATATAGACCTTGCGGTTTACTGCGAGGGCAGGATGC CATCGGGGTTATGGTCAGACTTAGATGAGGCAGCGGGTATTTACAAGATTGATGTTATAGATATGAATAGCCCGTTAGAT GAAAAGTTTCGGCAGAGGATTGAGGAGCAGGGTATAGAGATTTACCGGAGAGAATAG
Upstream 100 bases:
>100_bases CTTATGACGAGCAAATGGCCAAAGAAATCTATGATAAAGTTAAAAAAAGGTATTATGACGCTTTTGCAGCATTTGCTAAG AAGATGGCGGAGGTGCTTAA
Downstream 100 bases:
>100_bases AAAGTTTAATTCAGGAGGATTTATGGAAGAAATTTTAGAAATAATTGACCTTACCGAAGAAGGACTGGGTGTTGGGAAAA AAGAAAAGCGGGTTTACTTT
Product: nucleotidyltransferase domain-containing protein
Products: NA
Alternate protein names: DNA Polymerase Beta Subunit; DNA Polymerase Beta Domain-Containing Protein Region; Nucleotidyltransferase Domain-Containing Protein
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MNFGLPEHILNALIKELQKRENVIRAVIFGSRARGDYKYNSDIDLAVYCEGRMPSGLWSDLDEAAGIYKIDVIDMNSPLD EKFRQRIEEQGIEIYRRE
Sequences:
>Translated_98_residues MNFGLPEHILNALIKELQKRENVIRAVIFGSRARGDYKYNSDIDLAVYCEGRMPSGLWSDLDEAAGIYKIDVIDMNSPLD EKFRQRIEEQGIEIYRRE >Mature_98_residues MNFGLPEHILNALIKELQKRENVIRAVIFGSRARGDYKYNSDIDLAVYCEGRMPSGLWSDLDEAAGIYKIDVIDMNSPLD EKFRQRIEEQGIEIYRRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11408; Mature: 11408
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFGLPEHILNALIKELQKRENVIRAVIFGSRARGDYKYNSDIDLAVYCEGRMPSGLWSD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHH LDEAAGIYKIDVIDMNSPLDEKFRQRIEEQGIEIYRRE HHHCCCEEEEEEEECCCCHHHHHHHHHHHCCHHEEECC >Mature Secondary Structure MNFGLPEHILNALIKELQKRENVIRAVIFGSRARGDYKYNSDIDLAVYCEGRMPSGLWSD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHH LDEAAGIYKIDVIDMNSPLDEKFRQRIEEQGIEIYRRE HHHCCCEEEEEEEECCCCHHHHHHHHHHHCCHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA