Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is 78043062

Identifier: 78043062

GI number: 78043062

Start: 841392

End: 841949

Strand: Direct

Name: 78043062

Synonym: CHY_0953

Alternate gene names: NA

Gene position: 841392-841949 (Clockwise)

Preceding gene: 78044764

Following gene: 78043751

Centisome position: 35.04

GC content: 41.04

Gene sequence:

>558_bases
ATGTTTGCTCGCTTTATCGACCAAAAAATTGATTATGACGGATCTCAACTTCGACCTCATTTTATCTACGAAAATTTTGG
TTTAATTGGCGATGCGATAATTGCCTTTCGCGGTAAGGCCGAAGTTTCGGATCACCTGGTGGATTTAGAGGATAAAAAGG
AAAACGCTTTTATTTACAGTGAAGACATGCTTCATTTTCTCGTTGAACATTTTGACCAGGATTTGGAAAAGGCGGTTTTA
AGACAGCGGCTTTTGGTGGCCATCATTAAAGAAACTCTGGAAGCTTTAATCGATAAACCAATTGTCCGGATGGGCGATGA
CCTTTATATTGATGACCGGAAACTTTCCGTATCGATTGCTACCAAGTCCCTAGTTTCGACTTTAATTCATACCGGCATAA
ACGTAAAAAGCGATAATGCACCGGTGGCGGCAATTGGTCTTGCGGATTTAGGACTGGAAAGCAGGGTTGAATATCTTGGA
CGCTTAATTGTTCAGCGCTATGGCATGGAAATGGAAGCGATAAATTTGGCAAAGGCTAAGGTAAGAGGAGTTTTTTAA

Upstream 100 bases:

>100_bases
TCCTCTGGACTTAATCTGGAGTTGTTACTACGGCGGAGACGAAATGTGCGGGGTATGTGAAAGCTGTTTAAGGCTAAAAC
GGGCGCGGGGAGGAAATTAA

Downstream 100 bases:

>100_bases
TCCTGAAATCGAGGTGTTTTTTCTTTTATGGCAAATATTGTAGAAATCTTTCCATCACTCCAGGGAGAAGGTTTGTATGC
CGGTGTTTCCACCCTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MFARFIDQKIDYDGSQLRPHFIYENFGLIGDAIIAFRGKAEVSDHLVDLEDKKENAFIYSEDMLHFLVEHFDQDLEKAVL
RQRLLVAIIKETLEALIDKPIVRMGDDLYIDDRKLSVSIATKSLVSTLIHTGINVKSDNAPVAAIGLADLGLESRVEYLG
RLIVQRYGMEMEAINLAKAKVRGVF

Sequences:

>Translated_185_residues
MFARFIDQKIDYDGSQLRPHFIYENFGLIGDAIIAFRGKAEVSDHLVDLEDKKENAFIYSEDMLHFLVEHFDQDLEKAVL
RQRLLVAIIKETLEALIDKPIVRMGDDLYIDDRKLSVSIATKSLVSTLIHTGINVKSDNAPVAAIGLADLGLESRVEYLG
RLIVQRYGMEMEAINLAKAKVRGVF
>Mature_185_residues
MFARFIDQKIDYDGSQLRPHFIYENFGLIGDAIIAFRGKAEVSDHLVDLEDKKENAFIYSEDMLHFLVEHFDQDLEKAVL
RQRLLVAIIKETLEALIDKPIVRMGDDLYIDDRKLSVSIATKSLVSTLIHTGINVKSDNAPVAAIGLADLGLESRVEYLG
RLIVQRYGMEMEAINLAKAKVRGVF

Specific function: Unknown

COG id: COG2029

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007162
- ProDom:   PD022700 [H]

Pfam domain/function: PF04017 DUF366 [H]

EC number: NA

Molecular weight: Translated: 20925; Mature: 20925

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFARFIDQKIDYDGSQLRPHFIYENFGLIGDAIIAFRGKAEVSDHLVDLEDKKENAFIYS
CCHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCEEEH
EDMLHFLVEHFDQDLEKAVLRQRLLVAIIKETLEALIDKPIVRMGDDLYIDDRKLSVSIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCEEEEHHH
TKSLVSTLIHTGINVKSDNAPVAAIGLADLGLESRVEYLGRLIVQRYGMEMEAINLAKAK
HHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VRGVF
HHCCC
>Mature Secondary Structure
MFARFIDQKIDYDGSQLRPHFIYENFGLIGDAIIAFRGKAEVSDHLVDLEDKKENAFIYS
CCHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCEEEH
EDMLHFLVEHFDQDLEKAVLRQRLLVAIIKETLEALIDKPIVRMGDDLYIDDRKLSVSIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCEEEEHHH
TKSLVSTLIHTGINVKSDNAPVAAIGLADLGLESRVEYLGRLIVQRYGMEMEAINLAKAK
HHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VRGVF
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]