Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is 78043377
Identifier: 78043377
GI number: 78043377
Start: 996535
End: 997152
Strand: Direct
Name: 78043377
Synonym: CHY_1123
Alternate gene names: NA
Gene position: 996535-997152 (Clockwise)
Preceding gene: 78044914
Following gene: 78045086
Centisome position: 41.5
GC content: 40.45
Gene sequence:
>618_bases TTGTTTAAGGTGAATTTTATGGTGAAAAAAGCTAAAATGCGCCTTTGGCTGATGTTGGGCTTAACTTTTTGGGTATTGGC CTCCTGGTTTATTTTAAATATCATCCATTTTAAAAGTTTGAGCAGCACCGGGGGATTTTCCAGTCTTCCAAGACCGATAG GACGGGAACCGGTACTGGTAACCACCATAGGGCAGGGTATCGATGGTCTGTTGGTGAGTGAGTATTTTCGTGATTTGCAT GCCTTTACCACCTTTCGACAGAAGGCCGATGTGGACGATCTACGTGATATGCATACTCTTGTTTTGGTTGTTGGTACCGA ATTTTCAACCTATCAAGGGGTGTATAAACAATTTCAAGAAGAGTTAGCCCGAGAACAGAGGTTAATAGCTAAAGCCAAAC AGCTTAAAATTCCGATTGTATTGGTCTGTTTAAGAAATTACCATAATCAAAACCGTTATGATCGGGCTTTATTTGCTAAA GCTCTTTTGGCAAGCGATTATGTGCTTTTAGTTGGGAACCGGGCAATGGATGGGCTTGTTAATGGATACAACGGATATTA CACCAGGGTATTACGCTTTCGCGATTTGAAAGTACCATTAAATAGTATTTTAAGGTAA
Upstream 100 bases:
>100_bases TTTCGTATACCAATGTTGCCCCAAATAAGGTCGTTAAATTTATCAAATACCGTTGCCATTGTGGTTTACGAAGCTTTGCG TCAATTGCAGTTTCCAGATT
Downstream 100 bases:
>100_bases CGGTGGGAAAATGAAGCAAAAAATTATAAAAAAAATATTTTTAGTAACTTTGATCGTTGCTGCCATTCTTTTACCCCATG AAGCCACCACTTTGGCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MFKVNFMVKKAKMRLWLMLGLTFWVLASWFILNIIHFKSLSSTGGFSSLPRPIGREPVLVTTIGQGIDGLLVSEYFRDLH AFTTFRQKADVDDLRDMHTLVLVVGTEFSTYQGVYKQFQEELAREQRLIAKAKQLKIPIVLVCLRNYHNQNRYDRALFAK ALLASDYVLLVGNRAMDGLVNGYNGYYTRVLRFRDLKVPLNSILR
Sequences:
>Translated_205_residues MFKVNFMVKKAKMRLWLMLGLTFWVLASWFILNIIHFKSLSSTGGFSSLPRPIGREPVLVTTIGQGIDGLLVSEYFRDLH AFTTFRQKADVDDLRDMHTLVLVVGTEFSTYQGVYKQFQEELAREQRLIAKAKQLKIPIVLVCLRNYHNQNRYDRALFAK ALLASDYVLLVGNRAMDGLVNGYNGYYTRVLRFRDLKVPLNSILR >Mature_205_residues MFKVNFMVKKAKMRLWLMLGLTFWVLASWFILNIIHFKSLSSTGGFSSLPRPIGREPVLVTTIGQGIDGLLVSEYFRDLH AFTTFRQKADVDDLRDMHTLVLVVGTEFSTYQGVYKQFQEELAREQRLIAKAKQLKIPIVLVCLRNYHNQNRYDRALFAK ALLASDYVLLVGNRAMDGLVNGYNGYYTRVLRFRDLKVPLNSILR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23685; Mature: 23685
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKVNFMVKKAKMRLWLMLGLTFWVLASWFILNIIHFKSLSSTGGFSSLPRPIGREPVLV CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE TTIGQGIDGLLVSEYFRDLHAFTTFRQKADVDDLRDMHTLVLVVGTEFSTYQGVYKQFQE EECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHH ELAREQRLIAKAKQLKIPIVLVCLRNYHNQNRYDRALFAKALLASDYVLLVGNRAMDGLV HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHH NGYNGYYTRVLRFRDLKVPLNSILR CCCCHHHHHHHHHHCCCCCHHHHCC >Mature Secondary Structure MFKVNFMVKKAKMRLWLMLGLTFWVLASWFILNIIHFKSLSSTGGFSSLPRPIGREPVLV CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE TTIGQGIDGLLVSEYFRDLHAFTTFRQKADVDDLRDMHTLVLVVGTEFSTYQGVYKQFQE EECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHH ELAREQRLIAKAKQLKIPIVLVCLRNYHNQNRYDRALFAKALLASDYVLLVGNRAMDGLV HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHH NGYNGYYTRVLRFRDLKVPLNSILR CCCCHHHHHHHHHHCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA