Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is ytoI [H]

Identifier: 78042899

GI number: 78042899

Start: 1009321

End: 1010628

Strand: Direct

Name: ytoI [H]

Synonym: CHY_1136

Alternate gene names: 78042899

Gene position: 1009321-1010628 (Clockwise)

Preceding gene: 78045079

Following gene: 78044608

Centisome position: 42.03

GC content: 37.69

Gene sequence:

>1308_bases
ATGAGTAATACCAAACATGCAAAATTATTGGCTTATATTCGCAATTTACCTTCCGGTAGCAAAGTGTCGGTAAGATTGTT
AGCCAAAGAATTAAAGGTTAGTGAAGGTACCGCTTACAGGGCAATTAAAGAAGCGGAAGCGGAAGGTTTGGTAAAAACTG
TTCCTAAAGTAGGAACGATTCGCATAACAAATATCGAAAAAAAAGAATTAAAAGATTTAACATTAAATGAAATTATAAAA
ATAACCGAGTCCCATTTGCTGGTGGGGGAAGATTTGTTAAATTACCGTTTTGCAAATTTTTTAATTGGGGCAATGGCTGT
TGAAGCTATCGAAAGATTTTTGGTAGAGGGTTGCTTATTTATCGTAGGCAACCGGGAAGATGCCCAGTTAAAAGCTTTAC
AAAGCGGTGCCCACCTGCTGATAACCGGAGGTTTTCCGGTAAAGACGGAACTTTTAGAACTGGCAAGGGAAAATAATTTA
GCGATATTATCATCACCGTACGATACTTTTACGGTAACGTCGCTTTTGCATCAAGCTTTATATGAGCGCTTAAAAGAAAA
AGAAGTTATAACCGCAAGAGATATTATGGTAAAAAAAGTATTTACCCTTTCTTTAGGGCAAAGGGTGAGGGATTGGCGCC
AATTATTTCTCAATACCGGCCACAGCCGTTTTCCGGTGGTGGATAAGGAAAATCGGGTTTGCGGCATAATCACTGCTACC
GATGTTGCCGGTGCCGGGGAAGACGAGTTAGTGGAAAATTTAATGTCAAAAGATGTTATTTCCGCCAGTCCCGAAACGCC
TATTGGTCATATAGCCAGGGTTATGACCTGGGACAGGATTGATTTGGTTCCGGTTGTGGATGAGTCTTTTAAGTTATTAG
GCATTATTAGCCGCCAAAATATTATTGATGCTTTACAGCGGCTGGAAAGACAACCGCATTTTGGCGAAACTTTAGAAGAT
CTTATTATAAAAAATTTCCATGTTGGTGAGGACGAAAACGGGATATTTTTAGAAGGAAAAATAAATGATTTTTTAATAAA
TGAACTGAGTATGTTAAGTTCCACTGTTCTTTTATCCCTTTCCATTTTTTATGCCAATCTGATGGTGCGAAAAAAAGTTA
AAGCTCCGGTAGTGGTTAATAATTTTTCTTTATCTCTGTTAACTCCCCTAACTTATGGAGAAACCCTTGTAGTTCGGGGT
AAGTTGTTGTACCTGGAAAAAAGAAATGCAAAATTAGAGATAGATTTTTATAGGCAAAGTAACCTGAATGCCAAAGCTTT
AATTGAGGTTCGTTTAATTGAAAAATAA

Upstream 100 bases:

>100_bases
AAAAGAAGTGGAAAAAAAGATGGGGTTTTCTGTAAAAAATCATCGTTTAGAATTTTACGGAGTATGCAGTGATTGCCAGC
AAAAAGTTAGGGTGGATTAA

Downstream 100 bases:

>100_bases
GGCACCCGTCGGAGGTGTCTTTTGGTTTATTATAGGAGGATATGTGTATGAGTTTTGTACATTTGCATACCCATAGCTGT
TACAGTTTATTGGATGGAGC

Product: CBS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MSNTKHAKLLAYIRNLPSGSKVSVRLLAKELKVSEGTAYRAIKEAEAEGLVKTVPKVGTIRITNIEKKELKDLTLNEIIK
ITESHLLVGEDLLNYRFANFLIGAMAVEAIERFLVEGCLFIVGNREDAQLKALQSGAHLLITGGFPVKTELLELARENNL
AILSSPYDTFTVTSLLHQALYERLKEKEVITARDIMVKKVFTLSLGQRVRDWRQLFLNTGHSRFPVVDKENRVCGIITAT
DVAGAGEDELVENLMSKDVISASPETPIGHIARVMTWDRIDLVPVVDESFKLLGIISRQNIIDALQRLERQPHFGETLED
LIIKNFHVGEDENGIFLEGKINDFLINELSMLSSTVLLSLSIFYANLMVRKKVKAPVVVNNFSLSLLTPLTYGETLVVRG
KLLYLEKRNAKLEIDFYRQSNLNAKALIEVRLIEK

Sequences:

