| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 77761091
Identifier: 77761091
GI number: 77761091
Start: 617340
End: 618629
Strand: Reverse
Name: 77761091
Synonym: XC_0521
Alternate gene names: NA
Gene position: 618629-617340 (Counterclockwise)
Preceding gene: 66766861
Following gene: 66766859
Centisome position: 12.02
GC content: 73.64
Gene sequence:
>1290_bases ATGTCCGAGACTCCGCCTCCGCGCCGCCCGCTTGCCACGTTCCTGCGTGCGGCCCCGGCCGCCCCGCCGCTGGTCCCGAC CCCGCCCGCGCCTTCGACCGCGCCGGCCGACACCGTAGTGCCTGCCCCCGAGCCCGCGCCGGTGGCAGCGCCGCTGGCCA CGCCCGTTCCGGCGCCGGTACGTCCGTTGCCAGCGCCACCACGCAGCACGGAGGCCGCTCCGCCAGACGCCACTGCACGT GCGCCTGACACCCTGATTGCACCCACACGGCGAGACGCGCCGCTGCCGGCGTCGCCCCTGCCGTTGCCTGCCACGCCACC CGCACCGGTGCCGGCGCATTCGTCTGCACAGACTGCGGACCCGGCCATGCGCCGCAGTGCAGACGACCGGCCCACTGCAG CGGCGGCGATCGCTCCGGCAGTTGTAGCAACGTCTACAGCTCCGTTAGCTCCGGCCGCAGCAGCACACGCAACCAACGCC CCCGACCAACCTGCAATTGCAGCGCAGTCCGCTGCGAGCGCGCCAGGCGCCACAGTCACGCAAACGCCGCAGGCGTCCCC CCCGGCCAATCAAGACGGCCAGCCTGCCCCCGCTGCTCCCCAGGCGGCCCCGGAAGCAGAGGCAGGTGCATCGACCGAGG CCGAGCTGGAAGCAGATCCGGACGACACCGCAACCACGCCCGCCCCCACGTCCACATCGGCATCGGCATCGGCATCGGCA TCCACATCCACATCCACACCAGCGTCGCCATCCTCCTCCCCAACTCCGGCCCCTACGCTGGAACCCGCCTTCGCCCGCCG CGGCCTGGTCCGGCCGCGGCTGCGCGCCAGCGGCTGGCAATGGGCGGTGCTGGTCGGCCTGGTACTGCTGCTGGGCCTGC AGATCGTGATCGCCGACCGCGCGCGCCTGGCCGGCGACGCGCGCTGGCGGCCGCTGGTGAGTGCGGCCTGTGCCGTTGCG CGCTGCGCGCTGCCGCCGTGGCGCGACCCGGCCACGCTGACCCTGCTGACGCGCGACGTGCGCCCGCTGCCCGCCTACCC GGGCGTGCTGCAGATCCAGGCCAGCTTCCGCAACGATGCACGCTGGGCACAGGCCTGGCCGTGGCTGCAGCTGTCGCTGT CCGATGCCGACGGCCGGGTAATCGGCACGCGGGTGTGCAGCCCGCAGGATTATCTGGGCCAGGCGCCCGCCGCGCAGGAC ACGCTGGCGCCCGGCCAAGCGGTGCAGGTGGCGTTTCGCGTCCGCGAACCGGCCGCGAGCACGGCCGCCTTCAGTTTTGA TTTCCGTTGA
Upstream 100 bases:
>100_bases GCATGCACCAGGTGGGTGCCGCAGTCACTGACAGCGGCAGCGGGTTCGCCATGCGGCGCGCGCGTGGTTGAATAGCGGTC TTCCCGCTGCACGCCTGCCG
Downstream 100 bases:
>100_bases GCGGACGCGACCTGAGCGCCACCCCACATGGGCGTGGCGAGCGGTGAGGTCACGCGCTAGACTCACTCCCCCTCGCCGGC CACGCGTCCCGGCTTCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MSETPPPRRPLATFLRAAPAAPPLVPTPPAPSTAPADTVVPAPEPAPVAAPLATPVPAPVRPLPAPPRSTEAAPPDATAR APDTLIAPTRRDAPLPASPLPLPATPPAPVPAHSSAQTADPAMRRSADDRPTAAAAIAPAVVATSTAPLAPAAAAHATNA PDQPAIAAQSAASAPGATVTQTPQASPPANQDGQPAPAAPQAAPEAEAGASTEAELEADPDDTATTPAPTSTSASASASA STSTSTPASPSSSPTPAPTLEPAFARRGLVRPRLRASGWQWAVLVGLVLLLGLQIVIADRARLAGDARWRPLVSAACAVA RCALPPWRDPATLTLLTRDVRPLPAYPGVLQIQASFRNDARWAQAWPWLQLSLSDADGRVIGTRVCSPQDYLGQAPAAQD TLAPGQAVQVAFRVREPAASTAAFSFDFR
Sequences:
>Translated_429_residues MSETPPPRRPLATFLRAAPAAPPLVPTPPAPSTAPADTVVPAPEPAPVAAPLATPVPAPVRPLPAPPRSTEAAPPDATAR APDTLIAPTRRDAPLPASPLPLPATPPAPVPAHSSAQTADPAMRRSADDRPTAAAAIAPAVVATSTAPLAPAAAAHATNA PDQPAIAAQSAASAPGATVTQTPQASPPANQDGQPAPAAPQAAPEAEAGASTEAELEADPDDTATTPAPTSTSASASASA STSTSTPASPSSSPTPAPTLEPAFARRGLVRPRLRASGWQWAVLVGLVLLLGLQIVIADRARLAGDARWRPLVSAACAVA RCALPPWRDPATLTLLTRDVRPLPAYPGVLQIQASFRNDARWAQAWPWLQLSLSDADGRVIGTRVCSPQDYLGQAPAAQD TLAPGQAVQVAFRVREPAASTAAFSFDFR >Mature_428_residues SETPPPRRPLATFLRAAPAAPPLVPTPPAPSTAPADTVVPAPEPAPVAAPLATPVPAPVRPLPAPPRSTEAAPPDATARA PDTLIAPTRRDAPLPASPLPLPATPPAPVPAHSSAQTADPAMRRSADDRPTAAAAIAPAVVATSTAPLAPAAAAHATNAP DQPAIAAQSAASAPGATVTQTPQASPPANQDGQPAPAAPQAAPEAEAGASTEAELEADPDDTATTPAPTSTSASASASAS TSTSTPASPSSSPTPAPTLEPAFARRGLVRPRLRASGWQWAVLVGLVLLLGLQIVIADRARLAGDARWRPLVSAACAVAR CALPPWRDPATLTLLTRDVRPLPAYPGVLQIQASFRNDARWAQAWPWLQLSLSDADGRVIGTRVCSPQDYLGQAPAAQDT LAPGQAVQVAFRVREPAASTAAFSFDFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43476; Mature: 43345
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETPPPRRPLATFLRAAPAAPPLVPTPPAPSTAPADTVVPAPEPAPVAAPLATPVPAPV CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPLPAPPRSTEAAPPDATARAPDTLIAPTRRDAPLPASPLPLPATPPAPVPAHSSAQTAD CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAMRRSADDRPTAAAAIAPAVVATSTAPLAPAAAAHATNAPDQPAIAAQSAASAPGATVT HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCCCEE QTPQASPPANQDGQPAPAAPQAAPEAEAGASTEAELEADPDDTATTPAPTSTSASASASA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC STSTSTPASPSSSPTPAPTLEPAFARRGLVRPRLRASGWQWAVLVGLVLLLGLQIVIADR CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHEEHHH ARLAGDARWRPLVSAACAVARCALPPWRDPATLTLLTRDVRPLPAYPGVLQIQASFRNDA HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCC RWAQAWPWLQLSLSDADGRVIGTRVCSPQDYLGQAPAAQDTLAPGQAVQVAFRVREPAAS CHHHCCCEEEEEECCCCCEEEEEEECCCHHHHCCCCCCHHHCCCCHHEEEEEEECCCCCC TAAFSFDFR CEEEEECCC >Mature Secondary Structure SETPPPRRPLATFLRAAPAAPPLVPTPPAPSTAPADTVVPAPEPAPVAAPLATPVPAPV CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPLPAPPRSTEAAPPDATARAPDTLIAPTRRDAPLPASPLPLPATPPAPVPAHSSAQTAD CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAMRRSADDRPTAAAAIAPAVVATSTAPLAPAAAAHATNAPDQPAIAAQSAASAPGATVT HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCCCEE QTPQASPPANQDGQPAPAAPQAAPEAEAGASTEAELEADPDDTATTPAPTSTSASASASA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC STSTSTPASPSSSPTPAPTLEPAFARRGLVRPRLRASGWQWAVLVGLVLLLGLQIVIADR CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHEEHHH ARLAGDARWRPLVSAACAVARCALPPWRDPATLTLLTRDVRPLPAYPGVLQIQASFRNDA HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCC RWAQAWPWLQLSLSDADGRVIGTRVCSPQDYLGQAPAAQDTLAPGQAVQVAFRVREPAAS CHHHCCCEEEEEECCCCCEEEEEEECCCHHHHCCCCCCHHHCCCCHHEEEEEEECCCCCC TAAFSFDFR CEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA