Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is cheB2
Identifier: 78043599
GI number: 78043599
Start: 911897
End: 912961
Strand: Direct
Name: cheB2
Synonym: CHY_1031
Alternate gene names: 78043599
Gene position: 911897-912961 (Clockwise)
Preceding gene: 78044189
Following gene: 78043687
Centisome position: 37.97
GC content: 44.41
Gene sequence:
>1065_bases TTGTCCAAAATTAGAGTTTTGATAGTCGACGATTCAGCGTTAATGCGCAAATATTTGCGGGAAATCCTGGAACAGGACCC GGAAATAGAGGTAATAGCTGTTGCACGGAACGGACGGGAAGCAGTGGAGAAAGCTTTAGAATTGTCTCCGGATGTCATTA CTATGGATATCAACATGCCGGAGATGGATGGTTTAACGGCTATCCAATATATTATGCTTCACCGTCCTACTCCGATTATT GTTATTTCCTCATTAACGCAAAAGGGAGCATTAACAACCTTTGAAGCTTTGGAACTGGGTGCCGTCGATTACGTGGCCAA GCCCGACGGCACCGTTTCCTTAAAAATTAAGGAAGTTGCCGAAGAAATATTACAAAAAGTAAAGGCAGTAGCAAAATCTC GCGGCGTTGTTCGCTTAAAAGCGCGCAAAGAGCGGCCTTTTGTTCAAGAGGTTCCAAAAACTAGGCCGGTTAGCCCCGAT ACTAGTTTTAAAAAATTAATCTTGATTGGGGTATCTACCGGTGGGCCTAAAGCTTTAATGGAAATAATTCCAAGACTTCC GGGGAATTTAGATGCGTCTGTAGTTATTATTCAGCACATGCCGGAGAAATTTACCGCGTCCTTTGCTGCACGCTTAAATA ATTATTCGGAACTTTACGTGAAAGAAGCAGAAGACGGAGAAAGCCTAGAGCGGGGTAAGGTTTTGGTAGCTCGCGGAGGA ATTAATCTCAAGTTAGAACGTAAACTTGGCATCAATGTTGTACGGGTGCGCTATACCCCTCTTCCCCGGGAAACAATTTA CTGGCCGTCGGTGGATGTTGCCTTTCGTTCTGCTTTAACCGTAATTGAACCGCACAGAATAATTGCAGTTTTACTTACCG GTATGGGGGATGATGGAGCTCAAGCTATGGTAGAAATTAAACAAAAAGGCGGTTATACCATAGCTGAAAGTGAAGAGACA GCAGTAGTTTGGGGAATGCCCCGGGAAGCTATTGAACGGGGTGGAGCTTCAGAAATCTTGCCGGTGTATCAAATTGCTGA CCGTATAGTAGAGTTGGTTCGGTAA
Upstream 100 bases:
>100_bases ATTGCTAAGATAAACGGTGGAGAACGTTTAATTCTGCTGCTGGATCTCAAGCATGTAATTAGCCGGGAAGAAAAAGAACA AATTGAGGAGGCATTAGATA
Downstream 100 bases:
>100_bases AAGAGGTGGCTGCATGAAAGTTTTAATCGTTGATGATTCCTTTACTGTTCGACAGTATTTTAAGGAAATTTTTCAAGGAT TTAGTTGGGAAGTAGAAGAA
Product: protein-glutamate methylesterase CheB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MSKIRVLIVDDSALMRKYLREILEQDPEIEVIAVARNGREAVEKALELSPDVITMDINMPEMDGLTAIQYIMLHRPTPII VISSLTQKGALTTFEALELGAVDYVAKPDGTVSLKIKEVAEEILQKVKAVAKSRGVVRLKARKERPFVQEVPKTRPVSPD TSFKKLILIGVSTGGPKALMEIIPRLPGNLDASVVIIQHMPEKFTASFAARLNNYSELYVKEAEDGESLERGKVLVARGG INLKLERKLGINVVRVRYTPLPRETIYWPSVDVAFRSALTVIEPHRIIAVLLTGMGDDGAQAMVEIKQKGGYTIAESEET AVVWGMPREAIERGGASEILPVYQIADRIVELVR
Sequences:
>Translated_354_residues MSKIRVLIVDDSALMRKYLREILEQDPEIEVIAVARNGREAVEKALELSPDVITMDINMPEMDGLTAIQYIMLHRPTPII VISSLTQKGALTTFEALELGAVDYVAKPDGTVSLKIKEVAEEILQKVKAVAKSRGVVRLKARKERPFVQEVPKTRPVSPD TSFKKLILIGVSTGGPKALMEIIPRLPGNLDASVVIIQHMPEKFTASFAARLNNYSELYVKEAEDGESLERGKVLVARGG INLKLERKLGINVVRVRYTPLPRETIYWPSVDVAFRSALTVIEPHRIIAVLLTGMGDDGAQAMVEIKQKGGYTIAESEET AVVWGMPREAIERGGASEILPVYQIADRIVELVR >Mature_353_residues SKIRVLIVDDSALMRKYLREILEQDPEIEVIAVARNGREAVEKALELSPDVITMDINMPEMDGLTAIQYIMLHRPTPIIV ISSLTQKGALTTFEALELGAVDYVAKPDGTVSLKIKEVAEEILQKVKAVAKSRGVVRLKARKERPFVQEVPKTRPVSPDT SFKKLILIGVSTGGPKALMEIIPRLPGNLDASVVIIQHMPEKFTASFAARLNNYSELYVKEAEDGESLERGKVLVARGGI NLKLERKLGINVVRVRYTPLPRETIYWPSVDVAFRSALTVIEPHRIIAVLLTGMGDDGAQAMVEIKQKGGYTIAESEETA VVWGMPREAIERGGASEILPVYQIADRIVELVR
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain
Homologues:
Organism=Escherichia coli, GI1788192, Length=350, Percent_Identity=41.1428571428571, Blast_Score=242, Evalue=3e-65, Organism=Escherichia coli, GI1788550, Length=106, Percent_Identity=40.5660377358491, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1788521, Length=104, Percent_Identity=36.5384615384615, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI87082052, Length=108, Percent_Identity=37.962962962963, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CHEB2_CARHZ (Q3ADA6)
Other databases:
- EMBL: CP000141 - RefSeq: YP_359878.1 - ProteinModelPortal: Q3ADA6 - SMR: Q3ADA6 - STRING: Q3ADA6 - GeneID: 3728752 - GenomeReviews: CP000141_GR - KEGG: chy:CHY_1031 - NMPDR: fig|246194.3.peg.785 - TIGR: CHY_1031 - eggNOG: COG2201 - HOGENOM: HBG705324 - OMA: PADFPWP - ProtClustDB: CLSK569149 - BioCyc: CHYD246194:CHY_1031-MONOMER - GO: GO:0005737 - GO: GO:0006935 - HAMAP: MF_00099 - InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 - Gene3D: G3DSA:3.40.50.180 - PIRSF: PIRSF000876 - SMART: SM00448
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg; SSF52738 Chemotax_RR_pGlu_Me-esterase; SSF52172 CheY_like
EC number: =3.1.1.61
Molecular weight: Translated: 39156; Mature: 39025
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: PS50122 CHEB; PS50110 RESPONSE_REGULATORY; PS00120 LIPASE_SER
Important sites: ACT_SITE 172-172 ACT_SITE 199-199 ACT_SITE 298-298
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIRVLIVDDSALMRKYLREILEQDPEIEVIAVARNGREAVEKALELSPDVITMDINMP CCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCEEEEECCCC EMDGLTAIQYIMLHRPTPIIVISSLTQKGALTTFEALELGAVDYVAKPDGTVSLKIKEVA CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCEEEEECCCCEEEEEHHHHH EEILQKVKAVAKSRGVVRLKARKERPFVQEVPKTRPVSPDTSFKKLILIGVSTGGPKALM HHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCEEEEEEEECCCCHHHHH EIIPRLPGNLDASVVIIQHMPEKFTASFAARLNNYSELYVKEAEDGESLERGKVLVARGG HHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHCCEEEEECC INLKLERKLGINVVRVRYTPLPRETIYWPSVDVAFRSALTVIEPHRIIAVLLTGMGDDGA CCEEEEECCCCEEEEEEECCCCCCEEECCCHHHHHHHHHHHCCCHHEEEEEEECCCCCHH QAMVEIKQKGGYTIAESEETAVVWGMPREAIERGGASEILPVYQIADRIVELVR HHHHHHHHCCCEEEECCCCCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHC >Mature Secondary Structure SKIRVLIVDDSALMRKYLREILEQDPEIEVIAVARNGREAVEKALELSPDVITMDINMP CCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCEEEEECCCC EMDGLTAIQYIMLHRPTPIIVISSLTQKGALTTFEALELGAVDYVAKPDGTVSLKIKEVA CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCEEEEECCCCEEEEEHHHHH EEILQKVKAVAKSRGVVRLKARKERPFVQEVPKTRPVSPDTSFKKLILIGVSTGGPKALM HHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCEEEEEEEECCCCHHHHH EIIPRLPGNLDASVVIIQHMPEKFTASFAARLNNYSELYVKEAEDGESLERGKVLVARGG HHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHCCEEEEECC INLKLERKLGINVVRVRYTPLPRETIYWPSVDVAFRSALTVIEPHRIIAVLLTGMGDDGA CCEEEEECCCCEEEEEEECCCCCCEEECCCHHHHHHHHHHHCCCHHEEEEEEECCCCCHH QAMVEIKQKGGYTIAESEETAVVWGMPREAIERGGASEILPVYQIADRIVELVR HHHHHHHHCCCEEEECCCCCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA