| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78043062
Identifier: 78043062
GI number: 78043062
Start: 841392
End: 841949
Strand: Direct
Name: 78043062
Synonym: CHY_0953
Alternate gene names: NA
Gene position: 841392-841949 (Clockwise)
Preceding gene: 78044764
Following gene: 78043751
Centisome position: 35.04
GC content: 41.04
Gene sequence:
>558_bases ATGTTTGCTCGCTTTATCGACCAAAAAATTGATTATGACGGATCTCAACTTCGACCTCATTTTATCTACGAAAATTTTGG TTTAATTGGCGATGCGATAATTGCCTTTCGCGGTAAGGCCGAAGTTTCGGATCACCTGGTGGATTTAGAGGATAAAAAGG AAAACGCTTTTATTTACAGTGAAGACATGCTTCATTTTCTCGTTGAACATTTTGACCAGGATTTGGAAAAGGCGGTTTTA AGACAGCGGCTTTTGGTGGCCATCATTAAAGAAACTCTGGAAGCTTTAATCGATAAACCAATTGTCCGGATGGGCGATGA CCTTTATATTGATGACCGGAAACTTTCCGTATCGATTGCTACCAAGTCCCTAGTTTCGACTTTAATTCATACCGGCATAA ACGTAAAAAGCGATAATGCACCGGTGGCGGCAATTGGTCTTGCGGATTTAGGACTGGAAAGCAGGGTTGAATATCTTGGA CGCTTAATTGTTCAGCGCTATGGCATGGAAATGGAAGCGATAAATTTGGCAAAGGCTAAGGTAAGAGGAGTTTTTTAA
Upstream 100 bases:
>100_bases TCCTCTGGACTTAATCTGGAGTTGTTACTACGGCGGAGACGAAATGTGCGGGGTATGTGAAAGCTGTTTAAGGCTAAAAC GGGCGCGGGGAGGAAATTAA
Downstream 100 bases:
>100_bases TCCTGAAATCGAGGTGTTTTTTCTTTTATGGCAAATATTGTAGAAATCTTTCCATCACTCCAGGGAGAAGGTTTGTATGC CGGTGTTTCCACCCTTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MFARFIDQKIDYDGSQLRPHFIYENFGLIGDAIIAFRGKAEVSDHLVDLEDKKENAFIYSEDMLHFLVEHFDQDLEKAVL RQRLLVAIIKETLEALIDKPIVRMGDDLYIDDRKLSVSIATKSLVSTLIHTGINVKSDNAPVAAIGLADLGLESRVEYLG RLIVQRYGMEMEAINLAKAKVRGVF
Sequences:
>Translated_185_residues MFARFIDQKIDYDGSQLRPHFIYENFGLIGDAIIAFRGKAEVSDHLVDLEDKKENAFIYSEDMLHFLVEHFDQDLEKAVL RQRLLVAIIKETLEALIDKPIVRMGDDLYIDDRKLSVSIATKSLVSTLIHTGINVKSDNAPVAAIGLADLGLESRVEYLG RLIVQRYGMEMEAINLAKAKVRGVF >Mature_185_residues MFARFIDQKIDYDGSQLRPHFIYENFGLIGDAIIAFRGKAEVSDHLVDLEDKKENAFIYSEDMLHFLVEHFDQDLEKAVL RQRLLVAIIKETLEALIDKPIVRMGDDLYIDDRKLSVSIATKSLVSTLIHTGINVKSDNAPVAAIGLADLGLESRVEYLG RLIVQRYGMEMEAINLAKAKVRGVF
Specific function: Unknown
COG id: COG2029
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007162 - ProDom: PD022700 [H]
Pfam domain/function: PF04017 DUF366 [H]
EC number: NA
Molecular weight: Translated: 20925; Mature: 20925
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFARFIDQKIDYDGSQLRPHFIYENFGLIGDAIIAFRGKAEVSDHLVDLEDKKENAFIYS CCHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCEEEH EDMLHFLVEHFDQDLEKAVLRQRLLVAIIKETLEALIDKPIVRMGDDLYIDDRKLSVSIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCEEEEHHH TKSLVSTLIHTGINVKSDNAPVAAIGLADLGLESRVEYLGRLIVQRYGMEMEAINLAKAK HHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VRGVF HHCCC >Mature Secondary Structure MFARFIDQKIDYDGSQLRPHFIYENFGLIGDAIIAFRGKAEVSDHLVDLEDKKENAFIYS CCHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCEEEH EDMLHFLVEHFDQDLEKAVLRQRLLVAIIKETLEALIDKPIVRMGDDLYIDDRKLSVSIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCEEEEHHH TKSLVSTLIHTGINVKSDNAPVAAIGLADLGLESRVEYLGRLIVQRYGMEMEAINLAKAK HHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VRGVF HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]