Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

Click here to switch to the map view.

The map label for this gene is 78043377

Identifier: 78043377

GI number: 78043377

Start: 996535

End: 997152

Strand: Direct

Name: 78043377

Synonym: CHY_1123

Alternate gene names: NA

Gene position: 996535-997152 (Clockwise)

Preceding gene: 78044914

Following gene: 78045086

Centisome position: 41.5

GC content: 40.45

Gene sequence:

>618_bases
TTGTTTAAGGTGAATTTTATGGTGAAAAAAGCTAAAATGCGCCTTTGGCTGATGTTGGGCTTAACTTTTTGGGTATTGGC
CTCCTGGTTTATTTTAAATATCATCCATTTTAAAAGTTTGAGCAGCACCGGGGGATTTTCCAGTCTTCCAAGACCGATAG
GACGGGAACCGGTACTGGTAACCACCATAGGGCAGGGTATCGATGGTCTGTTGGTGAGTGAGTATTTTCGTGATTTGCAT
GCCTTTACCACCTTTCGACAGAAGGCCGATGTGGACGATCTACGTGATATGCATACTCTTGTTTTGGTTGTTGGTACCGA
ATTTTCAACCTATCAAGGGGTGTATAAACAATTTCAAGAAGAGTTAGCCCGAGAACAGAGGTTAATAGCTAAAGCCAAAC
AGCTTAAAATTCCGATTGTATTGGTCTGTTTAAGAAATTACCATAATCAAAACCGTTATGATCGGGCTTTATTTGCTAAA
GCTCTTTTGGCAAGCGATTATGTGCTTTTAGTTGGGAACCGGGCAATGGATGGGCTTGTTAATGGATACAACGGATATTA
CACCAGGGTATTACGCTTTCGCGATTTGAAAGTACCATTAAATAGTATTTTAAGGTAA

Upstream 100 bases:

>100_bases
TTTCGTATACCAATGTTGCCCCAAATAAGGTCGTTAAATTTATCAAATACCGTTGCCATTGTGGTTTACGAAGCTTTGCG
TCAATTGCAGTTTCCAGATT

Downstream 100 bases:

>100_bases
CGGTGGGAAAATGAAGCAAAAAATTATAAAAAAAATATTTTTAGTAACTTTGATCGTTGCTGCCATTCTTTTACCCCATG
AAGCCACCACTTTGGCACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MFKVNFMVKKAKMRLWLMLGLTFWVLASWFILNIIHFKSLSSTGGFSSLPRPIGREPVLVTTIGQGIDGLLVSEYFRDLH
AFTTFRQKADVDDLRDMHTLVLVVGTEFSTYQGVYKQFQEELAREQRLIAKAKQLKIPIVLVCLRNYHNQNRYDRALFAK
ALLASDYVLLVGNRAMDGLVNGYNGYYTRVLRFRDLKVPLNSILR

Sequences:

>Translated_205_residues
MFKVNFMVKKAKMRLWLMLGLTFWVLASWFILNIIHFKSLSSTGGFSSLPRPIGREPVLVTTIGQGIDGLLVSEYFRDLH
AFTTFRQKADVDDLRDMHTLVLVVGTEFSTYQGVYKQFQEELAREQRLIAKAKQLKIPIVLVCLRNYHNQNRYDRALFAK
ALLASDYVLLVGNRAMDGLVNGYNGYYTRVLRFRDLKVPLNSILR
>Mature_205_residues
MFKVNFMVKKAKMRLWLMLGLTFWVLASWFILNIIHFKSLSSTGGFSSLPRPIGREPVLVTTIGQGIDGLLVSEYFRDLH
AFTTFRQKADVDDLRDMHTLVLVVGTEFSTYQGVYKQFQEELAREQRLIAKAKQLKIPIVLVCLRNYHNQNRYDRALFAK
ALLASDYVLLVGNRAMDGLVNGYNGYYTRVLRFRDLKVPLNSILR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23685; Mature: 23685

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKVNFMVKKAKMRLWLMLGLTFWVLASWFILNIIHFKSLSSTGGFSSLPRPIGREPVLV
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
TTIGQGIDGLLVSEYFRDLHAFTTFRQKADVDDLRDMHTLVLVVGTEFSTYQGVYKQFQE
EECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHH
ELAREQRLIAKAKQLKIPIVLVCLRNYHNQNRYDRALFAKALLASDYVLLVGNRAMDGLV
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHH
NGYNGYYTRVLRFRDLKVPLNSILR
CCCCHHHHHHHHHHCCCCCHHHHCC
>Mature Secondary Structure
MFKVNFMVKKAKMRLWLMLGLTFWVLASWFILNIIHFKSLSSTGGFSSLPRPIGREPVLV
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
TTIGQGIDGLLVSEYFRDLHAFTTFRQKADVDDLRDMHTLVLVVGTEFSTYQGVYKQFQE
EECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHH
ELAREQRLIAKAKQLKIPIVLVCLRNYHNQNRYDRALFAKALLASDYVLLVGNRAMDGLV
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHH
NGYNGYYTRVLRFRDLKVPLNSILR
CCCCHHHHHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA