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The map label for this gene is xylJ [H]

Identifier: 78042951

GI number: 78042951

Start: 1138326

End: 1139114

Strand: Direct

Name: xylJ [H]

Synonym: CHY_1278

Alternate gene names: 78042951

Gene position: 1138326-1139114 (Clockwise)

Preceding gene: 78044017

Following gene: 78042871

Centisome position: 47.4

GC content: 40.05

Gene sequence:

>789_bases
ATGGATAAAACTGCTTTACAAGTAGCAGCGGAAGCGCTCTGGAAAGCCTGTCAAGAAAGAAAAGCATTAGAACAGCCTTT
AACGGAAATTTATCCTGATATTACTATTACGGATGCTTACCAGATTCAGTTAATTAATGTAGACAAGAAAAAAGCTCTGG
GACGTAAAGTTGTTGGTAAAAAAATAGGTTTAACCAGCCGGGCAATGCAGCAAATGTTAGGAGTTCATGAGCCGGATTAC
GGGCATGTAACTGATGACATGATTGGCGATGAAGAGGTTGCTATTTCTCGTTCCAAATTATTGCAACCCAAAATTGAAGC
GGAAATTGCTTTTGTTTTAAAGGACAGGCTTGTAGGTCCTGGAGTTACTTTAACGAAAGTATTGCAAGCGACAGCAGGAG
TAATTCCAGTATTTGAAATAATTGATAGCCGGATTAAAGACTGGAAGATTAAGATTCAGGATACTATTGCCGATAATGCT
TCCAGTGCGATGGTTGTTTTAGGAAGTAAATTAATACCGGTAGATCAGGTTAATCTTAAATATGTTGGGTTAGTATTAGA
AAAAAATGGAGAGATTATTGATACCGCGGCCGGAGCTGCGGTTTTAGGGCACCCTGCATTAGCTGTTGCCTGGCTTGCCA
ATAAACTTTCCGAGTTTGGTATTGCCTTGGAACCGGGGGAGATTATTTTATCCGGTTCGCTGACTAAAGCGTATGAAGTT
ACCGGTAATGACCATTTTGTTGCCAATTTCGGGCCTCTTGGTTCGGTTAAAGTAAAATTTACTGATTAA

Upstream 100 bases:

>100_bases
GCAAGGAAGAAATTGCCCAGGAAATTGCCGGTGTTTTGCGGGCTAAATTGCAAGCGGCAGGTTTTAAACATCATTAAAAT
AAATTAAGAGGAGGGAGAAT

Downstream 100 bases:

>100_bases
CGATTAAAAATTAATACGGCAAAGGAGTGAAGCAAATGTCGAACAAAATTAAAGCTGCCATTATCGGTCCTGGCAATATC
GGGATGGATTTAATGTTTAA

Product: hydratase/decarboxylase family protein

Products: 2-oxopent-4-enoate; H2O

Alternate protein names: HPH; 2-oxopent-4-enoate hydratase [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MDKTALQVAAEALWKACQERKALEQPLTEIYPDITITDAYQIQLINVDKKKALGRKVVGKKIGLTSRAMQQMLGVHEPDY
GHVTDDMIGDEEVAISRSKLLQPKIEAEIAFVLKDRLVGPGVTLTKVLQATAGVIPVFEIIDSRIKDWKIKIQDTIADNA
SSAMVVLGSKLIPVDQVNLKYVGLVLEKNGEIIDTAAGAAVLGHPALAVAWLANKLSEFGIALEPGEIILSGSLTKAYEV
TGNDHFVANFGPLGSVKVKFTD

Sequences:

>Translated_262_residues
MDKTALQVAAEALWKACQERKALEQPLTEIYPDITITDAYQIQLINVDKKKALGRKVVGKKIGLTSRAMQQMLGVHEPDY
GHVTDDMIGDEEVAISRSKLLQPKIEAEIAFVLKDRLVGPGVTLTKVLQATAGVIPVFEIIDSRIKDWKIKIQDTIADNA
SSAMVVLGSKLIPVDQVNLKYVGLVLEKNGEIIDTAAGAAVLGHPALAVAWLANKLSEFGIALEPGEIILSGSLTKAYEV
TGNDHFVANFGPLGSVKVKFTD
>Mature_262_residues
MDKTALQVAAEALWKACQERKALEQPLTEIYPDITITDAYQIQLINVDKKKALGRKVVGKKIGLTSRAMQQMLGVHEPDY
GHVTDDMIGDEEVAISRSKLLQPKIEAEIAFVLKDRLVGPGVTLTKVLQATAGVIPVFEIIDSRIKDWKIKIQDTIADNA
SSAMVVLGSKLIPVDQVNLKYVGLVLEKNGEIIDTAAGAAVLGHPALAVAWLANKLSEFGIALEPGEIILSGSLTKAYEV
TGNDHFVANFGPLGSVKVKFTD

Specific function: Conversion of 2-hydroxypent-2,4-dienoate into 4-hydroxy- 2-oxopentanoate [H]

COG id: COG3971

COG function: function code Q; 2-keto-4-pentenoate hydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hydratase/decarboxylase family [H]

Homologues:

Organism=Escherichia coli, GI87081722, Length=262, Percent_Identity=39.3129770992366, Blast_Score=179, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: 4.2.1.80

Molecular weight: Translated: 28311; Mature: 28311

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKTALQVAAEALWKACQERKALEQPLTEIYPDITITDAYQIQLINVDKKKALGRKVVGK
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEECCEEEEEEECCHHHHHHHHHHHH
KIGLTSRAMQQMLGVHEPDYGHVTDDMIGDEEVAISRSKLLQPKIEAEIAFVLKDRLVGP
HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHEEHHHCCCC
GVTLTKVLQATAGVIPVFEIIDSRIKDWKIKIQDTIADNASSAMVVLGSKLIPVDQVNLK
CHHHHHHHHHHCCHHHHHHHHHHHHHCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCEE
YVGLVLEKNGEIIDTAAGAAVLGHPALAVAWLANKLSEFGIALEPGEIILSGSLTKAYEV
EEEEEEECCCCEEECCCCCHHHCCHHHHHHHHHHHHHHCCEEECCCCEEEECCCCEEEEE
TGNDHFVANFGPLGSVKVKFTD
CCCCEEEEECCCCCEEEEEECC
>Mature Secondary Structure
MDKTALQVAAEALWKACQERKALEQPLTEIYPDITITDAYQIQLINVDKKKALGRKVVGK
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEECCEEEEEEECCHHHHHHHHHHHH
KIGLTSRAMQQMLGVHEPDYGHVTDDMIGDEEVAISRSKLLQPKIEAEIAFVLKDRLVGP
HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHEEHHHCCCC
GVTLTKVLQATAGVIPVFEIIDSRIKDWKIKIQDTIADNASSAMVVLGSKLIPVDQVNLK
CHHHHHHHHHHCCHHHHHHHHHHHHHCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCEE
YVGLVLEKNGEIIDTAAGAAVLGHPALAVAWLANKLSEFGIALEPGEIILSGSLTKAYEV
EEEEEEECCCCEEECCCCCHHHCCHHHHHHHHHHHHHHCCEEECCCCEEEECCCCEEEEE
TGNDHFVANFGPLGSVKVKFTD
CCCCEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 4-hydroxy-2-oxopentanoate

Specific reaction: 4-hydroxy-2-oxopentanoate = 2-oxopent-4-enoate + H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1791759 [H]