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The map label for this gene is flgC [H]

Identifier: 78042758

GI number: 78042758

Start: 876233

End: 876649

Strand: Direct

Name: flgC [H]

Synonym: CHY_0991

Alternate gene names: 78042758

Gene position: 876233-876649 (Clockwise)

Preceding gene: 78043872

Following gene: 78044773

Centisome position: 36.49

GC content: 47.24

Gene sequence:

>417_bases
ATGGCATTTTTTAGTTCTTTCCAAATAACCGCTTCGGCCCTTACCGCCCACCGTTTATGGCTGGATACGATAGTTGATAA
CATTGCCAATGCCAATACTACCCGGACGCCTGCAGGTGGTACCTACAATCGAAAAGACGTGATTTTTGAGGAAATCCTGG
AGGCAAAGGCCGGGTTTAAAGGCGGCGGGGTCAGGGTCAGTCAGATTGTAGAAGATACCAAAACTCCCTACCGCTATGTC
TTTAATCCTAACCATCCCGATGCGGATCCCAATACCGGTTTAGTAAAATATCCCAACGTTAATATCAACGATGAGATAGT
AAATTTACTGGCCGCTCAGAGGGCGTACGAAGCCAATGTTACGGTATTCAATACGGCTAAAGCCATGTATGCGAAGGCTC
TCGAGCTCAGCCGTTAG

Upstream 100 bases:

>100_bases
GGCATATAACCAGCTTTATTATGAAACGGCTGTGGAGCGGTTAAAAGGCACCCTTGCTTCTTTAGAAATGGTGATTACCG
GTGGAAGGAGGTAAGTGTAG

Downstream 100 bases:

>100_bases
GAGGGGTTAATGTGGAGATTACCGGCATTTCTTTTCCCAATATTATCCTACTTAATAACTCGGCACAATCAACAAAAACT
TTAGATTTTGAAAAGAAACT

Product: flagellar basal-body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MAFFSSFQITASALTAHRLWLDTIVDNIANANTTRTPAGGTYNRKDVIFEEILEAKAGFKGGGVRVSQIVEDTKTPYRYV
FNPNHPDADPNTGLVKYPNVNINDEIVNLLAAQRAYEANVTVFNTAKAMYAKALELSR

Sequences:

>Translated_138_residues
MAFFSSFQITASALTAHRLWLDTIVDNIANANTTRTPAGGTYNRKDVIFEEILEAKAGFKGGGVRVSQIVEDTKTPYRYV
FNPNHPDADPNTGLVKYPNVNINDEIVNLLAAQRAYEANVTVFNTAKAMYAKALELSR
>Mature_137_residues
AFFSSFQITASALTAHRLWLDTIVDNIANANTTRTPAGGTYNRKDVIFEEILEAKAGFKGGGVRVSQIVEDTKTPYRYVF
NPNHPDADPNTGLVKYPNVNINDEIVNLLAAQRAYEANVTVFNTAKAMYAKALELSR

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=138, Percent_Identity=40.5797101449275, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15242; Mature: 15111

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFFSSFQITASALTAHRLWLDTIVDNIANANTTRTPAGGTYNRKDVIFEEILEAKAGFK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
GGGVRVSQIVEDTKTPYRYVFNPNHPDADPNTGLVKYPNVNINDEIVNLLAAQRAYEANV
CCCEEHHHHHHHCCCCEEEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCE
TVFNTAKAMYAKALELSR
EEEEHHHHHHHHHHHCCC
>Mature Secondary Structure 
AFFSSFQITASALTAHRLWLDTIVDNIANANTTRTPAGGTYNRKDVIFEEILEAKAGFK
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
GGGVRVSQIVEDTKTPYRYVFNPNHPDADPNTGLVKYPNVNINDEIVNLLAAQRAYEANV
CCCEEHHHHHHHCCCCEEEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCE
TVFNTAKAMYAKALELSR
EEEEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]