>Translated_435_residues
MSNTKHAKLLAYIRNLPSGSKVSVRLLAKELKVSEGTAYRAIKEAEAEGLVKTVPKVGTIRITNIEKKELKDLTLNEIIK
ITESHLLVGEDLLNYRFANFLIGAMAVEAIERFLVEGCLFIVGNREDAQLKALQSGAHLLITGGFPVKTELLELARENNL
AILSSPYDTFTVTSLLHQALYERLKEKEVITARDIMVKKVFTLSLGQRVRDWRQLFLNTGHSRFPVVDKENRVCGIITAT
DVAGAGEDELVENLMSKDVISASPETPIGHIARVMTWDRIDLVPVVDESFKLLGIISRQNIIDALQRLERQPHFGETLED
LIIKNFHVGEDENGIFLEGKINDFLINELSMLSSTVLLSLSIFYANLMVRKKVKAPVVVNNFSLSLLTPLTYGETLVVRG
KLLYLEKRNAKLEIDFYRQSNLNAKALIEVRLIEK
>Mature_434_residues
SNTKHAKLLAYIRNLPSGSKVSVRLLAKELKVSEGTAYRAIKEAEAEGLVKTVPKVGTIRITNIEKKELKDLTLNEIIKI
TESHLLVGEDLLNYRFANFLIGAMAVEAIERFLVEGCLFIVGNREDAQLKALQSGAHLLITGGFPVKTELLELARENNLA
ILSSPYDTFTVTSLLHQALYERLKEKEVITARDIMVKKVFTLSLGQRVRDWRQLFLNTGHSRFPVVDKENRVCGIITATD
VAGAGEDELVENLMSKDVISASPETPIGHIARVMTWDRIDLVPVVDESFKLLGIISRQNIIDALQRLERQPHFGETLEDL
IIKNFHVGEDENGIFLEGKINDFLINELSMLSSTVLLSLSIFYANLMVRKKVKAPVVVNNFSLSLLTPLTYGETLVVRGK
LLYLEKRNAKLEIDFYRQSNLNAKALIEVRLIEK

Specific function: Unknown

COG id: COG4109

COG function: function code K; Predicted transcriptional regulator containing CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR010766
- InterPro:   IPR000524
- InterPro:   IPR006683
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03061 4HBT; PF00571 CBS; PF07085 DRTGG; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 48865; Mature: 48733

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTKHAKLLAYIRNLPSGSKVSVRLLAKELKVSEGTAYRAIKEAEAEGLVKTVPKVGTI
CCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCCEE
RITNIEKKELKDLTLNEIIKITESHLLVGEDLLNYRFANFLIGAMAVEAIERFLVEGCLF
EEECCCHHHHHCCCHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
IVGNREDAQLKALQSGAHLLITGGFPVKTELLELARENNLAILSSPYDTFTVTSLLHQAL
EEECCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHH
YERLKEKEVITARDIMVKKVFTLSLGQRVRDWRQLFLNTGHSRFPVVDKENRVCGIITAT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEEEC
DVAGAGEDELVENLMSKDVISASPETPIGHIARVMTWDRIDLVPVVDESFKLLGIISRQN
CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEECCEEEEEECCCCCCEEEEHHHHH
IIDALQRLERQPHFGETLEDLIIKNFHVGEDENGIFLEGKINDFLINELSMLSSTVLLSL
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
SIFYANLMVRKKVKAPVVVNNFSLSLLTPLTYGETLVVRGKLLYLEKRNAKLEIDFYRQS
HHHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCEEEEEEEEEEEEECCCEEEEEEEECC
NLNAKALIEVRLIEK
CCCEEEEEEEEEECC
>Mature Secondary Structure 
SNTKHAKLLAYIRNLPSGSKVSVRLLAKELKVSEGTAYRAIKEAEAEGLVKTVPKVGTI
CCCHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCCEE
RITNIEKKELKDLTLNEIIKITESHLLVGEDLLNYRFANFLIGAMAVEAIERFLVEGCLF
EEECCCHHHHHCCCHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
IVGNREDAQLKALQSGAHLLITGGFPVKTELLELARENNLAILSSPYDTFTVTSLLHQAL
EEECCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHH
YERLKEKEVITARDIMVKKVFTLSLGQRVRDWRQLFLNTGHSRFPVVDKENRVCGIITAT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEEEC
DVAGAGEDELVENLMSKDVISASPETPIGHIARVMTWDRIDLVPVVDESFKLLGIISRQN
CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEECCEEEEEECCCCCCEEEEHHHHH
IIDALQRLERQPHFGETLEDLIIKNFHVGEDENGIFLEGKINDFLINELSMLSSTVLLSL
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
SIFYANLMVRKKVKAPVVVNNFSLSLLTPLTYGETLVVRGKLLYLEKRNAKLEIDFYRQS
HHHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCEEEEEEEEEEEEECCCEEEEEEEECC
NLNAKALIEVRLIEK
CCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]