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The map label for this gene is blc [H]

Identifier: 77748770

GI number: 77748770

Start: 5029399

End: 5029932

Strand: Direct

Name: blc [H]

Synonym: XAC4259

Alternate gene names: 77748770

Gene position: 5029399-5029932 (Clockwise)

Preceding gene: 21244975

Following gene: 21244979

Centisome position: 97.18

GC content: 62.55

Gene sequence:

>534_bases
ATGCGAGGTGGTTCGATGCTGTTGTTGCTGACCTTAGCGGTCTACGGAAGTGCAAGTGGGAGCGAGTCGCGTGCCGCCCT
GCCCCGCGCAGATAGCGTCGATGTGCCGCGCTTCATGGGCGACTGGTACGTCATCGCGCATATTCCGACCCGTCCGGAAC
GCAAGGCCTACGACGCGGTCGAAAGTTACGCGCTGCGACCGGATGGTCGTATCCAGACCACCTTTACCTTTCGCAAGGGC
AGCTTCCAGGCGCCGCTCAAGTCGATGCACCCGATCGGCCAGGTGGCGAAGCAGGGCAATGGCGCGCTCTGGCGCATGCA
GTTCTTCTGGCCGTTCAAGGCCGAGTACGTGATTGCCTGGCTGGATGCGGGGTATACGCAAACCATCGTGGCGCGCAGCA
AGCGCGACTACGTCTGGTACATGGCGCGCACTCCACAGGTCTCAGATACCGACTATCAGCAGGCCGTTCAACGCATTGCC
GCGATGGGCTACGACGTGTCGCAGCTGCGACGTGTGCCGCAGTCGGCACGCTGA

Upstream 100 bases:

>100_bases
TCATCGTGCGCCCAGTCCGGAACTGCATCGCATGGGGTTGCATCCGGACGCGCCGCAACGCCGTAGGCCTGTCTACGGAT
TCTTTCAGGTGGAGGTTGCC

Downstream 100 bases:

>100_bases
TGCGGAACCGCCCATGGGGAATCTGCACGCCGTGCAGTCCTCCAGCCGGCCAAGCGCATCAGGCGTCTTTCGTGTCCACA
GAAAATTCCCATCCATCGTT

Product: lipocalin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MRGGSMLLLLTLAVYGSASGSESRAALPRADSVDVPRFMGDWYVIAHIPTRPERKAYDAVESYALRPDGRIQTTFTFRKG
SFQAPLKSMHPIGQVAKQGNGALWRMQFFWPFKAEYVIAWLDAGYTQTIVARSKRDYVWYMARTPQVSDTDYQQAVQRIA
AMGYDVSQLRRVPQSAR

Sequences:

>Translated_177_residues
MRGGSMLLLLTLAVYGSASGSESRAALPRADSVDVPRFMGDWYVIAHIPTRPERKAYDAVESYALRPDGRIQTTFTFRKG
SFQAPLKSMHPIGQVAKQGNGALWRMQFFWPFKAEYVIAWLDAGYTQTIVARSKRDYVWYMARTPQVSDTDYQQAVQRIA
AMGYDVSQLRRVPQSAR
>Mature_177_residues
MRGGSMLLLLTLAVYGSASGSESRAALPRADSVDVPRFMGDWYVIAHIPTRPERKAYDAVESYALRPDGRIQTTFTFRKG
SFQAPLKSMHPIGQVAKQGNGALWRMQFFWPFKAEYVIAWLDAGYTQTIVARSKRDYVWYMARTPQVSDTDYQQAVQRIA
AMGYDVSQLRRVPQSAR

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Escherichia coli, GI1790592, Length=147, Percent_Identity=30.6122448979592, Blast_Score=71, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 20063; Mature: 20063

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGGSMLLLLTLAVYGSASGSESRAALPRADSVDVPRFMGDWYVIAHIPTRPERKAYDAV
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHH
ESYALRPDGRIQTTFTFRKGSFQAPLKSMHPIGQVAKQGNGALWRMQFFWPFKAEYVIAW
HHHCCCCCCCEEEEEEEECCCCCCCHHHCCHHHHHHHCCCCEEEEEEEECCCCCEEEEEE
LDAGYTQTIVARSKRDYVWYMARTPQVSDTDYQQAVQRIAAMGYDVSQLRRVPQSAR
ECCCCHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MRGGSMLLLLTLAVYGSASGSESRAALPRADSVDVPRFMGDWYVIAHIPTRPERKAYDAV
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHH
ESYALRPDGRIQTTFTFRKGSFQAPLKSMHPIGQVAKQGNGALWRMQFFWPFKAEYVIAW
HHHCCCCCCCEEEEEEEECCCCCCCHHHCCHHHHHHHCCCCEEEEEEEECCCCCEEEEEE
LDAGYTQTIVARSKRDYVWYMARTPQVSDTDYQQAVQRIAAMGYDVSQLRRVPQSAR
ECCCCHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]