Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is 78043251
Identifier: 78043251
GI number: 78043251
Start: 986546
End: 986944
Strand: Direct
Name: 78043251
Synonym: CHY_1110
Alternate gene names: NA
Gene position: 986546-986944 (Clockwise)
Preceding gene: 78044990
Following gene: 78044064
Centisome position: 41.08
GC content: 38.6
Gene sequence:
>399_bases GTGAATAGCGAACGGTTAATGGAGAAATTTAATGAATATAAGAAGGCTGTTGTAAGACTTAAAGAAGCGTTGGAAGAAGA TTTAACAAATCCTTTAGTTTATGATGGCGTAATTCAGCGTTTTGAGTTTACCTATGAACTGGCTTGGAAGTTGATGAAGG CCTATCTTGAGTATGAGGGGTATGCAACTGTAAACTCGCCGCGAGCAGCCTTTAAAGAAGCTTTTGCCTATGGACTTATT TTTGATGGGGATGTCTGGATTGATATGATCGATGCTCGAAATCTTACTGTGCACTCTTATGACGAGCAAATGGCCAAAGA AATCTATGATAAAGTTAAAAAAAGGTATTATGACGCTTTTGCAGCATTTGCTAAGAAGATGGCGGAGGTGCTTAAATGA
Upstream 100 bases:
>100_bases TTTAATCTTCGCAAAGGCACGCCAAGTTATCAAGAACCCTTAACCTAATTTTTCGGCTCGGGTTCTATGGTAATTTAAAT TATACGAGGGAGGTTAAATA
Downstream 100 bases:
>100_bases ATTTCGGTTTACCTGAACATATTTTAAACGCTTTAATCAAAGAGTTGCAAAAAAGGGAAAATGTAATTAGAGCGGTCATT TTTGGATCCCGCGCCCGGGG
Product: nucleotidyltransferase substrate-binding protein
Products: NA
Alternate protein names: Xin-Antitoxin System Antitoxin Component; Nucleotidyltransferase Domain-Containing Protein; Nucleotidyltransferase Fused Substrate-Bimding Domain
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MNSERLMEKFNEYKKAVVRLKEALEEDLTNPLVYDGVIQRFEFTYELAWKLMKAYLEYEGYATVNSPRAAFKEAFAYGLI FDGDVWIDMIDARNLTVHSYDEQMAKEIYDKVKKRYYDAFAAFAKKMAEVLK
Sequences:
>Translated_132_residues MNSERLMEKFNEYKKAVVRLKEALEEDLTNPLVYDGVIQRFEFTYELAWKLMKAYLEYEGYATVNSPRAAFKEAFAYGLI FDGDVWIDMIDARNLTVHSYDEQMAKEIYDKVKKRYYDAFAAFAKKMAEVLK >Mature_132_residues MNSERLMEKFNEYKKAVVRLKEALEEDLTNPLVYDGVIQRFEFTYELAWKLMKAYLEYEGYATVNSPRAAFKEAFAYGLI FDGDVWIDMIDARNLTVHSYDEQMAKEIYDKVKKRYYDAFAAFAKKMAEVLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15617; Mature: 15617
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00050 RIBOSOMAL_L23
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSERLMEKFNEYKKAVVRLKEALEEDLTNPLVYDGVIQRFEFTYELAWKLMKAYLEYEG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YATVNSPRAAFKEAFAYGLIFDGDVWIDMIDARNLTVHSYDEQMAKEIYDKVKKRYYDAF CCCCCCHHHHHHHHHHHHCEECCCHHEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHH AAFAKKMAEVLK HHHHHHHHHHHC >Mature Secondary Structure MNSERLMEKFNEYKKAVVRLKEALEEDLTNPLVYDGVIQRFEFTYELAWKLMKAYLEYEG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YATVNSPRAAFKEAFAYGLIFDGDVWIDMIDARNLTVHSYDEQMAKEIYDKVKKRYYDAF CCCCCCHHHHHHHHHHHHCEECCCHHEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHH AAFAKKMAEVLK HHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA