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The map label for this gene is flgB [H]

Identifier: 78043872

GI number: 78043872

Start: 875816

End: 876226

Strand: Direct

Name: flgB [H]

Synonym: CHY_0990

Alternate gene names: 78043872

Gene position: 875816-876226 (Clockwise)

Preceding gene: 78044102

Following gene: 78042758

Centisome position: 36.47

GC content: 42.09

Gene sequence:

>411_bases
ATGGACCTTTTTGGAGGGGTTACCTACAACCTTTTGAAACTGGGGATTGATGCTGCAACAATCCGCCAGCAGGCGATTGC
CCATAACATTGCCAACGTCAATACTCCAGGATACCGGAAGGAAGTAGTGGTGTTTGAGGAAAAGGTTCAGGAATTTTTAA
ACCAAAAAAAAGGTAATTTTTCTTTAAAAACTACCCATCCTCGCCATCTAACGGCCAAAGGGTTCAGTTTACCTTTTGCA
GAAATTAAGCGAGAAAATTCTACTGCCATGAGAATTGACAAGAATAACGTGGACATCGAAACGGAAATGGTAGATTTGGC
ATATAACCAGCTTTATTATGAAACGGCTGTGGAGCGGTTAAAAGGCACCCTTGCTTCTTTAGAAATGGTGATTACCGGTG
GAAGGAGGTAA

Upstream 100 bases:

>100_bases
TTTTTTTTGGAAAAAGTTAAAATAAAATCGAGAAGGTAAAGGAATTTAGCTAATTTTGTCAAATATATTATAGAAAGTTA
TGAAAAAAGGGGAGAAGCGC

Downstream 100 bases:

>100_bases
GTGTAGATGGCATTTTTTAGTTCTTTCCAAATAACCGCTTCGGCCCTTACCGCCCACCGTTTATGGCTGGATACGATAGT
TGATAACATTGCCAATGCCA

Product: flagellar basal-body rod protein FlgB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MDLFGGVTYNLLKLGIDAATIRQQAIAHNIANVNTPGYRKEVVVFEEKVQEFLNQKKGNFSLKTTHPRHLTAKGFSLPFA
EIKRENSTAMRIDKNNVDIETEMVDLAYNQLYYETAVERLKGTLASLEMVITGGRR

Sequences:

>Translated_136_residues
MDLFGGVTYNLLKLGIDAATIRQQAIAHNIANVNTPGYRKEVVVFEEKVQEFLNQKKGNFSLKTTHPRHLTAKGFSLPFA
EIKRENSTAMRIDKNNVDIETEMVDLAYNQLYYETAVERLKGTLASLEMVITGGRR
>Mature_136_residues
MDLFGGVTYNLLKLGIDAATIRQQAIAHNIANVNTPGYRKEVVVFEEKVQEFLNQKKGNFSLKTTHPRHLTAKGFSLPFA
EIKRENSTAMRIDKNNVDIETEMVDLAYNQLYYETAVERLKGTLASLEMVITGGRR

Specific function: Unknown

COG id: COG1815

COG function: function code N; Flagellar basal body protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787313, Length=116, Percent_Identity=28.448275862069, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006300 [H]

Pfam domain/function: PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15377; Mature: 15377

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLFGGVTYNLLKLGIDAATIRQQAIAHNIANVNTPGYRKEVVVFEEKVQEFLNQKKGNF
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCE
SLKTTHPRHLTAKGFSLPFAEIKRENSTAMRIDKNNVDIETEMVDLAYNQLYYETAVERL
EEEECCCCEEECCCCCCCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
KGTLASLEMVITGGRR
HHHHHHHHHEEECCCC
>Mature Secondary Structure
MDLFGGVTYNLLKLGIDAATIRQQAIAHNIANVNTPGYRKEVVVFEEKVQEFLNQKKGNF
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCE
SLKTTHPRHLTAKGFSLPFAEIKRENSTAMRIDKNNVDIETEMVDLAYNQLYYETAVERL
EEEECCCCEEECCCCCCCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
KGTLASLEMVITGGRR
HHHHHHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1905667; 9384377 [H]